KEGG   PATHWAY: blo00970
Entry
blo00970                    Pathway                                
Name
Aminoacyl-tRNA biosynthesis - Bifidobacterium longum NCC2705
Class
Genetic Information Processing; Translation
Pathway map
blo00970  Aminoacyl-tRNA biosynthesis
blo00970

Organism
Bifidobacterium longum NCC2705 [GN:blo]
Gene
tRNA-Ala-3  tRNA-Ala-3; tRNA-Ala [KO:K14218]
tRNA-Ala-4  tRNA-Ala-4; tRNA-Ala [KO:K14218]
tRNA-Ala  tRNA-Ala; tRNA-Ala [KO:K14218]
tRNA-Ala-2  tRNA-Ala-2; tRNA-Ala [KO:K14218]
tRNA-Arg  tRNA-Arg; tRNA-Arg [KO:K14219]
tRNA-Arg-2  tRNA-Arg-2; tRNA-Arg [KO:K14219]
tRNA-Arg-3  tRNA-Arg-3; tRNA-Arg [KO:K14219]
tRNA-Arg-5  tRNA-Arg-5; tRNA-Arg [KO:K14219]
tRNA-Arg-4  tRNA-Arg-4; tRNA-Arg [KO:K14219]
tRNA-Asn  tRNA-Asn; tRNA-Asn [KO:K14220]
tRNA-Asn-2  tRNA-Asn-2; tRNA-Asn [KO:K14220]
tRNA-Asn-3  tRNA-Asn-3; tRNA-Asn [KO:K14220]
tRNA-Asp  tRNA-Asp; tRNA-Asp [KO:K14221]
tRNA-Asp-2  tRNA-Asp-2; tRNA-Asp [KO:K14221]
tRNA-Cys  tRNA-Cys; tRNA-Cys [KO:K14222]
tRNA-Gln-2  tRNA-Gln-2; tRNA-Gln [KO:K14223]
tRNA-Gln  tRNA-Gln; tRNA-Gln [KO:K14223]
tRNA-Glu-2  tRNA-Glu-2; tRNA-Glu [KO:K14224]
tRNA-Glu  tRNA-Glu; tRNA-Glu [KO:K14224]
tRNA-Gly-5  tRNA-Gly-5; tRNA-Gly [KO:K14225]
tRNA-Gly-2  tRNA-Gly-2; tRNA-Gly [KO:K14225]
tRNA-Gly  tRNA-Gly; tRNA-Gly [KO:K14225]
tRNA-Gly-3  tRNA-Gly-3; tRNA-Gly [KO:K14225]
tRNA-Gly-4  tRNA-Gly-4; tRNA-Gly [KO:K14225]
tRNA-His  tRNA-His; tRNA-His [KO:K14226]
tRNA-Ile  tRNA-Ile; tRNA-Ile [KO:K14227]
tRNA-Leu-5  tRNA-Leu-5; tRNA-Leu [KO:K14228]
tRNA-Leu  tRNA-Leu; tRNA-Leu [KO:K14228]
tRNA-Leu-2  tRNA-Leu-2; tRNA-Leu [KO:K14228]
tRNA-Leu-3  tRNA-Leu-3; tRNA-Leu [KO:K14228]
tRNA-Leu-4  tRNA-Leu-4; tRNA-Leu [KO:K14228]
tRNA-Lys  tRNA-Lys; tRNA-Lys [KO:K14229]
tRNA-Lys-2  tRNA-Lys-2; tRNA-Lys [KO:K14229]
tRNA-Met  tRNA-Met; tRNA-Met [KO:K14230]
tRNA-Met-2  tRNA-Met-2; tRNA-Met [KO:K14230]
tRNA-Met-3  tRNA-Met-3; tRNA-Met [KO:K14230]
tRNA-Phe  tRNA-Phe; tRNA-Phe [KO:K14231]
tRNA-Pro-2  tRNA-Pro-2; tRNA-Pro [KO:K14232]
tRNA-Pro-3  tRNA-Pro-3; tRNA-Pro [KO:K14232]
tRNA-Pro  tRNA-Pro; tRNA-Pro [KO:K14232]
tRNA-Ser-2  tRNA-Ser-2; tRNA-Ser [KO:K14233]
tRNA-Ser  tRNA-Ser; tRNA-Ser [KO:K14233]
tRNA-Ser-3  tRNA-Ser-3; tRNA-Ser [KO:K14233]
tRNA-Ser-4  tRNA-Ser-4; tRNA-Ser [KO:K14233]
