KEGG   Pseudoalteromonas arctica: PARC_a0131
Entry
PARC_a0131        CDS       T05179                                 
Symbol
birA
Name
(GenBank) BirA family transcriptional regulator, biotin operon repressor / biotin-[acetyl-CoA-carboxylase] ligase
  KO
K03524  BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
Organism
part  Pseudoalteromonas arctica
Pathway
part00780  Biotin metabolism
part01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:part00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00780 Biotin metabolism
    PARC_a0131 (birA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:part03000]
    PARC_a0131 (birA)
Enzymes [BR:part01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.4  Other carbon-nitrogen ligases
    6.3.4.15  biotin---[biotin carboxyl-carrier protein] ligase
     PARC_a0131 (birA)
Transcription factors [BR:part03000]
 Prokaryotic type
  Helix-turn-helix
   Other families
    PARC_a0131 (birA)
SSDB
Motif
Pfam: BPL_LplA_LipB HTH_11 BPL_LplA_LipB_2 HTH_24 BPL_C MarR_2 HTH_20 HTH_5 Fe_dep_repress MarR HTH_IclR HTH_AsnC-type HTH_DeoR HTH_28 HTH_1 HTH_Crp_2 Mga HTH_10 TrkA_TMD HTH_34 HTH_27 HTH_36 RepL Rrf2
Other DBs
NCBI-ProteinID: ATC84905
UniProt: A0A290RYU1
Position
I:127953..128945
AA seq 330 aa
MKAPDGNKLAILNALNQGGFVSGQALGEKLGISRAAVSKHIKTLQEMGLDIFKVTGKGYC
LNSQVGLLNKTQIDQHYKALGANTADVEVHPIIDSTNSELMRRIQAKTALESGTVIVAEM
QQAGRGRRGRVWQSPFGANLYYSYFWRLDDGLQAAMGVSIAVGLAVYDAIKALYQIDVEL
KWPNDIYINKQKLAGVLVELDGQPQGPCQLVIGIGINLQMPESFSQHIDQAWTDLNQHTQ
KLDKNQLVASLTYHLEQRLVQYRQTGLQDMYEQWNSLNAFAGDYVELNTGHRSWRGICEG
IDPQGGIRIRQDGEVKSYYGGEVSLRKAQV
NT seq 993 nt   +upstreamnt  +downstreamnt
atgaaagcacctgatggaaacaaactcgctattttaaatgcacttaaccaagggggcttt
gtatctggccaagccttgggtgaaaagctaggaattagccgagctgcggtgagtaaacat
atcaaaacgttacaagaaatgggcttggatatttttaaagtgactggcaaaggctactgt
ttgaatagtcaggtgggccttttaaataaaacacaaattgatcagcactacaaagcgcta
ggtgctaatactgccgatgtagaagtacaccctattattgattcgaccaacagcgagctt
atgcgccgtatacaggctaaaacagcgcttgagtctggcactgttattgttgctgaaatg
cagcaagcagggcgtggccgacgcggccgtgtttggcaatccccatttggcgctaatttg
tattacagttacttttggcgtttagatgacgggcttcaagctgcaatgggtgtatcaatt
gcggtaggccttgctgtttatgatgcaattaaagcgttataccaaattgacgtagagctt
aaatggcctaacgatatttatataaataaacaaaaacttgcaggtgtattggttgaatta
gatgggcaaccgcaaggaccttgtcagttagtgattggtataggtattaatttacaaatg
cctgagagttttagccaacatatagaccaagcgtggaccgacttaaatcaacatactcaa
aagcttgataaaaaccagctggtggcgtcacttacttatcatttagagcagcgtttagtg
cagtatcgtcaaactggcttacaagatatgtatgagcaatggaattcgcttaatgcgttt
gctggcgattatgttgagctaaatacaggacaccgaagctggcgtggaatatgcgaaggt
attgacccacaaggtggaatacgaattcgccaagatggtgaagtaaaaagttattacggt
ggggaagtctccctcagaaaggcgcaagtatga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical substance (7)   
   KEGG COMPOUND (7)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (24)   
   Pfam (24)   
All databases (44)   

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