KEGG   Pseudoalteromonas atlantica: Patl_0201Help
Entry
Patl_0201         CDS       T00372                                 

Gene name
fadB
Definition
multifunctional fatty acid oxidation complex subunit alpha
Orthology
K01825  
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
Organism
pat  Pseudoalteromonas atlantica
Pathway
Fatty acid degradation
Valine, leucine and isoleucine degradation
Geraniol degradation
Lysine degradation
Tryptophan metabolism
beta-Alanine metabolism
Propanoate metabolism
Butanoate metabolism
Limonene and pinene degradation
Caprolactam degradation
Biosynthesis of unsaturated fatty acids
Metabolic pathways
Biosynthesis of secondary metabolites
Microbial metabolism in diverse environments
Carbon metabolism
Fatty acid metabolism
Module
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:pat00001]
 Metabolism
  Overview
   01200 Carbon metabolism
    Patl_0201 (fadB)
   01212 Fatty acid metabolism
    Patl_0201 (fadB)
  Carbohydrate metabolism
   00640 Propanoate metabolism
    Patl_0201 (fadB)
   00650 Butanoate metabolism
    Patl_0201 (fadB)
  Lipid metabolism
   00071 Fatty acid degradation
    Patl_0201 (fadB)
   01040 Biosynthesis of unsaturated fatty acids
    Patl_0201 (fadB)
  Amino acid metabolism
   00280 Valine, leucine and isoleucine degradation
    Patl_0201 (fadB)
   00310 Lysine degradation
    Patl_0201 (fadB)
   00380 Tryptophan metabolism
    Patl_0201 (fadB)
  Metabolism of other amino acids
   00410 beta-Alanine metabolism
    Patl_0201 (fadB)
  Metabolism of terpenoids and polyketides
   00903 Limonene and pinene degradation
    Patl_0201 (fadB)
   00281 Geraniol degradation
    Patl_0201 (fadB)
  Xenobiotics biodegradation and metabolism
   00930 Caprolactam degradation
    Patl_0201 (fadB)
Enzymes [BR:pat01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.35  3-hydroxyacyl-CoA dehydrogenase
     Patl_0201 (fadB)
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.17  enoyl-CoA hydratase
     Patl_0201 (fadB)
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.2  Acting on hydroxy acids and derivatives
    5.1.2.3  3-hydroxybutyryl-CoA epimerase
     Patl_0201 (fadB)
  5.3  Intramolecular oxidoreductases
   5.3.3  Transposing C=C bonds
    5.3.3.8  dodecenoyl-CoA isomerase
     Patl_0201 (fadB)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
JGI: 
UniProt: 
Position
240399..242558
Genome map
AA seq 719 aa AA seqDB search
MIYEGKSLNVTLLPNGIAELVFDAQGSVNKFDRQTVSELDEATQALKSQSDVKGVLVRSN
KSTFIVGADITEFTGLFDMPAEEVLTWVAKTSQVFDRFEDLPFPTISAINGFALGGGCEM
TLACDLRVADTTAAIGLPEVKLGLMPGFGGTVRLPRLIGADNALEWMTTGRDRKAAKALA
EGAVDAVVAPEKLRDAALSMLQDAIDGKFGWEARRAQKKAPLKLNKNESMMSFSTAKAMV
FAQAGKHYPAPHAMVDTVANAARLDRAGALELENQGFTKLAKSDAAKAQVGIFLADQLVK
