KEGG   PATHWAY: dra00750Help
Entry
dra00750                    Pathway                                

Name
Vitamin B6 metabolism - Deinococcus radiodurans
Class
Metabolism; Metabolism of cofactors and vitamins
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Pathway map
Vitamin B6 metabolism
dra00750

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BSID: 
GO: 
Organism
Deinococcus radiodurans [GN:dra]
Gene
pyridoxamine 5-phosphate oxidase; K00275 pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5] [KO:K00275] [EC:1.4.3.5]
pyridoxamine kinase; K00868 pyridoxine kinase [EC:2.7.1.35] [KO:K00868] [EC:2.7.1.35]
threonine synthase; K01733 threonine synthase [EC:4.2.3.1] [KO:K01733] [EC:4.2.3.1]
pyridoxal biosynthesis lyase PdxS; K06215 pyridoxal 5'-phosphate synthase pdxS subunit [EC:4.3.3.6] [KO:K06215] [EC:4.3.3.6]
glutamine amidotransferase subunit PdxT; K08681 5'-phosphate synthase pdxT subunit [EC:4.3.3.6] [KO:K08681] [EC:4.3.3.6]
Compound
C00018  
Pyridoxal phosphate
C00118  
D-Glyceraldehyde 3-phosphate
C00199  
D-Ribulose 5-phosphate
C00232  
Succinate semialdehyde
C00250  
Pyridoxal
C00266  
Glycolaldehyde
C00279  
D-Erythrose 4-phosphate
C00314  
Pyridoxine
C00534  
Pyridoxamine
C00627  
Pyridoxine phosphate
C00647  
Pyridoxamine phosphate
C00847  
4-Pyridoxate
C00971  
4-Pyridoxolactone
C01215  
2-(Acetamidomethylene)succinate
C01270  
3-Hydroxy-2-methylpyridine-5-carboxylate
C03393  
4-Phospho-D-erythronate
C04106  
2-(Hydroxymethyl)-4-oxobutanoate
C04604  
3-Hydroxy-2-methylpyridine-4,5-dicarboxylate
C04690  
2-(Hydroxymethyl)-3-(acetamidomethylene)succinate
C04773  
3-Hydroxy-4-hydroxymethyl-2-methylpyridine-5-carboxylate
C06050  
2-Methyl-3-hydroxy-5-formylpyridine-4-carboxylate
C06051  
Isopyridoxal
C06052  
5-Pyridoxolactone
C06054  
2-Oxo-3-hydroxy-4-phosphobutanoate
C06055  
O-Phospho-4-hydroxy-L-threonine
C06056  
4-Hydroxy-L-threonine
C07335  
2-Amino-3-oxo-4-phosphonooxybutyrate
C11638  
3-Amino-2-oxopropyl phosphate
Reference
  Authors
Tazoe M, Ichikawa K, Hoshino T.
  Title
Biosynthesis of vitamin B(6) in rhizobium.
  Journal
J Biol Chem 275:11300-5 (2000)
Reference
PMID:9696782
  Authors
Yang Y, Zhao G, Man TK, Winkler ME.
  Title
Involvement of the gapA- and epd (gapB)-encoded dehydrogenases in pyridoxal 5'-phosphate coenzyme biosynthesis in Escherichia coli K-12.
  Journal
J Bacteriol 180:4294-9 (1998)
Reference
  Authors
Yeh JI, Du S, Pohl E, Cane DE.
  Title
Multistate binding in pyridoxine 5'-phosphate synthase: 1.96 A crystal structure in complex with 1-deoxy-D-xylulose phosphate.
  Journal
Biochemistry 41:11649-57 (2002)
Reference
  Authors
Laber B, Maurer W, Scharf S, Stepusin K, Schmidt FS.
  Title
Vitamin B6 biosynthesis: formation of pyridoxine 5'-phosphate from 4-(phosphohydroxy)-L-threonine and 1-deoxy-D-xylulose-5-phosphate by PdxA and PdxJ protein.
  Journal
FEBS Lett 449:45-8 (1999)
Reference
  Authors
Tambasco-Studart M, Titiz O, Raschle T, Forster G, Amrhein N, Fitzpatrick TB.
  Title
Vitamin B6 biosynthesis in higher plants.
  Journal
Proc Natl Acad Sci U S A 102:13687-92 (2005)
Reference
  Authors
Nagase T, Mugo AN, Chu HN, Yoshikane Y, Ohnishi K, Yagi T
  Title
The mll6786 gene encodes a repressor protein controlling the degradation pathway  for vitamin B6 in Mesorhizobium loti.
  Journal
FEMS Microbiol Lett 329:116-22 (2012)
KO pathway
 

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