| Entry |
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| Name |
Cysteine and methionine metabolism - Bacillus pseudofirmus
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| Description |
Cysteine and methionine are sulfur-containing amino acids. Cysteine is synthesized from serine through different pathways in different organism groups. In bacteria and plants, cysteine is converted from serine (via acetylserine) by transfer of hydrogen sulfide [MD: M00021]. In animals, methionine-derived homocysteine is used as sulfur source and its condensation product with serine (cystathionine) is converted to cysteine [MD: M00338]. Cysteine is metabolized to pyruvate in multiple routes. Methionine is an essential amino acid, which animals cannot synthesize. In bacteria and plants, methionine is synthesized from aspartate [MD: M00017]. S-Adenosylmethionine (SAM), synthesized from methionine and ATP, is a methyl group donor in many important transfer reactions including DNA methylation for regulation of gene expression. SAM may also be used to regenerate methionine in the methionine salvage pathway [MD: M00034].
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| Class |
Metabolism; Amino acid metabolism
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| Pathway map |
| Cysteine and methionine metabolism |

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| Module |
| Methionine biosynthesis, apartate => homoserine => methionine [PATH: bpf00270] | | Cysteine biosynthesis, serine => cysteine [PATH: bpf00270] | | Methionine salvage pathway [PATH: bpf00270] | | | | Cysteine biosynthesis, homocysteine + serine => cysteine [PATH: bpf00270] |
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| Other DBs |
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| Organism |
Bacillus pseudofirmus [GN: bpf]
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| Gene |
| | | | | | | | | | | yitJ; bifunctional homocysteine S-methyltransferase/5,10-methylenetetrahydrofolate reductase [KO: K00547] [EC: 2.1.1.10] | | metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [KO: K00548] [EC: 2.1.1.13] | | 5-methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase; K00549 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC: 2.1.1.14] [KO: K00549] [EC: 2.1.1.14] | | | | S-adenosylmethionine decarboxylase; K01611 S-adenosylmethionine decarboxylase [EC: 4.1.1.50] [KO: K01611] [EC: 4.1.1.50] | | | | 5'-methylthioadenosine nucleosidase; K01243 S-adenosylhomocysteine/5'-methylthioadenosine nucleosidase [EC: 3.2.2.9] [KO: K01243] [EC: 3.2.2.9] | | mtmN; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase [KO: K01243] [EC: 3.2.2.9] | | | | mtnA; methylthioribose-1-phosphate isomerase [KO: K08963] [EC: 5.3.1.23] | | mtnB; methylthioribulose-1-phosphate dehydratase [KO: K08964] [EC: 4.2.1.109] | | mtnW; 2,3-diketo-5-methylthiopentyl-1-phosphate enolase [KO: K08965] [EC: 5.3.2.5] | | mtnX; 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase [KO: K08966] [EC: 3.1.3.87] | | | | transaminase; K08969 aminotransferase [EC:2.6.1.-] [KO: K08969] [EC:2.6.1.-] | | | | | | | | | | | | | | | | | | | | | | | | O-acetylhomoserine aminocarboxypropyltransferase; K01740 O-acetylhomoserine (thiol)-lyase [EC: 2.5.1.49] [KO: K01740] [EC: 2.5.1.49] | | | | | | | | | | | | | | | | |
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| Compound |
| S-Adenosyl-L-methionine | | S-Adenosyl-L-homocysteine | | Pyruvate | | L-Alanine | | L-Aspartate | | Glutathione | | Sulfate | | L-Serine | | L-Methionine | | Sulfite | | L-Cysteine | | 2-Oxobutanoate | | L-Homocysteine | | 5'-Methylthioadenosine | | L-Homoserine | | Hydrogen sulfide | | Thiosulfate | | Methanethiol | | L-Aspartate 4-semialdehyde | | L-Cystine | | L-Cysteate | | 3-Sulfino-L-alanine | | D-Cysteine | | Mercaptopyruvate | | O-Acetyl-L-serine | | O-Phospho-L-serine | | O-Acetyl-L-homoserine | | O-Succinyl-L-homoserine | | S-Adenosylmethioninamine | | 4-Methylthio-2-oxobutanoic acid | | 1-Aminocyclopropane-1-carboxylate | | Homocystine | | Thiocysteine | | Dehydroalanine | | L-Cystathionine | | L-Methionine