SKGKKQAKASTKDVKQTAVLGAGIMGGGIAYQSAVKGTPVIMKDINQDALDLGLNEAAKI
LGKGMQRGKVTPAVMSNTLNNIVPTLEYSAIKDVDLVIEAVVENPKVKGIVLKETEQNVS
DDTVICSNTSTISINQLAESLEKPERFCGMHFFNPVHKMPLVEIIRGEKTTDATIATVVA
ATLKMGKTPIVVNDCPGFLVNRVLFPYFAGFSKLVMDGADFVAVDKVMEKIFGWPMGPAY
LLDVVGMDTADHASSVMADGIPERMQKIDNDPVTLLYKSERLGQKNGKGFYNFSLDKRGR
PAKKAADEAYELFAPHCADKRDFDADEIIARVMIPMANEAIRCLEEGIVGSAAEADMALL
YGLGFPPFRGGVFRYIETMGLANFVALADKYADLGPIYQISDGVREMAASGKSYFSQSA
NT seq 2160 nt NT seq  +upstreamnt  +downstreamnt
atgatatatgaaggcaaaagcctcaacgtaacgctgttgccaaacggcattgcagagctt
gtattcgatgctcaaggttcggtgaataaattcgatcgccaaacggttagcgagcttgac
gaagcgactcaagcccttaaaagtcagtcagatgtaaaaggggtcttggtgcgctcgaat
aagtcgacctttatcgtgggtgctgacattactgaatttactggcttattcgatatgcct
gctgaagaagtattaacttgggtagcgaaaacgtctcaggtgttcgatagattcgaagac
ttacctttcccgacgatttcggctattaatggctttgcgctaggtgggggttgtgaaatg
acgttagcctgtgacctgcgtgttgcagacaccacagcagccattggcttgcctgaagtg
aaattgggccttatgcctggttttggtggcacagtacgtttacctcgcttaatcggcgct
gataatgcgctagagtggatgaccacaggccgtgaccgcaaagcggccaaagcgctagct
gaaggcgcagttgatgccgtagttgcgcctgaaaaattgcgtgacgctgcccttagcatg
ttgcaagacgctatcgacgggaaattcggttgggaagcacgtcgcgcccaaaagaaagcg
cctcttaaactgaacaaaaatgaatccatgatgagcttctcaacagccaaagccatggta
ttcgcccaagcgggtaagcattacccagcacctcatgccatggttgataccgttgctaac
gcagcccgtttagaccgcgctggtgcattagagctggaaaaccaaggattcaccaaacta
gcgaaaagcgatgcagcgaaggcccaagtgggtatcttccttgcggatcagttagtgaaa
agcaaaggtaaaaaacaagccaaagcctcaaccaaagacgttaagcaaacggccgtatta
ggtgcaggtatcatgggcggcggtattgcataccagtcagctgtgaaaggcacgccggtt
atcatgaaagacattaaccaggacgcattggatcttggtttgaatgaagcggcgaaaatt
ttaggtaaaggtatgcagcgcggtaaagtgacccctgctgttatgtccaacactttgaat
aacatcgtaccgacccttgaatactcagcgataaaagacgttgatttggttattgaagcg
gttgttgagaacccgaaagtcaaaggtatagtgcttaaagagacagagcaaaatgtgtct
gatgacacagtgatttgttctaacacttcaacgatttcaattaaccaattagcagagagc
ctagaaaagcctgagcgcttctgcggcatgcacttctttaacccagtgcacaaaatgcca
ttagttgagatcattcgcggtgaaaaaaccactgatgcgaccattgccactgtggttgca
gccaccctgaaaatgggtaaaaccccgattgtggttaacgattgccctggtttcttggta
aaccgagtgttgttcccttacttcgcgggctttagcaaattggttatggacggcgctgac
tttgtagcagtagacaaagtcatggagaaaatcttcggttggcctatgggcccagcttat
ttacttgacgtagtaggcatggacaccgccgatcacgcatcaagcgtcatggccgatggc
attccagagcgtatgcagaaaattgacaacgatccggttaccttgttgtacaaatctgag
cgtttagggcagaaaaacggcaaaggtttctacaacttcagcctagacaagcgcggtcgc
ccagcgaagaaagccgctgatgaagcgtacgaattgtttgcaccacattgcgccgacaag
cgtgacttcgacgcggatgaaatcattgcacgagtcatgatcccaatggcaaacgaagcg
attcgttgtttagaggaaggcatagtaggcagtgcagcagaagctgacatggccttgttg
tacggcttgggcttccctccctttagaggcggggtgttccgttacatcgaaaccatgggc
ttggctaactttgtagctctagccgacaaatacgcggatttaggtccgatttatcagatt
tctgacggcgtgcgcgaaatggccgcttcaggtaaatcttatttttctcaatcagcctaa

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