KEGG   PATHWAY: cdu04145
Entry
cdu04145                    Pathway                                
Name
Phagosome - Candida dubliniensis
Description
Phagocytosis is the process of taking in relatively large particles by a cell, and is a central mechanism in the tissue remodeling, inflammation, and defense against infectious agents. A phagosome is formed when the specific receptors on the phagocyte surface recognize ligands on the particle surface. After formation, nascent phagosomes progressively acquire digestive characteristics. This maturation of phagosomes involves regulated interaction with the other membrane organelles, including recycling endosomes, late endosomes and lysosomes. The fusion of phagosomes and lysosomes releases toxic products that kill most bacteria and degrade them into fragments. However, some bacteria have strategies to escape the bactericidal mechanisms associated with phagocytosis and survive within host phagocytes.
Class
Cellular Processes; Transport and catabolism
Pathway map
cdu04145  Phagosome
cdu04145

Other DBs
GO: 0045335
Organism
Candida dubliniensis [GN:cdu]
Gene
CD36_73930  ER membrane fusion/vesicular trafficking t-SNARE integral membrane protein, putative [KO:K08492]
CD36_29250  R-SNARE protein, putative [KO:K08517]
CD36_13070  RAB family GTPase, putative [KO:K07889]
CD36_33700  GTP-binding protein, putative [KO:K07889]
CD36_06260  PI3-kinase, putative [KO:K00914] [EC:2.7.1.137]
CD36_00670  endosomal protein, putative [KO:K12182]
CD36_81540  A-ATPase subunit, putative [KO:K02145] [EC:7.1.2.2]
CD36_31180  V-ATPase B subunit, putative [KO:K02147]
CD36_22370  V-ATPase C subunit, putative [KO:K02148]
CD36_45890  VMA8; vacuolar ATP synthase subunit putative [KO:K02149]
CD36_26910  VMA4; vacuolar ATP synthase subunit, putative [KO:K02150]
CD36_18790  V-ATPase F subunit, putative [KO:K02151]
CD36_21870  v-ATPase G subunit, putative [KO:K02152]
CD36_10080  v-atpase E subunit, putative [KO:K02153]
CD36_60250  vacuolar ATP synthase subunit A, golgi isoform, putative [KO:K02154]
CD36_44900  vacuolar ATP synthase subunit, putative [KO:K02154]
CD36_12170  v-ATPase D subunit, putative [KO:K02146]
CD36_30500  V-ATPase subunit, putative [KO:K02144]
CD36_71650  proteolipid protein, putative [KO:K02155]
CD36_84330  vacuolar ATP synthase proteolipid subunit, putative [KO:K02155]
CD36_12320  vacuolar ATP synthase proteolipid subunit, putative [KO:K03661]
CD36_02670  Rab-family GTP-binding protein, putative [KO:K07897]
CD36_21200  GTP-binding protein, putative [KO:K07897]
CD36_85190  dynein heavy chain, cytosolic, putative [KO:K10413]
CD36_35360  hypothetical protein [KO:K10415]
CD36_34530  TUB1; tubulin alpha chain, putative [KO:K07374]
CD36_00640  beta tubulin, putative [KO:K07375]
CD36_16790  FAB1; phosphatidylinositol 3,5-kinase, putative [KO:K00921] [EC:2.7.1.150]
CD36_04590  hypothetical protein [KO:K10089]
CD36_05250  protein transport protein sec61 alpha subunit, putative [KO:K10956]
CD36_87680  subunit of Sec61 complex, putative [KO:K10956]
CD36_26470  beta subunit of the Sec61p ER translocation complex, putative [KO:K09481]
CD36_86720  protein transport protein, putative [KO:K07342]
CD36_43770  calnexin precursor, putative [KO:K08054]
CD36_06300  cytokinesis-and cell polarity-associated GTPase, putative [KO:K04392]
Compound
C04549  1-Phosphatidyl-1D-myo-inositol 3-phosphate
Reference
  Authors
Stuart LM, Ezekowitz RA
  Title
Phagocytosis: elegant complexity.
  Journal
Immunity 22:539-50 (2005)
DOI:10.1016/j.immuni.2005.05.002
Reference
  Authors
Tjelle TE, Lovdal T, Berg T
  Title
Phagosome dynamics and function.
  Journal
Reference
  Authors
Dupuy AG, Caron E
  Title
Integrin-dependent phagocytosis: spreading from microadhesion to new concepts.
  Journal
J Cell Sci 121:1773-83 (2008)
DOI:10.1242/jcs.018036
Reference
  Authors
Brumell JH, Grinstein S
  Title
Salmonella redirects phagosomal maturation.
  Journal
Curr Opin Microbiol 7:78-84 (2004)
DOI:10.1016/j.mib.2003.12.005
Reference
  Authors
Huynh KK, Eskelinen EL, Scott CC, Malevanets A, Saftig P, Grinstein S
  Title
LAMP proteins are required for fusion of lysosomes with phagosomes.
  Journal
EMBO J 26:313-24 (2007)
DOI:10.1038/sj.emboj.7601511
Reference
  Authors
Luzio JP, Pryor PR, Bright NA
  Title
Lysosomes: fusion and function.
  Journal
Nat Rev Mol Cell Biol 8:622-32 (2007)
DOI:10.1038/nrm2217
Reference
  Authors
Sumimoto H
  Title
Structure, regulation and evolution of Nox-family NADPH oxidases that produce reactive oxygen species.
  Journal
FEBS J 275:3249-77 (2008)
DOI:10.1111/j.1742-4658.2008.06488.x
Related
pathway
cdu04144  Endocytosis
KO pathway
ko04145   

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