KEGG T00372: Patl

Pseudoalteromonas atlantica: Patl_1799

Entry

Patl_1799 CDS T00372

Gene name

sucA

Definition

2-oxoglutarate dehydrogenase E1 component

Orthology

K00164

2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]

Organism

pat Pseudoalteromonas atlantica

Pathway

pat00020	Citrate cycle (TCA cycle)
pat00310	Lysine degradation
pat00380	Tryptophan metabolism
pat01100	Metabolic pathways
pat01110	Biosynthesis of secondary metabolites
pat01120	Microbial metabolism in diverse environments

Module

pat_M00009	Citrate cycle (TCA cycle, Krebs cycle)
pat_M00011	Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate

Class

Metabolism; Carbohydrate metabolism; Citrate cycle (TCA cycle) [PATH:pat00020]
Metabolism; Amino acid metabolism; Lysine degradation [PATH:pat00310]
Metabolism; Amino acid metabolism; Tryptophan metabolism [PATH:pat00380]

SSDB

Motif

Pfam:

Transket_pyr E1_dh DUF2156 cwf21

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

2158344..2161166

AA seq 940 aa
MQQSVMKAWWDSSHMAGGNAAYVEELYEAYLEDAKSVSDEWRAIFDKLPKVEGAELETKH
SEIRDQFRALAALGPVARAGTVSTGTSHASDEKQVKVLQLINAYRFRGHQHANLDPLELW
KQPRVRDLELSHHSLSEKDFDTVYNVGSYAIGQDSMKLGDLFKSLNRTYCGSIGTEYMHI
TDTEQKRWLQDRIESVQAKPEISRDEKVAILKGLISADGMEKYLGAKFPGAKRFSLEGGD
ALVPMLKGLISHAGECGTKEVVVGMAHRGRINVLVNVLGKNPSVLFDEFSGKHDNTLGAG
DVKYHAGYSSDYATPGGNVHLALAFNPSHLEIVNPVVIGSVRARLDRRNCEDGSVVLPIT
IHGDSAIAGQGVVQETFNMSQTRGFKVGGTVRIVINNQVGFTTSNTEDTRSTQYCTDIAK
MVQAPIFHVNSDDPEAVMFVTKLALDYRNKFKRDVVIDLVCYRRHGHNEADEPSATQPLM
YKKIKKHAVPRQLYAEQLLAEGSIESHEIDKLVSDYRAALDHGACVVEEWRPMTEHSVDW
TPYLGHDWTAPYEGQISVEKLKDLGDKLCTYPEDHKLQSRVAKLYQDRRAMVAGEKLLDW
GMAENLAYASIVDRGSNIRMTGQDSGRGTFFHRHAVLHGQGDGEAYMPLAHLHPEQGTME
IYDSVLSEAAVLAFEFGYATAEPGTLTIWEAQFGDFANGAQVVIDQFLSSGEAKWGRLCG
LTMLLPHGYEGQGPEHSSARLERFLQMCADHNWQVCVPSTPAQVFNMLRRQAIRPMRKPL
IVMSPKSLLRHPLAVSSLEELSTGVFQNVIDEIDEMDASKVKRVVMCSGKVYYDLLDQRR
KSEQDDVAIIRIEQLYPFPHAEIEPIVNKFKHVTDWVWCQEEPQNQGAWYCSQHHFWSAI
PNGAKLSYAGRNASASPAVGYISVHNQQQKELVDDALTIK

