KEGG   PATHWAY: ade03430
Entry
ade03430                    Pathway                                
Name
Mismatch repair - Anaeromyxobacter dehalogenans 2CP-C
Description
DNA mismatch repair (MMR) is a highly conserved biological pathway that plays a key role in maintaining genomic stability. MMR corrects DNA mismatches generated during DNA replication, thereby preventing mutations from becoming permanent in dividing cells. MMR also suppresses homologous recombination and was recently shown to play a role in DNA damage signaling. Defects in MMR are associated with genome-wide instability, predisposition to certain types of cancer including HNPCC, resistance to certain chemotherapeutic agents, and abnormalities in meiosis and sterility in mammalian systems.
The Escherichia coli MMR pathway has been extensively studied and is well characterized. In E. coli, the mismatch-activated MutS-MutL-ATP complex licenses MutH to incise the nearest unmethylated GATC sequence. UvrD and an exonuclease generate a gap. This gap is filled by pol III and DNA ligase. The GATC sites are then methylated by Dam. Several human MMR proteins have been identified based on their homology to E. coli MMR proteins. These include human homologs of MutS and MutL. Although E. coli MutS and MutL proteins are homodimers, human MutS and MutL homologs are heterodimers. The role of hemimethylated dGATC sites as a signal for strand discrimination is not conserved from E. coli to human. Human MMR is presumed to be nick-directed in vivo, and is thought to discriminate daughter and template strands using a strand-specific nick.
Class
Genetic Information Processing; Replication and repair
Pathway map
ade03430  Mismatch repair
ade03430

Other DBs
GO: 0006298
Organism
Anaeromyxobacter dehalogenans 2CP-C [GN:ade]
Gene
Adeh_1698  DNA mismatch repair protein MutS [KO:K03555]
Adeh_2422  DNA mismatch repair protein MutS-like protein [KO:K07456]
Adeh_1715  DNA mismatch repair protein MutL [KO:K03572]
Adeh_1808  UvrD/REP helicase [KO:K03657] [EC:5.6.2.4]
Adeh_0097  ATP-dependent DNA helicase, Rep family [KO:K03657] [EC:5.6.2.4]
Adeh_3374  ATP-dependent DNA helicase, Rep family [KO:K03657] [EC:5.6.2.4]
Adeh_0827  Superfamily I DNA and RNA helicase-like protein [KO:K03657] [EC:5.6.2.4]
Adeh_3271  UvrD/REP helicase [KO:K03657] [EC:5.6.2.4]
Adeh_3223  UvrD/REP helicase [KO:K03657] [EC:5.6.2.4]
Adeh_1093  Exodeoxyribonuclease VII large subunit [KO:K03601] [EC:3.1.11.6]
Adeh_1094  Exodeoxyribonuclease VII small subunit [KO:K03602] [EC:3.1.11.6]
Adeh_2536  exonuclease RecJ [KO:K07462] [EC:3.1.-.-]
Adeh_3808  single-strand binding protein [KO:K03111]
Adeh_3445  DNA polymerase III, alpha subunit [KO:K02337] [EC:2.7.7.7]
Adeh_0002  DNA polymerase III, beta subunit [KO:K02338] [EC:2.7.7.7]
Adeh_3637  DNA polymerase III, tau subunit [KO:K02343] [EC:2.7.7.7]
Adeh_1313  DNA polymerase III, delta [KO:K02340] [EC:2.7.7.7]
Adeh_1312  DNA polymerase III, delta prime subunit [KO:K02341] [EC:2.7.7.7]
Adeh_3694  Exonuclease [KO:K02342] [EC:2.7.7.7]
Adeh_0768  Exonuclease [KO:K02342] [EC:2.7.7.7]
Adeh_0693  DNA ligase, NAD-dependent [KO:K01972] [EC:6.5.1.2]
Reference
  Authors
Jiricny J.
  Title
The multifaceted mismatch-repair system.
  Journal
Nat Rev Mol Cell Biol 7:335-46 (2006)
DOI:10.1038/nrm1907
Reference
  Authors
Li GM.
  Title
Mechanisms and functions of DNA mismatch repair.
  Journal
Cell Res 18:85-98 (2008)
DOI:10.1038/cr.2007.115
Reference
  Authors
Marti TM, Kunz C, Fleck O.
  Title
DNA mismatch repair and mutation avoidance pathways.
  Journal
J Cell Physiol 191:28-41 (2002)
DOI:10.1002/jcp.10077
Reference
  Authors
Ikejima M, Shimada T.
  Title
[Molecular mechanism of mismatch repair]
  Journal
Tanpakushitsu Kakusan Koso 46:1124-9 (2001)
KO pathway
ko03430   

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