KEGG PATHWAY: bml00240

PATHWAY: bml00240

Entry

bml00240 Pathway

Name

Pyrimidine metabolism - Burkholderia mallei NCTC 10229

Class

Metabolism; Nucleotide metabolism

Pathway map

bml00240

Pyrimidine metabolism

Module

bml_M00046	Pyrimidine degradation, uracil => beta-alanine, thymine => 3-aminoisobutanoate [PATH:bml00240]
bml_M00051	Uridine monophosphate biosynthesis, glutamine (+ PRPP) => UMP [PATH:bml00240]
bml_M00052	Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:bml00240]
bml_M00053	Pyrimidine deoxyribonuleotide biosynthesis, CDP/CTP => dCDP/dCTP,dTDP/dTTP [PATH:bml00240]

Other DBs

BSID:

46507

GO:

0006220

Organism

Burkholderia mallei NCTC 10229 [GN:bml]

Gene

BMA10229_A0585	carB; carbamoyl phosphate synthase large subunit [KO:K01955] [EC:6.3.5.5]
BMA10229_A0587	carA; carbamoyl phosphate synthase small subunit [KO:K01956] [EC:6.3.5.5]
BMA10229_A2749	pyrB; aspartate carbamoyltransferase [KO:K00609] [EC:2.1.3.2]
BMA10229_A1199	pyrC; dihydroorotase [KO:K01465] [EC:3.5.2.3]
BMA10229_A2750	pyrC'; dihydroorotase [KO:K01465] [EC:3.5.2.3]
BMA10229_A0394	pyrD; dihydroorotate dehydrogenase 2 [KO:K00226] [EC:1.3.98.1]
BMA10229_A1968	pyrE; orotate phosphoribosyltransferase [KO:K00762] [EC:2.4.2.10]
BMA10229_A1261	pyrF; orotidine 5'-phosphate decarboxylase [KO:K01591] [EC:4.1.1.23]
BMA10229_A0948	cmk; cytidylate kinase [KO:K00945] [EC:2.7.4.14]
BMA10229_A3257	pyrH; uridylate kinase [KO:K09903] [EC:2.7.4.22]
BMA10229_A0059	ndk; nucleoside diphosphate kinase [KO:K00940] [EC:2.7.4.6]
BMA10229_A0742	pnp; polynucleotide phosphorylase [KO:K00962] [EC:2.7.7.8]
BMA10229_A2645	deoxyribonucleotide triphosphate pyrophosphatase; K02428 dITP/XTP pyrophosphatase [EC:3.6.1.19] [KO:K02428] [EC:3.6.1.19]
BMA10229_A3123	pyrG; CTP synthetase [KO:K01937] [EC:6.3.4.2]
BMA10229_A1950	rpoA; DNA-directed RNA polymerase subunit alpha [KO:K03040] [EC:2.7.7.6]
BMA10229_A1914	rpoB; DNA-directed RNA polymerase subunit beta [KO:K03043] [EC:2.7.7.6]
BMA10229_A1915	rpoC; DNA-directed RNA polymerase subunit beta' [KO:K03046] [EC:2.7.7.6]
BMA10229_A2649	rpoZ; DNA-directed RNA polymerase subunit omega [KO:K03060] [EC:2.7.7.6]
BMA10229_1696	polA; DNA polymerase I [KO:K02335] [EC:2.7.7.7]
BMA10229_A0824	dnaE; DNA polymerase III subunit alpha [KO:K02337] [EC:2.7.7.7]
BMA10229_A2236	dnaN; DNA polymerase III subunit beta [KO:K02338] [EC:2.7.7.7]
BMA10229_A0045	DNA polymerase III subunits gamma and tau; K02343 DNA polymerase III subunit gamma/tau [EC:2.7.7.7] [KO:K02343] [EC:2.7.7.7]
BMA10229_A1227	holA; DNA polymerase III subunit delta [KO:K02340] [EC:2.7.7.7]
BMA10229_A3389	holB; DNA polymerase III subunit delta' [KO:K02341] [EC:2.7.7.7]
BMA10229_A1007	DNA polymerase/helicase; K02342 DNA polymerase III subunit epsilon [EC:2.7.7.7] [KO:K02342] [EC:2.7.7.7]
BMA10229_A0597	dnaQ; DNA polymerase III subunit epsilon [KO:K02342] [EC:2.7.7.7]
BMA10229_A2948	DNA polymerase III subunit chi; K02339 DNA polymerase III subunit chi [EC:2.7.7.7] [KO:K02339] [EC:2.7.7.7]
BMA10229_A2987	dcd; deoxycytidine triphosphate deaminase [KO:K01494] [EC:3.5.4.13]
BMA10229_A0050	surE; stationary phase survival protein SurE [KO:K03787] [EC:3.1.3.5]
BMA10229_A0790	upp; uracil phosphoribosyltransferase [KO:K00761] [EC:2.4.2.9]
BMA10229_A2748	pyrR; bifunctional pyrimidine regulatory protein PyrR/uracil phosphoribosyltransferase [KO:K02825] [EC:2.4.2.9]
BMA10229_0327	amaB-2; allantoate amidohydrolase [KO:K01431] [EC:3.5.1.6]
BMA10229_A2666	short chain dehydrogenase/reductase oxidoreductase; K16066 malonic semialdehyde reductase [EC:1.1.1.-] [KO:K16066] [EC:1.1.1.-]
BMA10229_0602	hypothetical protein; K09019 3-hydroxypropanoate dehydrogenase [EC:1.1.1.-] [KO:K09019] [EC:1.1.1.-]
BMA10229_0864	codA; cytosine deaminase [KO:K01485] [EC:3.5.4.1]
BMA10229_A2621	trxB; thioredoxin-disulfide reductase [KO:K00384] [EC:1.8.1.9]
BMA10229_A2904	nrdD; anaerobic ribonucleoside triphosphate reductase [KO:K00527] [EC:1.17.4.2]
BMA10229_1337	ribonucleotide reductase-like protein; K00525 ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] [KO:K00525] [EC:1.17.4.1]
BMA10229_A1290	nrdA; ribonucleotide-diphosphate reductase subunit alpha [KO:K00525] [EC:1.17.4.1]
BMA10229_A1289	nrdB; ribonucleotide-diphosphate reductase subunit beta [KO:K00526] [EC:1.17.4.1]
BMA10229_A1036	dut; deoxyuridine 5'-triphosphate nucleotidohydrolase [KO:K01520] [EC:3.6.1.23]
BMA10229_A0897	thyA; thymidylate synthase [KO:K00560] [EC:2.1.1.45]
BMA10229_A3388	tmk; thymidylate kinase [KO:K00943] [EC:2.7.4.9]
BMA10229_A1360	cpdB; 2`,3`-cyclic-nucleotide 2`-phosphodiesterase [KO:K01119] [EC:3.1.4.16]

