KEGG   PATHWAY: cfa03430
Entry
cfa03430                    Pathway                                
Name
Mismatch repair - Canis lupus familiaris (dog)
Description
DNA mismatch repair (MMR) is a highly conserved biological pathway that plays a key role in maintaining genomic stability. MMR corrects DNA mismatches generated during DNA replication, thereby preventing mutations from becoming permanent in dividing cells. MMR also suppresses homologous recombination and was recently shown to play a role in DNA damage signaling. Defects in MMR are associated with genome-wide instability, predisposition to certain types of cancer including HNPCC, resistance to certain chemotherapeutic agents, and abnormalities in meiosis and sterility in mammalian systems.
The Escherichia coli MMR pathway has been extensively studied and is well characterized. In E. coli, the mismatch-activated MutS-MutL-ATP complex licenses MutH to incise the nearest unmethylated GATC sequence. UvrD and an exonuclease generate a gap. This gap is filled by pol III and DNA ligase. The GATC sites are then methylated by Dam. Several human MMR proteins have been identified based on their homology to E. coli MMR proteins. These include human homologs of MutS and MutL. Although E. coli MutS and MutL proteins are homodimers, human MutS and MutL homologs are heterodimers. The role of hemimethylated dGATC sites as a signal for strand discrimination is not conserved from E. coli to human. Human MMR is presumed to be nick-directed in vivo, and is thought to discriminate daughter and template strands using a strand-specific nick.
Class
Genetic Information Processing; Replication and repair
Pathway map
cfa03430  Mismatch repair
cfa03430

Other DBs
GO: 0006298
Organism
Canis lupus familiaris (dog) [GN:cfa]
Gene
475524  SSBP1; single-stranded DNA-binding protein, mitochondrial [KO:K03111]
479751  PMS2; mismatch repair endonuclease PMS2 isoform X1 [KO:K10858]
477019  MLH1; DNA mismatch repair protein Mlh1 isoform X2 [KO:K08734]
474585  MSH6; DNA mismatch repair protein Msh6 [KO:K08737]
494002  MSH2; DNA mismatch repair protein Msh2 [KO:K08735]
479164  MSH3; DNA mismatch repair protein Msh3 isoform X1 [KO:K08736]
480389  MLH3; DNA mismatch repair protein Mlh3 isoform X3 [KO:K08739]
479112  RFC1; replication factor C subunit 1 isoform X3 [KO:K10754]
478667  RFC4; replication factor C subunit 4 isoform X1 [KO:K10755]
489798  RFC2; replication factor C subunit 2 isoform X1 [KO:K10755]
477499  RFC5; replication factor C subunit 5 isoform X2 [KO:K10756]
477308  RFC3; replication factor C subunit 3 isoform X2 [KO:K10756]
477166  PCNA; proliferating cell nuclear antigen [KO:K04802]
100855525  EXO1; exonuclease 1 isoform X1 [KO:K10746] [EC:3.1.-.-]
100855690  RPA1; replication protein A 70 kDa DNA-binding subunit [KO:K07466]
100856421  RPA2; replication protein A 32 kDa subunit [KO:K10739]
481449  RPA3; replication protein A 14 kDa subunit [KO:K10740]
610047  POLD1; DNA polymerase delta catalytic subunit isoform X1 [KO:K02327] [EC:2.7.7.7]
482686  POLD2; DNA polymerase delta subunit 2 isoform X3 [KO:K02328]
476806  POLD3; DNA polymerase delta subunit 3 isoform X3 [KO:K03504]
611847  DNA polymerase delta subunit 4 isoform X4 [KO:K03505]
100686967  LIG1; DNA ligase 1 isoform X1 [KO:K10747] [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Reference
  Authors
Jiricny J.
  Title
The multifaceted mismatch-repair system.
  Journal
Nat Rev Mol Cell Biol 7:335-46 (2006)
DOI:10.1038/nrm1907
Reference
  Authors
Li GM.
  Title
Mechanisms and functions of DNA mismatch repair.
  Journal
Cell Res 18:85-98 (2008)
DOI:10.1038/cr.2007.115
Reference
  Authors
Marti TM, Kunz C, Fleck O.
  Title
DNA mismatch repair and mutation avoidance pathways.
  Journal
J Cell Physiol 191:28-41 (2002)
DOI:10.1002/jcp.10077
Reference
  Authors
Ikejima M, Shimada T.
  Title
[Molecular mechanism of mismatch repair]
  Journal
Tanpakushitsu Kakusan Koso 46:1124-9 (2001)
Related
pathway
cfa05210  Colorectal cancer
KO pathway
ko03430   

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