KEGG   PATHWAY: bam00230
Entry
bam00230                    Pathway                                
Name
Purine metabolism - Burkholderia ambifaria AMMD
Class
Metabolism; Nucleotide metabolism
Pathway map
bam00230  Purine metabolism
bam00230

Module
bam_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:bam00230]
bam_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:bam00230]
bam_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:bam00230]
bam_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:bam00230]
bam_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:bam00230]
bam_M00546  Purine degradation, xanthine => urea [PATH:bam00230]
bam_M00958  Adenine ribonucleotide degradation, AMP => Urate [PATH:bam00230]
bam_M00959  Guanine ribonucleotide degradation, GMP => Urate [PATH:bam00230]
Other DBs
GO: 0006163 0042278
Organism
Burkholderia ambifaria AMMD [GN:bam]
Gene
Bamb_2272  NUDIX hydrolase [KO:K01515] [EC:3.6.1.13 3.6.1.-]
Bamb_0772  phosphomannomutase [KO:K15778] [EC:5.4.2.8 5.4.2.2]
Bamb_2862  ribose-phosphate pyrophosphokinase [KO:K00948] [EC:2.7.6.1]
Bamb_3355  amidophosphoribosyltransferase [KO:K00764] [EC:2.4.2.14]
Bamb_2333  phosphoribosylamine--glycine ligase [KO:K01945] [EC:6.3.4.13]
Bamb_2557  formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase [KO:K11175] [EC:2.1.2.2]
Bamb_2358  formate-dependent phosphoribosylglycinamide formyltransferase [KO:K08289] [EC:6.3.1.21]
Bamb_1902  phosphoribosylformylglycinamidine synthase [KO:K01952] [EC:6.3.5.3]
Bamb_0655  phosphoribosylformylglycinamidine cyclo-ligase [KO:K01933] [EC:6.3.3.1]
Bamb_2670  5-(carboxyamino)imidazole ribonucleotide synthase [KO:K01589] [EC:6.3.4.18]
Bamb_2671  5-(carboxyamino)imidazole ribonucleotide mutase [KO:K01588] [EC:5.4.99.18]
Bamb_2672  phosphoribosylaminoimidazole-succinocarboxamide synthase [KO:K01923] [EC:6.3.2.6]
Bamb_0561  Adenylosuccinate lyase [KO:K01756] [EC:4.3.2.2]
Bamb_0584  IMP cyclohydrolase [KO:K00602] [EC:2.1.2.3 3.5.4.10]
Bamb_2844  adenine phosphoribosyltransferase [KO:K00759] [EC:2.4.2.7]
Bamb_1761  5'-nucleotidase [KO:K03787] [EC:3.1.3.5 3.1.3.6]
Bamb_5133  3'-nucleotidase [KO:K03787] [EC:3.1.3.5 3.1.3.6]
Bamb_3969  protein of unknown function DUF1255 [KO:K09913] [EC:2.4.2.1 2.4.2.2]
Bamb_1730  protein of unknown function DUF152 [KO:K05810] [EC:2.4.2.1 2.4.2.28 3.5.4.4]
Bamb_0492  phosphoribosyltransferase [KO:K00760] [EC:2.4.2.8]
Bamb_2024  inosine-5'-monophosphate dehydrogenase [KO:K00088] [EC:1.1.1.205]
Bamb_1753  nucleoside diphosphate kinase [KO:K00940] [EC:2.7.4.6]
Bamb_0856  non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family [KO:K01519] [EC:3.6.1.66]
Bamb_5750  molybdopterin dehydrogenase, FAD-binding protein [KO:K13479] [EC:1.17.1.4]
Bamb_0711  molybdopterin dehydrogenase, FAD-binding protein [KO:K13481] [EC:1.17.1.4]
Bamb_0712  xanthine dehydrogenase, molybdenum binding subunit apoprotein / Xanthine oxidase [KO:K13482] [EC:1.17.1.4]
Bamb_2999  xanthine dehydrogenase, molybdenum binding subunit apoprotein [KO:K11177] [EC:1.17.1.4]
Bamb_3000  molybdopterin dehydrogenase, FAD-binding protein [KO:K11178] [EC:1.17.1.4]
Bamb_3001  ferredoxin; (2Fe-2S)-binding domain protein [KO:K13483]
