KEGG   PATHWAY: bvi00630
Entry
bvi00630                    Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Burkholderia vietnamiensis G4
Class
Metabolism; Carbohydrate metabolism
Pathway map
bvi00630  Glyoxylate and dicarboxylate metabolism
bvi00630

Module
bvi_M00012  Glyoxylate cycle [PATH:bvi00630]
bvi_M00621  Glycine cleavage system [PATH:bvi00630]
Other DBs
GO: 0046487 0043648
Organism
Burkholderia vietnamiensis G4 [GN:bvi]
Gene
Bcep1808_4997  isocitrate lyase [KO:K01637] [EC:4.1.3.1]
Bcep1808_1954  isocitrate lyase [KO:K01637] [EC:4.1.3.1]
Bcep1808_6566  acetyl-coenzyme A synthetase [KO:K01895] [EC:6.2.1.1]
Bcep1808_2277  acetyl-coenzyme A synthetase [KO:K01895] [EC:6.2.1.1]
Bcep1808_5505  AMP-dependent synthetase and ligase [KO:K01895] [EC:6.2.1.1]
Bcep1808_3336  AMP-dependent synthetase and ligase [KO:K01895] [EC:6.2.1.1]
Bcep1808_6794  malate synthase G [KO:K01638] [EC:2.3.3.9]
Bcep1808_1958  malate synthase A [KO:K01638] [EC:2.3.3.9]
Bcep1808_3817  malate synthase G [KO:K01638] [EC:2.3.3.9]
Bcep1808_4408  malate dehydrogenase (NAD) [KO:K00024] [EC:1.1.1.37]
Bcep1808_3766  malate dehydrogenase (NAD) [KO:K00024] [EC:1.1.1.37]
Bcep1808_4415  citrate synthase [KO:K01647] [EC:2.3.3.1]
Bcep1808_2610  Citrate synthase [KO:K01647] [EC:2.3.3.1]
Bcep1808_4404  aconitase [KO:K01681] [EC:4.2.1.3]
Bcep1808_5672  aconitase [KO:K01682] [EC:4.2.1.3 4.2.1.99]
Bcep1808_5507  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
Bcep1808_5644  3-ketoacyl-CoA thiolase [KO:K00626] [EC:2.3.1.9]
Bcep1808_1717  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
Bcep1808_1836  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
Bcep1808_4015  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
Bcep1808_2877  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
Bcep1808_1716  3-oxoacyl-[acyl-carrier-protein] reductase [KO:K00023] [EC:1.1.1.36]
Bcep1808_2876  3-oxoacyl-[acyl-carrier-protein] reductase [KO:K00023] [EC:1.1.1.36]
Bcep1808_6164  acetoacetyl-CoA reductase [KO:K00023] [EC:1.1.1.36]
Bcep1808_6330  3-oxoacyl-[acyl-carrier-protein] reductase [KO:K00023] [EC:1.1.1.36]
Bcep1808_6060  methylmalonyl-CoA mutase [KO:K01847] [EC:5.4.99.2]
Bcep1808_0695  FAD linked oxidase domain protein [KO:K00104] [EC:1.1.99.14]
Bcep1808_0694  FAD linked oxidase domain protein [KO:K11472] [EC:1.1.99.14]
Bcep1808_0693  protein of unknown function DUF224, cysteine-rich region domain protein [KO:K11473] [EC:1.1.99.14]
Bcep1808_5733  Catalase [KO:K03781] [EC:1.11.1.6]
Bcep1808_0024  Catalase domain protein [KO:K03781] [EC:1.11.1.6]
Bcep1808_6428  D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding protein [KO:K12972] [EC:1.1.1.79 1.1.1.81]
Bcep1808_3047  D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding protein [KO:K12972] [EC:1.1.1.79 1.1.1.81]
Bcep1808_1675  Gluconate 2-dehydrogenase [KO:K00090] [EC:1.1.1.79 1.1.1.81 1.1.1.215]
Bcep1808_1023  D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding protein [KO:K00090] [EC:1.1.1.79 1.1.1.81 1.1.1.215]
Bcep1808_0512  phosphoglycolate phosphatase [KO:K01091] [EC:3.1.3.18]
Bcep1808_1032  HAD-superfamily hydrolase, subfamily IA, variant 1 [KO:K01091] [EC:3.1.3.18]
Bcep1808_5364  Haloacid dehalogenase domain protein hydrolase [KO:K01091] [EC:3.1.3.18]
