KEGG PATHWAY: afo00970

PATHWAY: afo00970

Entry

afo00970 Pathway

Name

Aminoacyl-tRNA biosynthesis - Acidimicrobium ferrooxidans DSM 10331

Class

Genetic Information Processing; Translation

Pathway map

afo00970

Aminoacyl-tRNA biosynthesis

Module

afo_M00360

Aminoacyl-tRNA biosynthesis, prokaryotes [PATH:afo00970]

Organism

Acidimicrobium ferrooxidans DSM 10331 [GN:afo]

Gene

Afer_R0055	tRNA-Ala; K14218 tRNA Ala [KO:K14218]
Afer_R0049	tRNA-Ala; K14218 tRNA Ala [KO:K14218]
Afer_R0031	tRNA-Ala; K14218 tRNA Ala [KO:K14218]
Afer_R0017	tRNA-Arg; K14219 tRNA Arg [KO:K14219]
Afer_R0057	tRNA-Arg; K14219 tRNA Arg [KO:K14219]
Afer_R0048	tRNA-Arg; K14219 tRNA Arg [KO:K14219]
Afer_R0028	tRNA-Arg; K14219 tRNA Arg [KO:K14219]
Afer_R0030	tRNA-Asn; K14220 tRNA Asn [KO:K14220]
Afer_R0053	tRNA-Asp; K14221 tRNA Asp [KO:K14221]
Afer_R0026	tRNA-Cys; K14222 tRNA Cys [KO:K14222]
Afer_R0040	tRNA-Gln; K14223 tRNA Gln [KO:K14223]
Afer_R0019	tRNA-Gln; K14223 tRNA Gln [KO:K14223]
Afer_R0052	tRNA-Glu; K14224 tRNA Glu [KO:K14224]
Afer_R0039	tRNA-Glu; K14224 tRNA Glu [KO:K14224]
Afer_R0018	tRNA-Gly; K14225 tRNA Gly [KO:K14225]
Afer_R0016	tRNA-Gly; K14225 tRNA Gly [KO:K14225]
Afer_R0002	tRNA-Gly; K14225 tRNA Gly [KO:K14225]
Afer_R0034	tRNA-His; K14226 tRNA His [KO:K14226]
Afer_R0001	tRNA-Ile; K14227 tRNA Ile [KO:K14227]
Afer_R0025	tRNA-Leu; K14228 tRNA Leu [KO:K14228]
Afer_R0003	tRNA-Leu; K14228 tRNA Leu [KO:K14228]
Afer_R0045	tRNA-Leu; K14228 tRNA Leu [KO:K14228]
Afer_R0046	tRNA-Leu; K14228 tRNA Leu [KO:K14228]
Afer_R0024	tRNA-Leu; K14228 tRNA Leu [KO:K14228]
Afer_R0033	tRNA-Lys; K14229 tRNA Lys [KO:K14229]
Afer_R0036	tRNA-Lys; K14229 tRNA Lys [KO:K14229]
Afer_R0012	tRNA-Met; K14230 tRNA Met [KO:K14230]
Afer_R0050	tRNA-Met; K14230 tRNA Met [KO:K14230]
Afer_R0029	tRNA-Met; K14230 tRNA Met [KO:K14230]
Afer_R0054	tRNA-Phe; K14231 tRNA Phe [KO:K14231]
Afer_R0008	tRNA-Pro; K14232 tRNA Pro [KO:K14232]
Afer_R0015	tRNA-Pro; K14232 tRNA Pro [KO:K14232]
Afer_R0035	tRNA-Pro; K14232 tRNA Pro [KO:K14232]
Afer_R0004	tRNA-Ser; K14233 tRNA Ser [KO:K14233]
Afer_R0006	tRNA-Ser; K14233 tRNA Ser [KO:K14233]
Afer_R0056	tRNA-Ser; K14233 tRNA Ser [KO:K14233]
Afer_R0005	tRNA-Ser; K14233 tRNA Ser [KO:K14233]
Afer_R0011	tRNA-Thr; K14234 tRNA Thr [KO:K14234]
Afer_R0009	tRNA-Thr; K14234 tRNA Thr [KO:K14234]
Afer_R0051	tRNA-Thr; K14234 tRNA Thr [KO:K14234]
Afer_R0013	tRNA-Trp; K14235 tRNA Trp [KO:K14235]
Afer_R0010	tRNA-Tyr; K14236 tRNA Tyr [KO:K14236]
Afer_R0027	tRNA-Val; K14237 tRNA Val [KO:K14237]
Afer_R0037	tRNA-Val; K14237 tRNA Val [KO:K14237]
Afer_R0014	tRNA-Val; K14237 tRNA Val [KO:K14237]