Bamb_3852  (2Fe-2S)-binding domain protein [KO:K13483]
Bamb_0062  glutamine amidotransferase class-I [KO:K01951] [EC:6.3.5.2]
Bamb_2022  GMP synthase (glutamine-hydrolyzing) [KO:K01951] [EC:6.3.5.2]
Bamb_0881  guanine deaminase [KO:K01487] [EC:3.5.4.3]
Bamb_0859  guanylate kinase [KO:K00942] [EC:2.7.4.8]
Bamb_0497  ribonucleoside-diphosphate reductase, alpha subunit [KO:K00525] [EC:1.17.4.1]
Bamb_0498  Ribonucleoside-diphosphate reductase [KO:K00526] [EC:1.17.4.1]
Bamb_0313  putative deoxyguanosinetriphosphate triphosphohydrolase [KO:K01129] [EC:3.1.5.1]
Bamb_5977  metal dependent phosphohydrolase [KO:K01139] [EC:2.7.6.5 3.1.7.2]
Bamb_0861  (p)ppGpp synthetase I, SpoT/RelA [KO:K01139] [EC:2.7.6.5 3.1.7.2]
Bamb_1185  Ppx/GppA phosphatase [KO:K01524] [EC:3.6.1.11 3.6.1.40]
Bamb_1358  (p)ppGpp synthetase I, SpoT/RelA [KO:K00951] [EC:2.7.6.5]
Bamb_1739  Adenylosuccinate synthetase [KO:K01939] [EC:6.3.4.4]
Bamb_5997  Adenylosuccinate synthetase [KO:K01939] [EC:6.3.4.4]
Bamb_0502  PfkB domain protein [KO:K00856] [EC:2.7.1.20]
Bamb_3237  AMP nucleosidase [KO:K01241] [EC:3.2.2.4]
Bamb_0883  adenosine deaminase [KO:K21053] [EC:3.5.4.2]
Bamb_2951  5'-Nucleotidase domain protein [KO:K01119] [EC:3.1.4.16 3.1.3.6]
Bamb_2596  Adenylate kinase [KO:K00939] [EC:2.7.4.3]
Bamb_1113  metallophosphoesterase [KO:K03651] [EC:3.1.4.53]
Bamb_0743  Bis(5'nucleosyl)-tetraphosphatase, ApaH [KO:K01525] [EC:3.6.1.41]
Bamb_0664  adenylylsulfate kinase [KO:K00860] [EC:2.7.1.25]
Bamb_2520  sulfate adenylyltransferase subunit 1 [KO:K00956] [EC:2.7.7.4]
Bamb_2521  sulfate adenylyltransferase subunit 2 [KO:K00957] [EC:2.7.7.4]
Bamb_5315  FAD dependent oxidoreductase [KO:K22879] [EC:1.14.13.113]
Bamb_6485  putative oxidoreductase [KO:K22879] [EC:1.14.13.113]
Bamb_1945  Transthyretin [KO:K07127] [EC:3.5.2.17]
Bamb_1950  conserved hypothetical protein [KO:K13485] [EC:4.1.1.97]
Bamb_1952  Asp/Glu racemase [KO:K16841] [EC:5.1.99.3]
Bamb_1951  polysaccharide deacetylase [KO:K16842] [EC:3.5.2.5]
Bamb_0542  Allantoicase [KO:K01477] [EC:3.5.3.4]
Bamb_1949  Allantoicase [KO:K01477] [EC:3.5.3.4]
Bamb_4787  protein of unknown function DUF861, cupin_3 [KO:K14977] [EC:3.5.3.26]
Bamb_0543  Ureidoglycolate hydrolase [KO:K01483] [EC:4.3.2.3]
Bamb_1948  Ureidoglycolate hydrolase [KO:K01483] [EC:4.3.2.3]
Bamb_4846  5-carboxymethyl-2-hydroxymuconate delta-isomerase [KO:K16856] [EC:4.3.2.3]
Bamb_0779  urease, Metallo peptidase, MEROPS family M38 [KO:K01428] [EC:3.5.1.5]
Bamb_0780  urease, beta subunit [KO:K01429] [EC:3.5.1.5]
Bamb_0781  urease, gamma subunit [KO:K01430] [EC:3.5.1.5]
Compound
C00002  ATP
C00008  ADP
C00011  CO2
C00014  Ammonia
C00020  AMP
C00035  GDP
C00037  Glycine
C00039  DNA
C00044  GTP
C00046  RNA
C00048  Glyoxylate
C00053  3'-Phosphoadenylyl sulfate
C00054  Adenosine 3',5'-bisphosphate
C00059  Sulfate
C00064  L-Glutamine
C00081  ITP
C00086  Urea
C00104  IDP
C00117  D-Ribose 5-phosphate
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00130  IMP
C00131  dATP
C00144  GMP
C00147  Adenine
C00169  Carbamoyl phosphate
C00206  dADP
C00209  Oxalate
C00212  Adenosine
C00224  Adenylyl sulfate
C00242  Guanine
C00262  Hypoxanthine
C00286  dGTP
C00288  HCO3-
C00294  Inosine
C00301  ADP-ribose