Bcep1808_2228  L-glutamine synthetase [KO:K01915] [EC:6.3.1.2]
Bcep1808_2237  L-glutamine synthetase [KO:K01915] [EC:6.3.1.2]
Bcep1808_3080  L-glutamine synthetase [KO:K01915] [EC:6.3.1.2]
Bcep1808_5375  glutamine synthetase, catalytic region [KO:K01915] [EC:6.3.1.2]
Bcep1808_6787  L-glutamine synthetase [KO:K01915] [EC:6.3.1.2]
Bcep1808_7032  serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
Bcep1808_3948  serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
Bcep1808_3423  serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
Bcep1808_0738  serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
Bcep1808_0149  glycine dehydrogenase [KO:K00281] [EC:1.4.4.2]
Bcep1808_0151  glycine cleavage system T protein [KO:K00605] [EC:2.1.2.10]
Bcep1808_1476  dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
Bcep1808_2215  dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
Bcep1808_5423  dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
Bcep1808_0150  glycine cleavage system H protein [KO:K02437]
Bcep1808_1802  glyoxylate carboligase [KO:K01608] [EC:4.1.1.47]
Bcep1808_1803  Hydroxypyruvate isomerase [KO:K01816] [EC:5.3.1.22]
Bcep1808_1804  2-hydroxy-3-oxopropionate reductase [KO:K00042] [EC:1.1.1.60]
Bcep1808_1857  Glycerate kinase [KO:K00865] [EC:2.7.1.165]
Bcep1808_3784  tartrate dehydrogenase [KO:K07246] [EC:1.1.1.93 4.1.1.73 1.1.1.83]
Bcep1808_0629  2-keto-3-deoxy-phosphogluconate aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
Bcep1808_5109  Oxalate decarboxylase [KO:K01569] [EC:4.1.1.2]
Bcep1808_0951  formate dehydrogenase delta subunit [KO:K00126] [EC:1.17.1.9]
Bcep1808_0952  formate dehydrogenase alpha subunit [KO:K00123] [EC:1.17.1.9]
Bcep1808_4486  formate dehydrogenase (quinone-dependent) catalytic subunit [KO:K00123] [EC:1.17.1.9]
Bcep1808_4485  formate dehydrogenase (quinone-dependent) catalytic subunit [KO:K00123] [EC:1.17.1.9]
Bcep1808_4487  formate dehydrogenase (quinone-dependent) iron-sulfur subunit [KO:K00124]
Bcep1808_0953  formate dehydrogenase beta subunit [KO:K00124]
Bcep1808_4488  formate dehydrogenase (quinone-dependent) cytochrome b subunit [KO:K00127]
Bcep1808_0954  formate dehydrogenase gamma subunit [KO:K00127]
Bcep1808_2699  Kynurenine formamidase [KO:K07130] [EC:3.5.1.9]
Bcep1808_2886  formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
Bcep1808_3412  formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
Bcep1808_7168  Formamidase [KO:K01455] [EC:3.5.1.49]
Bcep1808_2241  N-formylglutamate amidohydrolase [KO:K01458] [EC:3.5.1.68]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
bvi00010  Glycolysis / Gluconeogenesis
bvi00020  Citrate cycle (TCA cycle)
bvi00030  Pentose phosphate pathway
bvi00053  Ascorbate and aldarate metabolism
bvi00071  Fatty acid degradation
bvi00230  Purine metabolism
bvi00250  Alanine, aspartate and glutamate metabolism
bvi00260  Glycine, serine and threonine metabolism
bvi00620  Pyruvate metabolism
bvi00710  Carbon fixation in photosynthetic organisms
bvi00750  Vitamin B6 metabolism
bvi00910  Nitrogen metabolism
KO pathway
ko00630   

  All links  
Genome (1)   
   KEGG GENOME (1)   
Gene (73)   
   KEGG GENES (73)   
All databases (74)   

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