tRNA-Thr-4  tRNA-Thr-4; tRNA-Thr [KO:K14234]
tRNA-Thr-3  tRNA-Thr-3; tRNA-Thr [KO:K14234]
tRNA-Thr  tRNA-Thr; tRNA-Thr [KO:K14234]
tRNA-Thr-2  tRNA-Thr-2; tRNA-Thr [KO:K14234]
tRNA-Trp  tRNA-Trp; tRNA-Trp [KO:K14235]
tRNA-Trp-2  tRNA-Trp-2; tRNA-Trp [KO:K14235]
tRNA-Tyr  tRNA-Tyr; tRNA-Tyr [KO:K14236]
tRNA-Val-3  tRNA-Val-3; tRNA-Val [KO:K14237]
tRNA-Val-4  tRNA-Val-4; tRNA-Val [KO:K14237]
tRNA-Val  tRNA-Val; tRNA-Val [KO:K14237]
tRNA-Val-2  tRNA-Val-2; tRNA-Val [KO:K14237]
tRNA-Val-5  tRNA-Val-5; tRNA-Val [KO:K14237]
BL0469  gltX; glutamyl-tRNA synthetase [KO:K01885] [EC:6.1.1.17]
BL0403  gatA; glutamyl-tRNA(Gln) amidotransferase subunit A [KO:K02433] [EC:6.3.5.6 6.3.5.7]
BL0402  gatB; glutamyl-tRNA(Gln) amidotransferase subunit B [KO:K02434] [EC:6.3.5.6 6.3.5.7]
BL0404  gatC; glutamyl-tRNA(Gln) amidotransferase subunit C [KO:K02435] [EC:6.3.5.6 6.3.5.7]
BL0882  alaS; alanyl-tRNA synthetase [KO:K01872] [EC:6.1.1.7]
BL0018  aspS; aspartyl-tRNA synthetase [KO:K01876] [EC:6.1.1.12]
BL0116  glyS; glycyl-tRNA synthetase [KO:K01880] [EC:6.1.1.14]
BL0724  thrS; threonyl-tRNA synthetase [KO:K01868] [EC:6.1.1.3]
BL1635  serS; seryl-tRNA synthetase [KO:K01875] [EC:6.1.1.11]
BL0301  cysS; cysteinyl-tRNA synthetase 1 [KO:K01883] [EC:6.1.1.16]
BL0170  metG; methionyl-tRNA synthetase [KO:K01874] [EC:6.1.1.10]
BL1789  fmt; methionyl-tRNA formyltransferase [KO:K00604] [EC:2.1.2.9]
BL0395  valS; valyl-tRNA synthetase [KO:K01873] [EC:6.1.1.9]
BL1450  leuS; leucyl-tRNA synthetase [KO:K01869] [EC:6.1.1.4]
BL1777  ileS; isoleucyl-tRNA synthetase [KO:K01870] [EC:6.1.1.5]
BL1654  lysS; lysyl-tRNA synthetase 1 [KO:K04567] [EC:6.1.1.6]
BL1272  argS; arginyl-tRNA synthetase [KO:K01887] [EC:6.1.1.19]
BL1728  proS; prolyl-tRNA synthetase [KO:K01881] [EC:6.1.1.15]
BL0017  hisS; histidyl-tRNA synthetase [KO:K01892] [EC:6.1.1.21]
BL1067  pheS; phenylalanyl-tRNA synthetase alpha chain [KO:K01889] [EC:6.1.1.20]
BL1066  pheT; phenylalanyl-tRNA synthetase beta chain [KO:K01890] [EC:6.1.1.20]
BL1051  tyrS; tyrosyl-tRNA synthetase [KO:K01866] [EC:6.1.1.1]
BL0600  trpS; tryptophanyl-tRNA synthetase [KO:K01867] [EC:6.1.1.2]
Compound
C00025  L-Glutamate
C00037  Glycine
C00041  L-Alanine
C00047  L-Lysine
C00049  L-Aspartate
C00062  L-Arginine
C00064  L-Glutamine
C00065  L-Serine