S-oxide | | 4-Phospho-L-aspartate | | 5-Methylthio-D-ribose | | N-Formylmethionine | | S-Ribosyl-L-homocysteine | | S-Methyl-5-thio-D-ribose 1-phosphate | | S-Methyl-5-thio-D-ribulose 1-phosphate | | Aminoacyl-L-methionine | | S-Glutathionyl-L-cysteine | | 3-Sulfinylpyruvate | | 3-Sulfopyruvate | | 3-Mercaptolactate | | S-Sulfo-L-cysteine | | Ethylene | | 3-(Methylthio)propionic acid | | Sulfur dioxide | | HSO3- | | (S)-3-Sulfolactate | | (2R)-3-Sulfolactate | | 1,2-Dihydroxy-5-(methylthio)pent-1-en-3-one | | 2,3-Diketo-5-methylthiopentyl-1-phosphate | | 2-Hydroxy-3-keto-5-methylthiopentenyl-1-phosphate |
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| Reference |
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| Authors |
Sekowska A, Denervaud V, Ashida H, Michoud K, Haas D, Yokota A, Danchin A. |
| Title |
Bacterial variations on the methionine salvage pathway. |
| Journal |
BMC Microbiol 4:9 (2004) |
| Reference |
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| Authors |
Ashida H, Saito Y, Kojima C, Kobayashi K, Ogasawara N, Yokota A. |
| Title |
A functional link between RuBisCO-like protein of Bacillus and photosynthetic RuBisCO. |
| Journal |
Science 302:286-90 (2003) |
| Reference |
|
| Authors |
Sekowska A, Danchin A. |
| Title |
The methionine salvage pathway in Bacillus subtilis. |
| Journal |
BMC Microbiol 2:8 (2002) |
| Reference |
|
| Authors |
Berger BJ, English S, Chan G, Knodel MH. |
| Title |
Methionine regeneration and aminotransferases in Bacillus subtilis, Bacillus cereus, and Bacillus anthracis. |
| Journal |
J Bacteriol 185:2418-31 (2003) |
| Reference |
|
| Authors |
Goyer A, Collakova E, Shachar-Hill Y, Hanson AD |
| Title |
Functional characterization of a methionine gamma-lyase in Arabidopsis and its implication in an alternative to the reverse trans-sulfuration pathway. |
| Journal |
Plant Cell Physiol 48:232-42 (2007) |
| Reference |
|
| Authors |
Rebeille F, Jabrin S, Bligny R, Loizeau K, Gambonnet B, Van Wilder V, Douce R, Ravanel S |
| Title |
Methionine catabolism in Arabidopsis cells is initiated by a gamma-cleavage process and leads to S-methylcysteine and isoleucine syntheses. |
| Journal |
Proc Natl Acad Sci U S A 103:15687-92 (2006) |
| Reference |
|
| Authors |
Pirkov I, Norbeck J, Gustafsson L, Albers E |
| Title |
A complete inventory of all enzymes in the eukaryotic methionine salvage pathway. |
| Journal |
FEBS J 275:4111-20 (2008) |
| Reference |
|
| Authors |
Ashida H, Saito Y, Kojima C, Yokota A |
| Title |
Enzymatic characterization of 5-methylthioribulose-1-phosphate dehydratase of the methionine salvage pathway in Bacillus subtilis. |
| Journal |
Biosci Biotechnol Biochem 72:959-67 (2008) |
| Reference |
|
| Authors |
Kitabatake M, So MW, Tumbula DL, Soll D |
| Title |
Cysteine biosynthesis pathway in the archaeon Methanosarcina barkeri encoded by acquired bacterial genes? |
| Journal |
J Bacteriol 182:143-5 (2000) |
| Reference |
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| Authors |
Mino K, Ishikawa K |
| Title |
Characterization of a novel thermostable O-acetylserine sulfhydrylase from Aeropyrum pernix K1. |
| Journal |
J Bacteriol 185:2277-84 (2003) |
| Reference |
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| Authors |
Tanabe S |
| Title |
Development of assay methods for endogenous inorganic sulfur compounds and sulfurtransferases and evaluation of the physiological functions of bound sulfur. |
| Journal |
Yakugaku Zasshi 128:881-900 (2008) |
| Reference |
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| Authors |
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds). |
| Title |
[Cellular Functions and Metabolic Maps] (In Japanese) |
| Journal |
Tokyo Kagaku Dojin (1997) |
| Reference |
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| Authors |
Gutierrez JA, Crowder T, Rinaldo-Matthis A, Ho MC, Almo SC, Schramm VL |
| Title |
Transition state analogs of 5'-methylthioadenosine nucleosidase disrupt quorum sensing. |
| Journal |
Nat Chem Biol 5:251-7 (2009) |
| KO pathway |
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