KEGG   Pantoea sp. At-9b: Pat9b_3183
Entry
Pat9b_3183        CDS       T01386                                 
Name
(GenBank) glycine dehydrogenase
  KO
K00281  glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
Organism
pao  Pantoea sp. At-9b
Pathway
pao00260  Glycine, serine and threonine metabolism
pao00630  Glyoxylate and dicarboxylate metabolism
pao00785  Lipoic acid metabolism
pao01100  Metabolic pathways
pao01110  Biosynthesis of secondary metabolites
pao01200  Carbon metabolism
Module
pao_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:pao00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00630 Glyoxylate and dicarboxylate metabolism
    Pat9b_3183
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    Pat9b_3183
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    Pat9b_3183
Enzymes [BR:pao01000]
 1. Oxidoreductases
  1.4  Acting on the CH-NH2 group of donors
   1.4.4  With a disulfide as acceptor
    1.4.4.2  glycine dehydrogenase (aminomethyl-transferring)
     Pat9b_3183
SSDB
Motif
Pfam: GDC-P GcvP2_C Beta_elim_lyase
Other DBs
NCBI-ProteinID: ADU70479
UniProt: E6WGS0
Position
complement(3499430..3502303)
AA seq 957 aa
MTQTLSQLEHNGAFIERHIGPTPEQQATMLEAIGASSLESLIGSIVPADIQLPGPPAVGD
AATEQQALAELKAIASQNQRYKSWIGMGYTAVITPPVILRNMLENPGWYTAYTPYQPEVS
QGRLEALLNFQTLTLDLTGLDIASASLLDEATAAAEAMAMAKRVSKLKNANKFFIADDIH
PQTLDVVRTRAETFGFELIIDNPAKALDHDDLFGVLLQQAGTTGEVHDYRSLIAELKSRK
VVVSVASDFMALVQLEAPGKQGADIVFGSAQRFGVPMGYGGPHAAFFASRDEHKRSMPGR
IIGVSRDAAGNTALRMAMQTREQHIRREKANSNICTSQVLLANIAGFYAVYHGPAGLKRI
ASRIHRLTSILATGLQNGGLKLRHNSWFDTLTVEVADKAAVLNRALSFGVNLRSDIHNAV
GITLDETTRREDIQALFAILLGDAHGLDIDALDSVVAAENSGIPAGQQRQSAILEHPVFN
RHHSETEMMRYMHSLEKKDLALNQAMIPLGSCTMKLNAAAEMIPITWPEFAELHPFCPAE
QASGYLQMIGQLSQWLVQLTGYDALCMQPNSGAQGEYAGLLAIRRYHESRNQGDRHICLI
PSSAHGTNPASAQMAGMSVVVVACDKQGNIDLGDLREKAAQSGDKLSCIMVTYPSTHGVY
EETIREVCQIVHQHGGQVYLDGANMNAQVGITTPGYIGADVSHLNLHKTFCIPHGGGGPG
MGPIGVKAHLAPFVPGHSVVQIDGVLTQQGAVSAAPFGSASILPISWMYIRMMGAEGLKQ
ASSVAILNANYIASRLQSAYPILYTGRDGRVAHECILDIRPLKEQTGISEMDIAKRLIDY
GFHAPTMSFPVAGTLMVEPTESESKIELDRFIDAMLAIRMEIDRVADGEWPAEDNPLVNA
PHTQMEIVGEWAHPYSRELAVFPAGSANKYWPTVKRLDDVFGDRNLFCSCVPMSEYA
NT seq 2874 nt   +upstreamnt  +downstreamnt
atgactcagactctcagccagcttgaacataacggtgcttttattgagcgccatatcgga
cctacgccggagcaacaggccaccatgctggaagcgatcggtgccagctcgctggaatcg
ttgatcggttccatcgtgcctgccgatatccaattgccgggaccgcccgcagtgggtgat
gcggccaccgagcagcaggcgctggcagagctgaaggcgattgccagtcagaaccagcgt
tacaaatcctggattggtatgggctataccgcggtgatcacccctccggtgattctgcgc
aacatgctggaaaacccgggctggtacaccgcttataccccgtaccagccagaagtctcg
cagggtcgtctcgaagccctgttgaacttccagactctgacgctggatctgaccggtctc
gatatcgcatccgcctcgttgctggatgaagccaccgcagctgccgaagcgatggcgatg