Afer_1528	glutamyl-tRNA synthetase; K01885 glutamyl-tRNA synthetase [EC:6.1.1.17] [KO:K01885] [EC:6.1.1.17]
Afer_1550	glutamyl-tRNA(Gln) amidotransferase subunit A; K02433 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] [KO:K02433] [EC:6.3.5.7 6.3.5.6]
Afer_1549	glutamyl-tRNA(Gln) amidotransferase subunit B; K02434 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] [KO:K02434] [EC:6.3.5.7 6.3.5.6]
Afer_1551	glutamyl-tRNA(Gln) amidotransferase subunit C; K02435 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] [KO:K02435] [EC:6.3.5.7 6.3.5.6]
Afer_0951	alanyl-tRNA synthetase; K01872 alanyl-tRNA synthetase [EC:6.1.1.7] [KO:K01872] [EC:6.1.1.7]
Afer_0534	aspartyl-tRNA synthetase; K01876 aspartyl-tRNA synthetase [EC:6.1.1.12] [KO:K01876] [EC:6.1.1.12]
Afer_1263	glycyl-tRNA synthetase; K01880 glycyl-tRNA synthetase [EC:6.1.1.14] [KO:K01880] [EC:6.1.1.14]
Afer_1229	threonyl-tRNA synthetase; K01868 threonyl-tRNA synthetase [EC:6.1.1.3] [KO:K01868] [EC:6.1.1.3]
Afer_0190	seryl-tRNA synthetase; K01875 seryl-tRNA synthetase [EC:6.1.1.11] [KO:K01875] [EC:6.1.1.11]
Afer_0306	cysteinyl-tRNA synthetase; K01883 cysteinyl-tRNA synthetase [EC:6.1.1.16] [KO:K01883] [EC:6.1.1.16]
Afer_0529	methionyl-tRNA synthetase; K01874 methionyl-tRNA synthetase [EC:6.1.1.10] [KO:K01874] [EC:6.1.1.10]
Afer_1687	methionyl-tRNA formyltransferase; K00604 methionyl-tRNA formyltransferase [EC:2.1.2.9] [KO:K00604] [EC:2.1.2.9]
Afer_0307	valS; valyl-tRNA synthetase [KO:K01873] [EC:6.1.1.9]
Afer_1322	leucyl-tRNA synthetase; K01869 leucyl-tRNA synthetase [EC:6.1.1.4] [KO:K01869] [EC:6.1.1.4]
Afer_1212	isoleucyl-tRNA synthetase; K01870 isoleucyl-tRNA synthetase [EC:6.1.1.5] [KO:K01870] [EC:6.1.1.5]
Afer_1906	lysyl-tRNA synthetase; K04567 lysyl-tRNA synthetase, class II [EC:6.1.1.6] [KO:K04567] [EC:6.1.1.6]
Afer_1815	arginyl-tRNA synthetase; K01887 arginyl-tRNA synthetase [EC:6.1.1.19] [KO:K01887] [EC:6.1.1.19]
Afer_0634	prolyl-tRNA synthetase; K01881 prolyl-tRNA synthetase [EC:6.1.1.15] [KO:K01881] [EC:6.1.1.15]
Afer_0082	Histidine--tRNA ligase; K01892 histidyl-tRNA synthetase [EC:6.1.1.21] [KO:K01892] [EC:6.1.1.21]
Afer_1674	phenylalanyl-tRNA synthetase subunit alpha; K01889 phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] [KO:K01889] [EC:6.1.1.20]
Afer_1673	phenylalanyl-tRNA synthetase subunit beta; K01890 phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] [KO:K01890] [EC:6.1.1.20]
Afer_1624	tyrosyl-tRNA synthetase; K01866 tyrosyl-tRNA synthetase [EC:6.1.1.1] [KO:K01866] [EC:6.1.1.1]
Afer_0915	tryptophanyl-tRNA synthetase; K01867 tryptophanyl-tRNA synthetase [EC:6.1.1.2] [KO:K01867] [EC:6.1.1.2]

