KEGG   PATHWAY: atu00230
Entry
atu00230                    Pathway                                
Name
Purine metabolism - Agrobacterium fabrum
Class
Metabolism; Nucleotide metabolism
Pathway map
atu00230  Purine metabolism
atu00230

Module
atu_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:atu00230]
atu_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:atu00230]
atu_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:atu00230]
atu_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:atu00230]
atu_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:atu00230]
atu_M00958  Adenine ribonucleotide degradation, AMP => Urate [PATH:atu00230]
atu_M00959  Guanine ribonucleotide degradation, GMP => Urate [PATH:atu00230]
Other DBs
GO: 0006163 0042278
Organism
Agrobacterium fabrum [GN:atu]
Gene
Atu0137  drm; phosphopentomutase [KO:K01839] [EC:5.4.2.7]
Atu4074  exoC; phosphoglucomutase [KO:K01835] [EC:5.4.2.2]
Atu2218  prsA; ribose-phosphate pyrophosphokinase [KO:K00948] [EC:2.7.6.1]
Atu1075  purF; amidophosphoribosyltransferase [KO:K00764] [EC:2.4.2.14]
Atu0647  purD; phosphoribosylamine--glycine ligase [KO:K01945] [EC:6.3.4.13]
Atu1140  purN; phosphoribosyalaminoimidazole-succinocarboxamide synthase [KO:K11175] [EC:2.1.2.2]
Atu1850  purL; phosphoribosylformylglycinamidine synthetase II [KO:K23269] [EC:6.3.5.3]
Atu1844  purS; Phosphoribosylformylglycinamidine synthetase [KO:K23264] [EC:6.3.5.3]
Atu1845  purQ; phosphoribosylformylglycinamidine synthase I [KO:K23265] [EC:6.3.5.3 3.5.1.2]
Atu1141  garS; Phosphoribosylglycinamide synthetase [KO:K01933] [EC:6.3.3.1]
Atu3755  purK; phosphoribosylaminoimidazole carboxylase, ATPase subunit [KO:K01589] [EC:6.3.4.18]
Atu3754  purE; phosphoribosylaminoimidazole carboxylase catalytic subunit [KO:K01588] [EC:5.4.99.18]
Atu2548  purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [KO:K01923] [EC:6.3.2.6]
Atu1843  purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [KO:K01923] [EC:6.3.2.6]
Atu1841  purB; adenylosuccinate lyase [KO:K01756] [EC:4.3.2.2]
Atu2823  purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase [KO:K00602] [EC:2.1.2.3 3.5.4.10]
Atu2236  apt; adenine phosphoribosyltransferase [KO:K00759] [EC:2.4.2.7]
Atu3770  5'-nucleotidase [KO:K11751] [EC:3.1.3.5 3.6.1.45]
Atu1702  surE; stationary-phase survival protein [KO:K03787] [EC:3.1.3.5 3.1.3.6]
Atu0131  deoD; purine nucleoside phosphorylase [KO:K03783] [EC:2.4.2.1]
Atu2215  conserved hypothetical protein [KO:K05810] [EC:2.4.2.1 2.4.2.28 3.5.4.4]
Atu3604  hpt; hypoxanthine phosphoribosyltransferase [KO:K00760] [EC:2.4.2.8]
Atu0624  guaB; inosine-5`-monophosphate dehydrogenase [KO:K00088] [EC:1.1.1.205]
Atu1122  ndk; nucleoside diphosphate kinase [KO:K00940] [EC:2.7.4.6]
Atu0326  ham1; putative deoxyribonucleotide triphosphate pyrophosphatase [KO:K01519] [EC:3.6.1.66]
Atu1731  gpt; xanthine-guanine phosphoribosyltransferase [KO:K00769] [EC:2.4.2.22]
Atu2309  xdhA; xanthine dehydrogenase [KO:K13481] [EC:1.17.1.4]
Atu2310  xdhB; xanthine dehydrogenase C-terminal subunit [KO:K13482] [EC:1.17.1.4]
Atu5500  dehydrogenase [KO:K11177] [EC:1.17.1.4]
Atu5499  oxidoreductase [KO:K11178] [EC:1.17.1.4]
Atu5498  oxidoreductase with iron-sulfur subunit [KO:K13483]
Atu0281  guaA; GMP synthase [KO:K01951] [EC:6.3.5.2]
