KEGG T00372: Patl

Pseudoalteromonas atlantica: Patl_2377

Entry

Patl_2377 CDS T00372

Definition

isocitrate dehydrogenase

Orthology

K00031

isocitrate dehydrogenase [EC:1.1.1.42]

Organism

pat Pseudoalteromonas atlantica

Pathway

pat00020	Citrate cycle (TCA cycle)
pat00480	Glutathione metabolism
pat01100	Metabolic pathways
pat01110	Biosynthesis of secondary metabolites
pat01120	Microbial metabolism in diverse environments
pat01210	2-Oxocarboxylic acid metabolism
pat01230	Biosynthesis of amino acids

Module

pat_M00009	Citrate cycle (TCA cycle, Krebs cycle)
pat_M00010	Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate

Class

Metabolism; Carbohydrate metabolism; Citrate cycle (TCA cycle) [PATH:pat00020]
Metabolism; Metabolism of other amino acids; Glutathione metabolism [PATH:pat00480]

SSDB

Motif

Pfam:

IDH

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

complement(2890395..2892626)

AA seq 743 aa
MTTQKSKIIYTKTDEAPALATYSLLPIVESFASSADIEIELSDISLAARILANFADYLSD
EQKVPDALAELGELTQDAATNIIKLPNISASKPQLKAAIKELNDKGFNVPAYPEDPATDE
EKDIEARYSKVLGSAVNPVLREGNSDRRAPKAVKSYARKNPHSMGAWSQASQTHVAHMRG
GDFYSGEKSVTVKNAGHVRIEFTDNNGQVNVLKPRVDLLAGEVIDGMFMSKKALCDFFEE
QIEDAKQTGILFSLHVKATMMKVSHPIVFGHCVKVFYKKLFEKHAALFEELGVDANNGLG
SVYDKIATLPESQRAEIQKDINACYADRPPIAMVNSDKGISNLHVPSDVIVDASMPAMIR
SSGQMWGPDGKLHDTKAVIPESTYATIYQEMINFCKTHGAFDPTTMGSVSNVGLMAQKAE
EYGSHDKTFEMTGAGKVRVIDQDENVLIEHDVEEGDIWRMCQAKDAPIQDWVKLAVNRAR
QSGDPAIFWLDDERAHDAQLIEKVNTYLKDHDTEGLHIEIMAPVRAIRYSMERALRGLDT
ISVTGNVLRDYLTDLFPILELGTSAKMLSIVPLMAGGGLFETGAGGSAPKHVQQFVEEGH
LRWDSLGEFLAIAVSIEDLAIKNDNAKAKVLAKALDAATEKLLNEGKSPQRKAGQLDNRG
SHFYLAMYWAEALSTQAEDASLAAKFAPLFKALSSNEAKIVAEIDATQGSPENIGGYYYP
DDALLTQAMCPSATLNTILKDYK

NT seq 2232 nt +upstreamnt +downstreamnt
atgacaactcagaagtcaaagattatctatacgaaaactgatgaagctcccgcgctggca
acatactcattgctaccaatagttgagtcgttcgcttcatctgctgacattgaaatcgaa
cttagcgatatatcattagcagcacgtattttggccaattttgctgattatttgagtgac
gagcagaaagtacctgatgccctagcagagttgggcgagctcacacaagacgcagcaacg
aatatcattaagttacctaatatcagtgcttctaagccacaacttaaagctgctataaaa
gaattgaacgataaagggttcaatgtaccggcttaccccgaagacccagcgactgatgaa
gaaaaagacatcgaagcgcgttactctaaagtattaggcagtgccgtaaacccagtgctt
cgtgaaggtaactctgaccgccgtgcccctaaagcagtaaaaagctatgcacgcaaaaat
ccacattcaatgggagcgtggagccaagcgtcacaaactcatgttgcccacatgcgcggc
ggtgatttttactcaggtgaaaagtctgtaacggtgaaaaacgccggtcatgtgcgcatc
gaattcactgacaataacggtcaagtaaacgtattgaagccacgagttgatttgcttgct
ggcgaagtgattgatggcatgtttatgagcaagaaagccctttgtgatttcttcgaagaa
caaattgaagatgcaaagcaaaccggtattcttttctcattgcatgttaaagcgaccatg
atgaaggtgtctcacccgattgtatttggtcactgtgttaaagtgttctacaagaaatta
tttgaaaagcacgctgcgttatttgaagaattaggtgttgatgctaacaatggtttgggc
agtgtttatgacaagatagccactttacccgagtctcagcgcgctgaaattcaaaaagat
attaatgcctgctacgctgaccgtcctcctattgcgatggttaactcagataaaggtatt
tctaaccttcacgtaccaagtgacgtaatcgttgatgcttcaatgccagcaatgatccgt
tcttctgggcaaatgtggggtcctgatggaaaactgcatgatactaaagcggttatccca
gaaagcacttacgcgactatctatcaagagatgatcaacttctgtaaaacccacggtgca
tttgatcccaccactatgggatctgtctcaaacgttggtttgatggcgcaaaaagcggaa
gaatacggctctcacgacaaaacatttgaaatgacaggtgctggtaaagtacgtgttatt
gatcaagacgaaaatgtgttgattgagcatgacgtagaagagggcgatatttggcgtatg
tgtcaggcgaaagacgcgcctatccaagattgggttaaactagcagttaaccgcgcgcgc
caatctggcgacccggcaattttttggttagatgatgagcgtgctcatgatgctcagcta
atcgaaaaagtgaatacctacttgaaagatcacgatacagaaggcttgcacattgagata
atggcgcctgtgcgtgctattcgttattcaatggaacgcgcccttcgtggattagacacg
atttctgtaacaggtaacgttttacgcgactacctaacagatttgttccctattcttgaa
ttgggtaccagtgcaaaaatgttgtctatcgtacctttgatggccggtggtggtttgttt
gaaacaggcgctggcggtagtgctcctaagcacgttcagcagtttgttgaagaaggtcac
ctacgttgggattcactcggtgagtttttagcgattgctgtatcaattgaagatttggca
atcaaaaatgacaatgcgaaagcgaaagtattggctaaagcattagatgccgcgaccgag
aaattgctaaacgaaggtaaatcacctcagcgtaaagcaggacaacttgataaccgaggc
agtcatttctatcttgcgatgtattgggctgaagcgttgtcgacgcaagctgaagatgcg
tcattagcggctaaatttgcgccattgttcaaagcgcttagcagcaacgaagctaaaatt
gttgctgagattgatgcaactcaaggttcgccagaaaacattggtgggtattactaccca
gatgatgcattgctaacccaagcaatgtgcccaagtgcaacattgaacaccattctaaaa
gattataaataa

All links

Pathway (9)   
   KEGG PATHWAY (7)   
   KEGG MODULE (2)   
Chemical substance (7)   
   KEGG COMPOUND (7)   
Chemical reaction (4)   
   KEGG ENZYME (1)   
   KEGG REACTION (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-PAT (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (29)   

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