Compound

C00015	UDP
C00029	UDP-glucose
C00039	DNA
C00046	RNA
C00055	CMP
C00063	CTP
C00064	L-Glutamine
C00075	UTP
C00086	Urea
C00099	beta-Alanine
C00105	UMP
C00106	Uracil
C00112	CDP
C00119	5-Phospho-alpha-D-ribose 1-diphosphate
C00169	Carbamoyl phosphate
C00178	Thymine
C00214	Thymidine
C00222	3-Oxopropanoate
C00239	dCMP
C00295	Orotate
C00299	Uridine
C00337	(S)-Dihydroorotate
C00342	Thioredoxin
C00343	Thioredoxin disulfide
C00363	dTDP
C00364	dTMP
C00365	dUMP
C00380	Cytosine
C00383	Malonate
C00429	5,6-Dihydrouracil
C00438	N-Carbamoyl-L-aspartate
C00458	dCTP
C00459	dTTP
C00460	dUTP
C00475	Cytidine
C00526	Deoxyuridine
C00672	2-Deoxy-D-ribose 1-phosphate
C00705	dCDP
C00813	Barbiturate
C00881	Deoxycytidine
C00906	5,6-Dihydrothymine
C01013	3-Hydroxypropanoate
C01103	Orotidine 5'-phosphate
C01168	Pseudouridine 5'-phosphate
C01346	dUDP
C01368	3'-UMP
C01563	Carbamate
C02067	Pseudouridine
C02170	Methylmalonate
C02354	2',3'-Cyclic CMP
C02355	2',3'-Cyclic UMP
C02376	5-Methylcytosine
C02642	3-Ureidopropionate
C03997	5-Hydroxymethyldeoxycytidylate
C05100	3-Ureidoisobutyrate
C05145	3-Aminoisobutyric acid
C05281	5-Methylbarbiturate
C05822	3'-CMP
C06198	P1,P4-Bis(5'-uridyl) tetraphosphate
C11038	2'-Deoxy-5-hydroxymethylcytidine-5'-diphosphate
C11039	2'-Deoxy-5-hydroxymethylcytidine-5'-triphosphate
C15607	3-Oxo-3-ureidopropanoate
C20231	(Z)-3-Ureidoacrylate peracid
C20249	(Z)-3-Peroxyaminoacrylate
C20253	Aminoacrylate
C20254	Ureidoacrylate

KO pathway

ko00240

All links

Pathway (3)   
   KEGG MODULE (2)   
   BioSystems (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (44)   
   KEGG GENES (44)   
All databases (48)   

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