KEGG   Pseudoalteromonas arctica: PARC_a1197
Entry
PARC_a1197        CDS       T05179                                 
Symbol
truA
Name
(GenBank) tRNA pseudouridine38-40 synthase
  KO
K06173  tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
Organism
part  Pseudoalteromonas arctica
Brite
KEGG Orthology (KO) [BR:part00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:part03016]
    PARC_a1197 (truA)
Enzymes [BR:part01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.12  tRNA pseudouridine38-40 synthase
     PARC_a1197 (truA)
Transfer RNA biogenesis [BR:part03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    PARC_a1197 (truA)
 Prokaryotic type
    PARC_a1197 (truA)
SSDB
Motif
Pfam: PseudoU_synth_1 DUF2344
Other DBs
NCBI-ProteinID: ATC85838
UniProt: A0A290S121
Position
I:1155640..1156437
AA seq 265 aa
MRVALGVEYNGARYSGWQRQSHVNSVQQEVEKALSRICNHPVEVICAGRTDAGVHGTGQV
IHFETQADRDMVAFTLGMNTLMPKDIAIRFAQPVADDFHARFSATARRYRYVIYNSPLRG
AVLNEGVTHFHHHLDETKMQEACQYLIGKHDFTSFRAIHCQANTPTRTIHHLSVQRQGTY
VIIDIKANAFLHHMVRNITGSLMDVGLHKQQPIWIKELLDCKERAKASATAKAAGLYLVD
VDYPEQFNIPQTPLGPLFLPDIDVV
NT seq 798 nt   +upstreamnt  +downstreamnt
atgcgagtagcacttggagttgaatacaacggcgcacgttatagtggttggcagcgtcaa
tcacatgtaaatagcgtacagcaagaagtagaaaaagcgttgtcgcgtatttgtaatcat
cctgttgaagttatatgtgcagggcgtacagatgctggtgtgcacggtacaggccaagta
atacactttgaaacgcaagccgatcgcgatatggtcgcatttacactaggtatgaatact
ttaatgcctaaagatattgctattcgctttgcccaaccggttgctgatgactttcatgcc
cgttttagtgctacagctcgtcgttatcgctatgttatttataactcccccctacgaggt
gcggtattaaacgagggggttacgcattttcatcatcatcttgatgaaacaaagatgcaa
gaggcgtgtcagtacttaataggtaaacacgatttcacctcttttagagcgatacattgc
caagcgaatacaccgacaagaacaattcatcatctgtcggtacagcgccaaggtacttac
gttattattgatattaaagcgaatgcatttttacatcacatggtacgtaatatcacaggc
agcttaatggatgttggtttacataaacaacaacctatatggataaaagagctacttgat
tgtaaagaacgcgcaaaggccagtgctaccgctaaggctgctggtttgtatttagtggat
gttgactaccctgagcaatttaatattcctcaaacacctttaggccctttatttttgcct
gatatagatgtggtataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (11)   

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