KEGG P.atlantica: Patl

Pseudoalteromonas atlantica: Patl_0202

Entry

Patl_0202 CDS P.atlantica

Gene name fadA

Definition 3-ketoacyl-CoA thiolase (EC:2.3.1.16)

Orthology K00632 acetyl-CoA acyltransferase [EC:2.3.1.16]

Pathway pat00071 Fatty acid metabolism
pat00280 Valine, leucine and isoleucine degradation
pat00281 Geraniol degradation
pat00362 Benzoate degradation via hydroxylation
pat00592 alpha-Linolenic acid metabolism
pat01100 Metabolic pathways

Class Metabolism; Lipid Metabolism; Fatty acid metabolism [PATH:pat00071]
Metabolism; Lipid Metabolism; alpha-Linolenic acid metabolism
[PATH:pat00592]
Metabolism; Amino Acid Metabolism; Valine, leucine and isoleucine
degradation [PATH:pat00280]
Metabolism; Xenobiotics Biodegradation and Metabolism; Ethylbenzene
degradation
Metabolism; Xenobiotics Biodegradation and Metabolism; Benzoate
degradation via hydroxylation [PATH:pat00362]
Metabolism; Xenobiotics Biodegradation and Metabolism; Geraniol
degradation [PATH:pat00281]

SSDB

Motif Pfam: Thiolase_N Thiolase_C
PROSITE: AA_TRNA_LIGASE_I THIOLASE_1 THIOLASE_2 THIOLASE_3

Other DBs NCBI-GI: 109896533
NCBI-GeneID: 4171748
JGI: Patl0202
UniProt: Q15ZF4

Position 242580..243740

AA seq 386 aa
MKEVVVVDCIRTPMGRSKGGIFRNVRAETLSAHLMSKLIERNPNLDPNEIEDIIWGCVQQ
TKEQGFNIARNAQLLTDIPRSVAAVTVNRLCGSSMQALHDATSGIMSGRGDVYMIGGVEH
MGHVPMDFNIDFHPGIAKTAARASGSMGMTAELLGRQNGISREMQDAFGARSHQKAHAAA
VEGRWNEIVATEGHDADGILKLIDADETIRPDSTTESMSGLRPVFDPVNGTVTAGTSSAL
SDGASAMLIMSADKAKALGLTPRAKIRAMAVAGCDAAIMGFGPVPATQKALKRAGMTMAD
IELAEFNEAFAAQALSCIKQLGWLDTYEDKVNLNGGAIALGHPLGCSGSRISTTLINLME
ANDKSIGLATMCIGLGQGIATVFERV

NT seq 1161 nt +upstreamnt +downstreamnt
atgaaagaagtcgtagtagtcgattgtattcgtaccccaatggggcgctcgaaaggcggt
attttccgcaatgtacgtgctgaaacgttatcagcgcacttaatgagtaagctgatagaa
cgtaaccctaatcttgatccaaacgagattgaagacatcatttggggttgtgtacaacaa
accaaagagcaggggttcaacatcgctcgtaatgcgcagttattaactgacattccacgc
agtgtggctgccgtaacggttaaccgtttatgtggctcatctatgcaagctttgcatgat
gcaacaagcggcatcatgagtggccgcggtgatgtgtacatgattggtggtgtagagcac
atgggccacgtacccatggacttcaacatcgactttcacccaggcattgctaaaaccgca
gctcgagcctcaggcagcatgggcatgaccgctgaattgctgggacgtcaaaacggtatc
tcccgtgaaatgcaagatgcattcggcgcacgttcgcaccaaaaagctcatgcggcagct
gttgaaggtcgctggaatgaaatcgtcgccactgaaggccatgacgctgacggtatacta
aaactgattgatgcagatgaaactattcgtcctgactcaaccactgaaagtatgtctggc
ttgcgcccagtattcgacccagtcaacggcactgtaacggccggtacatcttcagcgtta
tcagatggcgcatcagccatgttgattatgtctgctgataaagccaaagcactcggttta
accccacgtgcaaaaattcgtgctatggcggttgccggttgtgatgccgctatcatgggc
tttggcccagttcctgcgacgcaaaaagcccttaaacgtgccggcatgacaatggctgac
atcgaattagctgagtttaacgaagcattcgcagcacaagccttgtcatgtattaagcag
ctgggttggttggatacttacgaagacaaagtaaacctcaatggtggcgcgattgcgcta
gggcatccgctaggctgctctggttcacgtatctctacgaccttgatcaacctaatggaa
gcgaacgataaatccatcggcttagcgaccatgtgtattggtttaggccagggtattgcc
actgtgttcgagcgcgtataa

All links

Pathway (6)   
   KEGG PATHWAY (6)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (2)   
   JGI-PAT (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (6)   
   Pfam (2)   
   PROSITE (4)   
All databases (23)

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