NT seq 2823 nt +upstreamnt +downstreamnt
atgcaacaaagcgtgatgaaagcatggtgggattcttctcacatggctggtggcaacgct
gcttatgtagaagaactatacgaagcatatcttgaagacgcgaaaagcgtatctgacgaa
tggcgtgctattttcgacaaattacctaaggtcgaaggagctgaacttgagactaagcac
agtgaaattcgtgaccaatttcgagcattagctgcactgggtcctgttgctcgagcaggg
actgtttctactggtacatctcatgccagcgatgagaaacaagttaaagttttacagctt
attaatgcataccgttttcgcggtcaccagcacgcaaatcttgatccattagaactttgg
aaacaacccagagttcgcgatcttgaattgtcgcatcactcgttatcagaaaaagatttc
gacactgtatataatgtcggctcttacgccataggccaagacagtatgaaattaggtgat
ttgttcaaatcacttaaccgtacttattgtggctcaattggtactgagtacatgcacatt
accgatacagaacaaaagcgctggttacaagatagaattgaatctgtacaagctaaacct
gaaatttctcgagatgagaaggtcgccattcttaaaggcctaatttctgctgatggcatg
gagaaatacctaggggctaaattcccaggagctaaacgtttctctcttgaaggcggtgac
gcattagtgcctatgctcaaaggcttgattagtcatgctggcgaatgtggcacgaaagaa
gtggttgtcggtatggctcaccgaggacgtattaacgttcttgttaacgtactaggcaaa
aacccgtcggttttatttgatgaattctctggtaagcacgacaacactttaggtgctggc
gatgttaaataccatgctggctactcgtcagattacgctaccccaggcggcaacgtgcat
ttagcacttgctttcaacccgtctcatttagaaattgttaatccagtggttatcggctcg
gtgcgcgcgcgtctagatcgcagaaactgtgaagatggctctgtggtattaccgattact
attcatggtgattccgctattgctggtcagggtgtagtgcaagagacatttaacatgtct
caaacacgtggtttcaaagtgggcggtacggttcgcatcgttatcaacaaccaagttggt
ttcaccacatccaatacggaagatacgcgttcaactcaatactgtactgatattgctaaa
atggtacaggcgcctatcttccacgtaaattcagatgatcctgaagccgttatgtttgtg
actaagctagcccttgattatcgtaataaatttaaacgcgacgtggtaattgatttagtc
tgttaccgccgtcacggacacaacgaagccgatgagccgagtgcgacacagccgttgatg
tacaagaagattaaaaagcacgctgttcctcgtcagctttatgccgagcaattgctagcc
gaaggctctattgaatctcatgaaatagacaagttagtatctgattatcgcgcagcactt
gatcacggagcttgtgtggtagaagagtggcgcccaatgactgagcattcagtggattgg
actccgtatcttggccacgactggactgcaccttatgaggggcaaatcagtgtagagaag
cttaaagatctcggcgataagttatgtacttatccagaagatcacaagttacaatctcgc
gtagccaagctatatcaagaccgtcgcgctatggttgctggtgaaaaattacttgactgg
ggaatggccgaaaatctagcttacgcctctatcgttgaccgtggctcaaacatccgtatg
acaggtcaagattctggtcgtggtaccttcttccaccgtcatgctgtattgcatggtcaa
ggtgatggcgaagcgtatatgccacttgcgcatttacacccagaacaggggaccatggaa
atatacgattctgtattatcagaagcggctgtgctggcctttgaattcgggtatgccacg
gcagaaccaggtacactgaccatttgggaagctcaatttggtgatttcgccaacggtgct
caggtggttattgaccaattcctaagttcaggtgaagccaaatggggccgactatgcggt
cttactatgctgcttcctcatggttacgaaggtcaaggcccagagcatagctcggcacgt
ttagagcgtttcttacaaatgtgtgctgaccataactggcaggtgtgcgtaccatcaacg
ccagctcaggttttcaacatgttgcgtcgtcaggctattcgcccgatgcgtaagccacta
attgttatgtcacctaaatcattgttacgccatccattggccgtttcttctcttgaggag
ttgtcgactggcgtattccaaaacgtgattgatgaaattgacgaaatggatgcctcgaag
gtgaagcgcgtcgtgatgtgttcaggcaaagtgtattatgacttacttgatcagcgccgt
aagagtgagcaggatgatgttgctattattcgtattgagcaactctatccgttcccgcac
gctgaaattgagcctatcgtcaataagttcaaacacgttactgattgggtttggtgtcaa
gaagagccacaaaaccaaggtgcttggtattgtagtcaacaccacttttggtcagctatt
cctaacggcgcaaaattaagctatgccggtcgtaacgcatctgcgtcgccagcggtaggg
tatatttctgttcacaaccagcaacaaaaagagttggttgatgatgcattaactattaaa
taa

All links

Pathway (8)   
   KEGG PATHWAY (6)   
   KEGG MODULE (2)   
Chemical substance (13)   
   KEGG COMPOUND (13)   
Chemical reaction (5)   
   KEGG ENZYME (1)   
   KEGG REACTION (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-PAT (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (38)   

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