C00330  Deoxyguanosine
C00360  dAMP
C00361  dGDP
C00362  dGMP
C00366  Urate
C00385  Xanthine
C00387  Guanosine
C00499  Allantoate
C00559  Deoxyadenosine
C00575  3',5'-Cyclic AMP
C00603  (S)-Ureidoglycolate
C00620  alpha-D-Ribose 1-phosphate
C00655  Xanthosine 5'-phosphate
C00700  XTP
C00802  Oxalureate
C00942  3',5'-Cyclic GMP
C01228  Guanosine 3',5'-bis(diphosphate)
C01260  P1,P4-Bis(5'-adenosyl)tetraphosphate
C01261  P1,P4-Bis(5'-guanosyl) tetraphosphate
C01344  dIDP
C01345  dITP
C01367  3'-AMP
C01444  Oxamate
C01762  Xanthosine
C02091  (S)-Ureidoglycine
C02348  (R)(-)-Allantoin
C02350  (S)-Allantoin
C02353  2',3'-Cyclic AMP
C02718  N-Formiminoglycine
C03090  5-Phosphoribosylamine
C03373  Aminoimidazole ribotide
C03483  Adenosine tetraphosphate
C03614  Inosine 5'-tetraphosphate
C03794  N6-(1,2-Dicarboxyethyl)-AMP
C03838  5'-Phosphoribosylglycinamide
C04051  5-Amino-4-imidazolecarboxyamide
C04376  5'-Phosphoribosyl-N-formylglycinamide
C04392  P1,P4-Bis(5'-xanthosyl) tetraphosphate
C04494  Guanosine 3'-diphosphate 5'-triphosphate
C04640  2-(Formamido)-N1-(5'-phosphoribosyl)acetamidine
C04677  1-(5'-Phosphoribosyl)-5-amino-4-imidazolecarboxamide
C04734  1-(5'-Phosphoribosyl)-5-formamido-4-imidazolecarboxamide
C04751  1-(5-Phospho-D-ribosyl)-5-amino-4-imidazolecarboxylate
C04823  1-(5'-Phosphoribosyl)-5-amino-4-(N-succinocarboxamide)-imidazole
C05239  5-Aminoimidazole
C05512  Deoxyinosine
C05513  Urate-3-ribonucleoside
C05515  5-Ureido-4-imidazole carboxylate
C05516  5-Amino-4-imidazole carboxylate
C05993  Acetyl adenylate
C06193  Guanosine 3'-phosphate
C06194  2',3'-Cyclic GMP
C06195  Imidazolone
C06196  2'-Deoxyinosine 5'-phosphate
C06197  P1,P3-Bis(5'-adenosyl) triphosphate
C06433  5'-Benzoylphosphoadenosine
C06435  5'-Butyrylphosphoinosine
C11821  5-Hydroxyisourate
C12248  5-Hydroxy-2-oxo-4-ureido-2,5-dihydro-1H-imidazole-5-carboxylate
C15667  5-Carboxyamino-1-(5-phospho-D-ribosyl)imidazole
C22395  N6-Succino-2-amino-2'-deoxyadenylate
C22441  dZMP
C22442  dZDP
C22443  dZTP
C22499  8-Hydroxyadenine
C22500  2,8-Dihydroxyadenine
Reference
PMID:10601204
  Authors
Cusa E, Obradors N, Baldoma L, Badia J, Aguilar J.
  Title
Genetic analysis of a chromosomal region containing genes required for assimilation of allantoin nitrogen and linked glyoxylate metabolism in Escherichia coli.
  Journal
J Bacteriol 181:7479-84 (1999)
DOI:10.1128/JB.181.24.7479-7484.1999
Reference
PMID:10986234
  Authors
Xi H, Schneider BL, Reitzer L.
  Title
Purine catabolism in Escherichia coli and function of xanthine dehydrogenase in purine salvage.
  Journal
J Bacteriol 182:5332-41 (2000)
DOI:10.1128/JB.182.19.5332-5341.2000
Related
pathway
bam00030  Pentose phosphate pathway
bam00220  Arginine biosynthesis
bam00250  Alanine, aspartate and glutamate metabolism
bam00260  Glycine, serine and threonine metabolism
bam00340  Histidine metabolism
bam00630  Glyoxylate and dicarboxylate metabolism
bam00730  Thiamine metabolism
bam00740  Riboflavin metabolism
bam00790  Folate biosynthesis
KO pathway
ko00230   

  All links  
Genome (1)   
   KEGG GENOME (1)   
Gene (68)   
   KEGG GENES (68)   
All databases (69)   

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