KEGG   Paracoccus jeotgali: CYR75_09885
Entry
CYR75_09885       CDS       T05276                                 
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
  KO
K01710  dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
Organism
paru  Paracoccus jeotgali
Pathway
paru00521  Streptomycin biosynthesis
paru00523  Polyketide sugar unit biosynthesis
paru00525  Acarbose and validamycin biosynthesis
paru00541  O-Antigen nucleotide sugar biosynthesis
paru01100  Metabolic pathways
paru01110  Biosynthesis of secondary metabolites
paru01250  Biosynthesis of nucleotide sugars
Module
paru_M00793  dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:paru00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00541 O-Antigen nucleotide sugar biosynthesis
    CYR75_09885 (rfbB)
  09109 Metabolism of terpenoids and polyketides
   00523 Polyketide sugar unit biosynthesis
    CYR75_09885 (rfbB)
   01055 Biosynthesis of vancomycin group antibiotics
    CYR75_09885 (rfbB)
  09110 Biosynthesis of other secondary metabolites
   00521 Streptomycin biosynthesis
    CYR75_09885 (rfbB)
   00525 Acarbose and validamycin biosynthesis
    CYR75_09885 (rfbB)
Enzymes [BR:paru01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.46  dTDP-glucose 4,6-dehydratase
     CYR75_09885 (rfbB)
SSDB
Motif
Pfam: GDP_Man_Dehyd Epimerase RmlD_sub_bind Polysacc_synt_2 3Beta_HSD NAD_binding_4 adh_short NmrA NAD_binding_10 XdhC_C adh_short_C2 Sacchrp_dh_NADP F420_oxidored
Other DBs
NCBI-ProteinID: AUM74548
UniProt: A0A2K9MFY6
Position
2026252..2027292
AA seq 346 aa
MKILITGGAGFIGSAVVRQAVAAGHQVVNLDALTYAANLENVASVADAPGYVFEHADIRD
RAALDRILRAHDPDAIMHLAAESHVDRSIDGPGAFVETNITGTYNLLEAARAHWLARGKP
AGFRFHHISTDEVFGSLGPQGQFTETTPYDPRSPYSASKAASDHLVRAWHETYALPVILS
NCSNNYGPFHFPEKLVPVVILKALAGQPIPIYGDGGNVRDWLYVEDHADALLTVLTRGEI
GRSYNIGGENEATNLELVQTICAQMDELHPQGAPHADLISFVADRPGHDRRYAIDPTRIR
TELGWRPSVTLEQGLRRTVDWYLTNRDWWQPLLDRDGVGTRLGAAE
NT seq 1041 nt   +upstreamnt  +downstreamnt
atgaagatcctgatcaccggcggcgccgggttcatcggctcggcggtggtcaggcaggcg
gtggcggcggggcatcaggtggtcaacctcgacgcgctgacctatgccgcaaaccttgag
aacgtcgccagcgtggccgatgcgccgggctatgtctttgaacatgccgacatccgcgac
cgcgccgcgctggaccgcatcctgcgcgcgcatgaccccgacgcgatcatgcatctggcg
gcggaaagccatgtcgaccgctcgatcgacgggccgggggcctttgtcgagaccaatatc
accggcacctacaacctgctcgaggcggcgcgcgcccattggctggcgcgcggcaagcct
gcgggctttcgctttcaccacatctcgaccgatgaggtcttcggctcgctcgggccgcag
gggcagttcaccgagaccacgccctatgacccgcgcagcccctattcggcctcgaaagcg
gcgtccgaccatctggtgcgcgcttggcacgagacctatgccctgcccgtcatcctcagc
aattgctcgaacaattacgggccgttccacttccccgagaagctggtgccggtggtcatc
ctgaaagcgctggctggccagccgatcccgatctatggcgatggcggcaatgtccgcgac
tggctctatgtcgaggatcacgccgacgcgctgctgaccgtgctgacccgcggcgagatc
gggcgcagctacaatatcggcggcgagaacgaggccacgaacctcgagctggtccagacc
atctgcgcccagatggacgagctgcatccgcaaggcgcgccccatgccgatctgatcagc
tttgtcgccgaccgccccggccatgaccgccgctatgccatcgacccgacccgcatccgg
accgagttgggctggcggccctcggtcacgctcgaacaggggctgcggcgcacggtcgac
tggtatctgacgaaccgcgactggtggcagccgctgctggatcgcgacggcgtcggcacc
cgtctgggcgcagcggaatga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (8)   
   KEGG PATHWAY (7)   
   KEGG MODULE (1)   
Chemical substance (3)   
   KEGG COMPOUND (3)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (13)   
   Pfam (13)   
All databases (33)   

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