Compound

C00025	L-Glutamate
C00037	Glycine
C00041	L-Alanine
C00047	L-Lysine
C00049	L-Aspartate
C00062	L-Arginine
C00064	L-Glutamine
C00065	L-Serine
C00073	L-Methionine
C00078	L-Tryptophan
C00079	L-Phenylalanine
C00082	L-Tyrosine
C00097	L-Cysteine
C00101	Tetrahydrofolate
C00123	L-Leucine
C00135	L-Histidine
C00148	L-Proline
C00152	L-Asparagine
C00183	L-Valine
C00188	L-Threonine
C00234	10-Formyltetrahydrofolate
C00407	L-Isoleucine
C00886	L-Alanyl-tRNA
C01005	O-Phospho-L-serine
C01931	L-Lysyl-tRNA
C02047	L-Leucyl-tRNA
C02163	L-Arginyl-tRNA(Arg)
C02282	Glutaminyl-tRNA
C02412	Glycyl-tRNA(Gly)
C02430	L-Methionyl-tRNA
C02553	L-Seryl-tRNA(Ser)
C02554	L-Valyl-tRNA(Val)
C02702	L-Prolyl-tRNA(Pro)
C02839	L-Tyrosyl-tRNA(Tyr)
C02984	L-Aspartyl-tRNA(Asp)
C02987	L-Glutamyl-tRNA(Glu)
C02988	L-Histidyl-tRNA(His)
C02992	L-Threonyl-tRNA(Thr)
C03125	L-Cysteinyl-tRNA(Cys)
C03127	L-Isoleucyl-tRNA(Ile)
C03294	N-Formylmethionyl-tRNA
C03402	L-Asparaginyl-tRNA(Asn)
C03511	L-Phenylalanyl-tRNA(Phe)
C03512	L-Tryptophanyl-tRNA(Trp)
C06112	L-Glutamyl-tRNA(Gln)
C06113	L-Aspartyl-tRNA(Asn)
C06481	L-Seryl-tRNA(Sec)
C06482	L-Selenocysteinyl-tRNA(Sec)
C16138	L-Pyrrolysine
C16638	O-Phosphoseryl-tRNA(Sec)
C17022	O-Phosphoseryl-tRNA(Cys)
C17027	L-Pyrrolysyl-tRNA(Pyl)

Reference

PMID:18252769

Authors

Sheppard K, Yuan J, Hohn MJ, Jester B, Devine KM, Soll D

Title

From one amino acid to another: tRNA-dependent amino acid biosynthesis.

Journal

Nucleic Acids Res 36:1813-25 (2008)

Reference

PMID:15314242

Authors

Polycarpo C, Ambrogelly A, Berube A, Winbush SM, McCloskey JA, Crain PF, Wood JL, Soll D

Title

An aminoacyl-tRNA synthetase that specifically activates pyrrolysine.

Journal

Proc Natl Acad Sci U S A 101:12450-4 (2004)

KO pathway

ko00970

All links

Pathway (2)   
   KEGG MODULE (1)   
   BioSystems (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (68)   
   KEGG GENES (68)   
All databases (71)   

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