Atu2658  guaA; GMP synthase - glutamine amidotransferase protein [KO:K01951] [EC:6.3.5.2]
Atu2315  gda; guanine deaminase [KO:K01487] [EC:3.5.4.3]
Atu1101  gmk; guanylate kinase [KO:K00942] [EC:2.7.4.8]
Atu1733  nrdE; ribonucleoside-diphosphate reductase 2 alpha chain [KO:K00525] [EC:1.17.4.1]
Atu0070  nrdE; ribonucleoside-diphosphate reductase 2 alpha chain [KO:K00525] [EC:1.17.4.1]
Atu0071  nrdF; ribonucleoside-diphosphate reductase 2 beta chain [KO:K00526] [EC:1.17.4.1]
Atu1712  dgt; deoxyguanosinetriphosphate triphosphohydrolase [KO:K01129] [EC:3.1.5.1]
Atu1052  conserved hypothetical protein [KO:K06952] [EC:3.1.3.89]
Atu1030  GTP pyrophosphohydrolase/synthetase, RelA/SpoT family [KO:K01139] [EC:2.7.6.5 3.1.7.2]
Atu0619  exopolyphosphatase [KO:K01524] [EC:3.6.1.11 3.6.1.40]
Atu1145  ppx; exopolyphosphatase [KO:K01524] [EC:3.6.1.11 3.6.1.40]
Atu4013  cyaA; putative adenylate cyclase [KO:K01768] [EC:4.6.1.1]
Atu2580  cyaA; adenylate cyclase [KO:K01768] [EC:4.6.1.1]
Atu1149  cya; adenylate cyclase [KO:K01768] [EC:4.6.1.1]
Atu2447  purA; adenylosuccinate synthetase [KO:K01939] [EC:6.3.4.4]
Atu0136  add; adenosine deaminase [KO:K01488] [EC:3.5.4.4]
Atu1006  amn; AMP nucleosidase [KO:K01241] [EC:3.2.2.4]
Atu2292  adeC; adenine deaminase [KO:K01486] [EC:3.5.4.2]
Atu4426  adeC; adenine deaminase [KO:K01486] [EC:3.5.4.2]
Atu1210  cpdB; putative 2,3-cyclic nucleotide 2-phosphodiesterase/3-nucleotidase [KO:K01119] [EC:3.1.4.16 3.1.3.6]
Atu3730  conserved hypothetical protein [KO:K09769] [EC:3.1.4.16]
Atu1926  adk; adenylate kinase [KO:K00939] [EC:2.7.4.3]
Atu1452  mazG; conserved hypothetical protein [KO:K04765] [EC:3.6.1.9]
Atu0395  conserved hypothetical protein [KO:K03651] [EC:3.1.4.53]
Atu2243  conserved hypothetical protein [KO:K03651] [EC:3.1.4.53]
Atu0816  cysN; sulfate adenylate transferase, subunit 1 [KO:K00956] [EC:2.7.7.4]
Atu0817  sulfate adenylate transferase, subunit 2 [KO:K00957] [EC:2.7.7.4]
Atu6077  monooxygenase [KO:K22879] [EC:1.14.13.113]
Atu5424  oxidoreductase [KO:K22879] [EC:1.14.13.113]
Atu2323  conserved hypothetical protein [KO:K07127] [EC:3.5.2.17]
Atu3085  hydantoin Racemase [KO:K16841] [EC:5.1.99.3]
Atu4704  huy; hydantoin racemase [KO:K16841] [EC:5.1.99.3]
Atu2328  conserved hypothetical protein [KO:K16842] [EC:3.5.2.5]
Atu3205  conserved hypothetical protein [KO:K14977] [EC:3.5.3.26]
Atu2324  allA; ureidoglycolate hydrolase [KO:K01483] [EC:4.3.2.3]
Atu1409  allA; ureidoglycolate hydrolase [KO:K01483] [EC:4.3.2.3]
Atu2401  ureC; urease alpha subunit [KO:K01428] [EC:3.5.1.5]
Atu2405  ureB; urease beta subunit [KO:K01429] [EC:3.5.1.5]
Atu2407  ureA; urease gamma subunit [KO:K01430] [EC:3.5.1.5]
Compound
C00002  ATP
C00008  ADP
C00011  CO2
C00014  Ammonia
C00020  AMP
C00035  GDP
C00037  Glycine
C00039  DNA
C00044  GTP
C00046  RNA
C00048  Glyoxylate
C00053  3'-Phosphoadenylyl sulfate
C00054  Adenosine 3',5'-bisphosphate
C00059  Sulfate
C00064  L-Glutamine
C00081  ITP
C00086  Urea
C00104  IDP
C00117  D-Ribose 5-phosphate
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00130  IMP
C00131  dATP
C00144  GMP
C00147  Adenine
C00169  Carbamoyl phosphate
C00206  dADP
C00209  Oxalate
C00212  Adenosine
C00224  Adenylyl sulfate
C00242  Guanine
C00262  Hypoxanthine