C00073  L-Methionine
C00078  L-Tryptophan
C00079  L-Phenylalanine
C00082  L-Tyrosine
C00097  L-Cysteine
C00101  Tetrahydrofolate
C00123  L-Leucine
C00135  L-Histidine
C00148  L-Proline
C00152  L-Asparagine
C00183  L-Valine
C00188  L-Threonine
C00234  10-Formyltetrahydrofolate
C00407  L-Isoleucine
C00886  L-Alanyl-tRNA
C01005  O-Phospho-L-serine
C01931  L-Lysyl-tRNA
C02047  L-Leucyl-tRNA
C02163  L-Arginyl-tRNA(Arg)
C02282  Glutaminyl-tRNA
C02412  Glycyl-tRNA(Gly)
C02430  L-Methionyl-tRNA
C02553  L-Seryl-tRNA(Ser)
C02554  L-Valyl-tRNA(Val)
C02702  L-Prolyl-tRNA(Pro)
C02839  L-Tyrosyl-tRNA(Tyr)
C02984  L-Aspartyl-tRNA(Asp)
C02987  L-Glutamyl-tRNA(Glu)
C02988  L-Histidyl-tRNA(His)
C02992  L-Threonyl-tRNA(Thr)
C03125  L-Cysteinyl-tRNA(Cys)
C03127  L-Isoleucyl-tRNA(Ile)
C03294  N-Formylmethionyl-tRNA
C03402  L-Asparaginyl-tRNA(Asn)
C03511  L-Phenylalanyl-tRNA(Phe)
C03512  L-Tryptophanyl-tRNA(Trp)
C06112  L-Glutamyl-tRNA(Gln)
C06113  L-Aspartyl-tRNA(Asn)
C06481  L-Seryl-tRNA(Sec)
C06482  L-Selenocysteinyl-tRNA(Sec)
C16138  L-Pyrrolysine
C16638  O-Phosphoseryl-tRNA(Sec)
C17022  O-Phosphoseryl-tRNA(Cys)
C17027  L-Pyrrolysyl-tRNA(Pyl)
Reference
PMID:18252769
  Authors
Sheppard K, Yuan J, Hohn MJ, Jester B, Devine KM, Soll D
  Title
From one amino acid to another: tRNA-dependent amino acid biosynthesis.
  Journal
Nucleic Acids Res 36:1813-25 (2008)
DOI:10.1093/nar/gkn015
Reference
PMID:15314242
  Authors
Polycarpo C, Ambrogelly A, Berube A, Winbush SM, McCloskey JA, Crain PF, Wood JL, Soll D
  Title
An aminoacyl-tRNA synthetase that specifically activates pyrrolysine.
  Journal
Proc Natl Acad Sci U S A 101:12450-4 (2004)
DOI:10.1073/pnas.0405362101
Related
pathway
blo00250  Alanine, aspartate and glutamate metabolism
blo00260  Glycine, serine and threonine metabolism
blo00270  Cysteine and methionine metabolism
blo00290  Valine, leucine and isoleucine biosynthesis
blo00300  Lysine biosynthesis
blo00330  Arginine and proline metabolism
blo00340  Histidine metabolism
blo00380  Tryptophan metabolism
blo00400  Phenylalanine, tyrosine and tryptophan biosynthesis
KO pathway
ko00970   

  All links  
Genome (1)   
   KEGG GENOME (1)   
Gene (79)   
   KEGG GENES (79)   
All databases (80)   

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