KEGG   Pantoea sp. At-9b: Pat9b_3906Help
Entry
Pat9b_3906        CDS       T01386                                 

Definition
formamidopyrimidine-DNA glycosylase (EC:3.2.2.23)
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
pao  Pantoea sp. At-9b
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:pao00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    Pat9b_3906
Enzymes [BR:pao01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     Pat9b_3906
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     Pat9b_3906
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
JGI: 
UniProt: 
Position
complement(4265946..4266755)
Genome map
AA seq 269 aa AA seqDB search
MPELPEVETSRRGIEPHMVGETILHAVVRNSRLRWPVSSEIHALSDQPVLSVQRRAKYLL
LELPGGWIIIHLGMSGSLRMLPGELPPAKHDHVDLVMSNGKVLRYTDPRRFGAWLWTNDL
AGSSVLAHLGPEPLSDDFDGNYLFEKSRGKRTVIKQWLMDNKVVVGVGNIYASESLFTAG
IIPDRPAMSLSQAEATLLANTIKAVLLRSIEQGGTTLRDFLQTDGKPGYFAQELQVYGRA
GEPCRACGTPIVSGKHGQRSTFWCPRCQH
NT seq 810 nt NT seq  +upstreamnt  +downstreamnt
atgcctgaattaccagaggtagaaaccagccgacgcggtatcgagccccacatggtgggc
gaaaccattctgcacgccgtggtgcgcaattcccggctgcgctggccagtttccagtgaa
atccacgcgttaagcgatcaaccggtattgagcgtacagcgtcgcgcgaaatatctgctg
ctggagctgccaggtggctggattatcattcatctcggcatgtccggcagcctgcggatg
ctccctggcgagctgccaccggccaagcatgaccatgttgatttggtgatgagtaacggc
aaagtgttgcgttacaccgatccacgccgatttggtgcctggctgtggaccaacgatttg
gcaggcagtagcgtgctggcgcatctgggtccggaaccgctgagcgacgattttgatggt
aattatctgtttgaaaaatcacgcggcaaacgcacggtgatcaaacaatggctgatggat
aacaaggtcgtggttggcgtgggtaacatttacgccagcgaatcgctgtttaccgccggg
atcatccccgatcgtccagccatgagcctgagccaggctgaagcgacgctgttggccaat
accatcaaggccgtactgctgaggtcgattgagcaggggggcaccacgttgcgtgatttt
ctacaaaccgacggcaagccaggctactttgcgcaggaattacaggtatacggtcgggcc
ggtgagccgtgtcgtgcctgtggcacgccgattgtcagtggcaagcatgggcaacgcagc
accttctggtgcccacgctgccagcattaa

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