C00286  dGTP
C00288  HCO3-
C00294  Inosine
C00301  ADP-ribose
C00330  Deoxyguanosine
C00360  dAMP
C00361  dGDP
C00362  dGMP
C00366  Urate
C00385  Xanthine
C00387  Guanosine
C00499  Allantoate
C00559  Deoxyadenosine
C00575  3',5'-Cyclic AMP
C00603  (S)-Ureidoglycolate
C00620  alpha-D-Ribose 1-phosphate
C00655  Xanthosine 5'-phosphate
C00700  XTP
C00802  Oxalureate
C00942  3',5'-Cyclic GMP
C01228  Guanosine 3',5'-bis(diphosphate)
C01260  P1,P4-Bis(5'-adenosyl)tetraphosphate
C01261  P1,P4-Bis(5'-guanosyl) tetraphosphate
C01344  dIDP
C01345  dITP
C01367  3'-AMP
C01444  Oxamate
C01762  Xanthosine
C02091  (S)-Ureidoglycine
C02348  (R)(-)-Allantoin
C02350  (S)-Allantoin
C02353  2',3'-Cyclic AMP
C02718  N-Formiminoglycine
C03090  5-Phosphoribosylamine
C03373  Aminoimidazole ribotide
C03483  Adenosine tetraphosphate
C03614  Inosine 5'-tetraphosphate
C03794  N6-(1,2-Dicarboxyethyl)-AMP
C03838  5'-Phosphoribosylglycinamide
C04051  5-Amino-4-imidazolecarboxyamide
C04376  5'-Phosphoribosyl-N-formylglycinamide
C04392  P1,P4-Bis(5'-xanthosyl) tetraphosphate
C04494  Guanosine 3'-diphosphate 5'-triphosphate
C04640  2-(Formamido)-N1-(5'-phosphoribosyl)acetamidine
C04677  1-(5'-Phosphoribosyl)-5-amino-4-imidazolecarboxamide
C04734  1-(5'-Phosphoribosyl)-5-formamido-4-imidazolecarboxamide
C04751  1-(5-Phospho-D-ribosyl)-5-amino-4-imidazolecarboxylate
C04823  1-(5'-Phosphoribosyl)-5-amino-4-(N-succinocarboxamide)-imidazole
C05239  5-Aminoimidazole
C05512  Deoxyinosine
C05513  Urate-3-ribonucleoside
C05515  5-Ureido-4-imidazole carboxylate
C05516  5-Amino-4-imidazole carboxylate
C05993  Acetyl adenylate
C06193  Guanosine 3'-phosphate
C06194  2',3'-Cyclic GMP
C06195  Imidazolone
C06196  2'-Deoxyinosine 5'-phosphate
C06197  P1,P3-Bis(5'-adenosyl) triphosphate
C06433  5'-Benzoylphosphoadenosine
C06435  5'-Butyrylphosphoinosine
C11821  5-Hydroxyisourate
C12248  5-Hydroxy-2-oxo-4-ureido-2,5-dihydro-1H-imidazole-5-carboxylate
C15667  5-Carboxyamino-1-(5-phospho-D-ribosyl)imidazole
C22395  N6-Succino-2-amino-2'-deoxyadenylate
C22441  dZMP
C22442  dZDP
C22443  dZTP
C22499  8-Hydroxyadenine
C22500  2,8-Dihydroxyadenine
Reference
PMID:10601204
  Authors
Cusa E, Obradors N, Baldoma L, Badia J, Aguilar J.
  Title
Genetic analysis of a chromosomal region containing genes required for assimilation of allantoin nitrogen and linked glyoxylate metabolism in Escherichia coli.
  Journal
J Bacteriol 181:7479-84 (1999)
DOI:10.1128/JB.181.24.7479-7484.1999
Reference
PMID:10986234
  Authors
Xi H, Schneider BL, Reitzer L.
  Title
Purine catabolism in Escherichia coli and function of xanthine dehydrogenase in purine salvage.
  Journal
J Bacteriol 182:5332-41 (2000)
DOI:10.1128/JB.182.19.5332-5341.2000
Related
pathway
atu00030  Pentose phosphate pathway
atu00220  Arginine biosynthesis
atu00250  Alanine, aspartate and glutamate metabolism
atu00260  Glycine, serine and threonine metabolism
atu00340  Histidine metabolism
atu00630  Glyoxylate and dicarboxylate metabolism
atu00730  Thiamine metabolism
atu00740  Riboflavin metabolism
atu00790  Folate biosynthesis
KO pathway
ko00230   

  All links  
Genome (1)   
   KEGG GENOME (1)   
Gene (71)   
   KEGG GENES (71)   
All databases (72)   

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