KEGG   PATHWAY: apu00630
Entry
apu00630                    Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Acetobacter pasteurianus IFO 3283-07
Class
Metabolism; Carbohydrate metabolism
Pathway map
apu00630  Glyoxylate and dicarboxylate metabolism
apu00630

Module
apu_M00621  Glycine cleavage system [PATH:apu00630]
Other DBs
GO: 0046487 0043648
Organism
Acetobacter pasteurianus IFO 3283-07 [GN:apu]
Gene
APA07_07080  acetyl-CoA synthetase [KO:K01895] [EC:6.2.1.1]
APA07_03620  acetyl-CoA synthetase [KO:K01895] [EC:6.2.1.1]
APA07_10670  citrate synthase [KO:K01647] [EC:2.3.3.1]
APA07_25120  aconitate hydratase [KO:K01681] [EC:4.2.1.3]
APA07_13180  catalase [KO:K03781] [EC:1.11.1.6]
APA07_16140  phosphoglycolate phosphatase [KO:K01091] [EC:3.1.3.18]
APA07_06310  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
APA07_19360  serine hydroxymethyl transferase [KO:K00600] [EC:2.1.2.1]
APA07_24220  glycine dehydrogenase [KO:K00281] [EC:1.4.4.2]
APA07_24240  glycine cleavage system T protein [KO:K00605] [EC:2.1.2.10]
APA07_07680  dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
APA07_12150  dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
APA07_24230  glycine cleavage system H protein [KO:K02437]
APA07_05700  glycerate dehydrogenase [KO:K11529] [EC:2.7.1.165]
APA07_00840  glycerate dehydrogenase [KO:K11529] [EC:2.7.1.165]
APA07_04640  aldehyde/betaine dehydrogenase [KO:K07248] [EC:1.2.1.22 1.2.1.21]
APA07_14860  formate dehydrogenase alpha subunit [KO:K00123] [EC:1.17.1.9]
APA07_14850  formate dehydrogenase beta subunit [KO:K00124]
APA07_14840  formate dehydrogenase gamma subunit [KO:K00127]
APA07_05510  formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
APA07_01550  aliphatic amidase [KO:K01455] [EC:3.5.1.49]
APA07_15720  oxalyl-CoA decarboxylase [KO:K01577] [EC:4.1.1.8]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
apu00010  Glycolysis / Gluconeogenesis
apu00020  Citrate cycle (TCA cycle)
apu00030  Pentose phosphate pathway
apu00053  Ascorbate and aldarate metabolism
apu00071  Fatty acid degradation
apu00230  Purine metabolism
apu00250  Alanine, aspartate and glutamate metabolism
apu00260  Glycine, serine and threonine metabolism
apu00620  Pyruvate metabolism
apu00750  Vitamin B6 metabolism
apu00910  Nitrogen metabolism
KO pathway
ko00630   

  All links  
Genome (1)   
   KEGG GENOME (1)   
Gene (22)   
   KEGG GENES (22)   
All databases (23)   

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