gcaaaacgcgtcagtaagctgaaaaatgccaacaaattctttattgccgacgatatccat
ccgcagacgctggatgtggtgcgtacccgtgcggaaacctttggttttgaactgattatc
gataacccagccaaagcgctcgatcatgatgatctgtttggcgtgctgttgcagcaggcg
ggcaccacgggtgaagtgcatgactaccgttcgctgattgccgagctgaaaagccgcaaa
gtggtggtgagtgtcgcctctgattttatggcgctggtacaactggaagcaccgggcaag
cagggcgcagacatcgtgtttggttcagcccagcgtttcggcgtgccgatgggctacggc
ggaccgcacgcggcattttttgccagccgtgacgagcacaaacgctccatgccgggacgt
attattggtgtttcgcgtgatgctgccggtaacaccgcgctgcgtatggcgatgcaaacc
cgtgaacagcatatccgccgtgagaaagccaactccaacatctgtacgtcacaggtgctg
ctggcgaacatcgcgggcttctatgcggtctatcacggaccggctggcctgaagcgtatt
gcgtcacgtatccaccgtctgaccagtatcctggcgaccggactgcaaaatggcggtctg
aaactgcgtcacaatagctggttcgataccctgactgtcgaggtggcagacaaagcggcg
gtgctgaaccgtgcactgagcttcggggtgaacctgcgcagcgacatccataacgcggtg
ggcatcacgctggatgaaaccactcgccgtgaagacattcaggcgctgttcgccattctg
cttggcgatgcgcatggtctcgacattgatgcgctggacagcgtcgtagcggcagaaaac
agtggcattccggcggggcagcaacgtcagagcgccatcctcgaacacccggtattcaac
cgtcatcacagcgaaactgagatgatgcgttatatgcacagcctggagaaaaaggatctg
gcgctgaaccaggcgatgatcccgctgggttcctgcaccatgaaactgaatgcggcagcg
gaaatgattccgatcacctggccggaattcgctgaactgcacccgttctgcccggcagaa
caggcttcgggttatctgcaaatgattggccagttgtcacagtggctggtacagctgacc
ggctacgacgcgctgtgcatgcagccgaactcgggtgcacagggtgaatatgcgggcctg
ctggcgattcgccgctaccacgaaagccgtaaccagggcgatcgccatatctgtctgatc
cccagctctgcacacggcaccaacccggcatcggcacagatggcagggatgtcggtggtg
gtggtggcctgtgacaaacagggcaacatcgacctcggcgatctgcgcgaaaaagcggcg
cagtcgggcgataaactctcctgcatcatggtgacttatccgtcaacgcatggtgtgtat
gaagagaccatccgtgaagtgtgccagatcgtgcatcagcacggcggccaggtttatctt
gatggtgccaatatgaacgctcaggtggggatcaccacgccaggctatatcggcgcggat
gtttcgcatcttaacctgcataaaaccttctgcattccgcacggcggcggtggcccaggt
atgggacctatcggcgtgaaagcgcatctggcaccgtttgttccgggccatagcgtagta
cagattgacggtgtgctgacgcagcaaggtgcggtttctgccgcgccattcggcagcgcc
tcgattctgccgatcagctggatgtacatccgcatgatgggtgccgaagggctgaagcag
gcgagttcggtggcgattcttaatgccaactatatcgccagtcgtttgcagtcagcctat
ccgattctctataccggccgcgatggtcgcgtggcgcacgaatgtattctggatattcgt
ccgctgaaagaacaaaccggtatcagcgaaatggatatcgctaaacgtttgatcgactac
ggtttccatgcaccaaccatgtcgttcccggtggcgggtacgttgatggtggaaccaacg
gaatccgagagcaaaatcgaactggatcgctttatcgatgcgatgctggcgatccgtatg
gaaatcgatcgggtggctgatggtgaatggccggcagaagacaacccgctggtcaatgcc
ccgcatacccagatggagatcgtcggtgagtgggcgcatccatacagccgcgagctggcg
gtgttcccggcaggcagcgctaacaaatactggccgacggtaaaacgtctggatgatgtg
tttggcgatcgcaacctgttctgcagctgcgtacccatgagtgagtatgcataa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (8)   
   KEGG PATHWAY (6)   
   KEGG MODULE (2)   
Chemical substance (10)   
   KEGG COMPOUND (10)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (31)   

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