KEGG   Pseudoalteromonas arctica: PARC_a2739
Entry
PARC_a2739        CDS       T05179                                 
Symbol
truB
Name
(GenBank) tRNA pseudouridine55 synthase
  KO
K03177  tRNA pseudouridine55 synthase [EC:5.4.99.25]
Organism
part  Pseudoalteromonas arctica
Brite
KEGG Orthology (KO) [BR:part00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:part03016]
    PARC_a2739 (truB)
Enzymes [BR:part01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.25  tRNA pseudouridine55 synthase
     PARC_a2739 (truB)
Transfer RNA biogenesis [BR:part03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    PARC_a2739 (truB)
 Prokaryotic type
    PARC_a2739 (truB)
SSDB
Motif
Pfam: TruB_N TruB_C_2 TruB-C_2
Other DBs
NCBI-ProteinID: ATC87192
UniProt: A0A290S553
Position
I:complement(2671653..2672612)
AA seq 319 aa
MAKRSKGRAVDGILLLNKPEGISSNKALQQAKSVYFAQKAGHTGALDPLATGMLPICFGE
ATKFTQFLLDTDKTYIVRAQLGERTTTSDSDGEIVSTKDVNVTREQLTKEIAAFVGESEQ
YPSMYSALKYQGRPLYKYAREGIEVPRKCRKINVFSLSFDEFDEQSNVLQMTAHVSKGTY
IRTIVDDLGENLGCGAHVIMLHRTAVGQYPADKMVSLDEIEALLAKAKEEELAPSTYLDS
LLLPIDTALTDLPVVEITKEQGGIFSHGQAVELSIALPDGAIKVVADNIFIGTGERNSNG
HLKVKRGLASQQDDYVKPE
NT seq 960 nt   +upstreamnt  +downstreamnt
atggcaaagcgcagtaaaggccgtgcagttgacggtattttgttgttaaacaaacctgaa
ggcatttcatcaaataaagcattacagcaagccaaaagtgtttattttgcgcaaaaagct
gggcacacaggtgctttagatccacttgccacaggtatgctgccaatttgttttggtgaa
gcgactaagtttacgcagtttttactcgatacagataaaacctatatcgttcgtgcacaa
ctgggtgagcgtacaacaacatcagattctgatggcgaaattgttagcactaaagatgtg
aacgttacgcgtgaacagctaacaaaagaaatagctgcttttgttggtgagtctgaacaa
tatccgtcaatgtactcagctcttaagtaccaaggtagaccgttatataagtacgcgcgc
gaaggtattgaagttcctcgtaaatgcagaaaaataaacgtgtttagcttatcgtttgac
gaatttgatgaacaaagcaacgtattacaaatgacggcccatgtatctaaagggacctac
attcgtacaatcgttgatgatttaggcgaaaacctaggctgtggcgcacacgttattatg
ctccacagaaccgctgttggtcagtatccggcagataaaatggtctcgcttgatgagatt
gaagcgttgcttgctaaagcgaaagaagaagagcttgcgccttcaacttatttagactcg
ctattgctaccaattgatactgctttaactgatttacccgttgttgaaattacaaaagaa
caagggggaatttttagtcacgggcaagctgtagaattatcaatcgctttacctgatggt
gcaattaaagttgttgcggataatatatttattggtactggtgagcgtaactcaaacggt
catttaaaggttaaacgtggtcttgctagtcagcaagacgattacgtgaagcctgaataa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (12)   

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