KEGG   PATHWAY: dre04140Help
Entry
dre04140                    Pathway                                

Name
Regulation of autophagy - Danio rerio (zebrafish)
Class
Cellular Processes; Transport and catabolism
BRITE hierarchy
Pathway map
Regulation of autophagy
dre04140

All organismsOrtholog table
Other DBs
BSID: 
GO: 
Organism
Danio rerio (zebrafish) [GN:dre]
Gene
30262  
ins; preproinsulin [KO:K04526]
566735  
insb; preproinsulin b [KO:K04526]
572074  
prkaa2; protein kinase, AMP-activated, alpha 2 catalytic subunit [KO:K07198] [EC:2.7.11.11]
prkaa1; protein kinase, AMP-activated, alpha 1 catalytic subunit [KO:K07198] [EC:2.7.11.11]
ifnphi3; interferon phi 3 [KO:K05414]
360134  
ifnphi1; interferon phi 1 [KO:K05414]
405790  
ifng1-2; interferon, gamma 1-2 [KO:K04687]
558848  
ulk1b; unc-51-like kinase 1b (C. elegans) [KO:K08269] [EC:2.7.11.1]
ulk3; unc-51-like kinase 3 (C. elegans) [KO:K08269] [EC:2.7.11.1]
ulk2; unc-51-like kinase 2 (C. elegans) [KO:K08269] [EC:2.7.11.1]
393405  
atg13; ATG13 autophagy related 13 homolog (S. cerevisiae) [KO:K08331]
564088  
pik3r4; phosphoinositide-3-kinase, regulatory subunit 4 [KO:K08333] [EC:2.7.11.1]
393846  
becn1; beclin 1 (coiled-coil, myosin-like BCL2 interacting protein) [KO:K08334]
407686  
zgc:113944; K17889 beclin 1-associated autophagy-related key regulator [KO:K17889]
548346  
pik3c3; phosphoinositide-3-kinase, class 3 [KO:K00914] [EC:2.7.1.137]
570965  
atg12; ATG12 autophagy related 12 homolog (S. cerevisiae) [KO:K08336]
atg7; ATG7 autophagy related 7 homolog (S. cerevisiae) [KO:K08337]
641330  
atg10; ATG10 autophagy related 10 homolog (S. cerevisiae) [KO:K17888] [EC:6.3.2.19]
494180  
atg5; ATG5 autophagy related 5 homolog (S. cerevisiae) [KO:K08339]
autophagy-related protein 16-2-like; K17890 autophagy-related protein 16, animal type [KO:K17890]
550552  
atg16l1; ATG16 autophagy related 16-like 1 (S. cerevisiae) [KO:K17890]
403036  
gabarapl2; GABA(A) receptor-associated protein-like 2 [KO:K08341]
793200  
gamma-aminobutyric acid receptor-associated protein-like; K08341 GABA(A) receptor-associated protein [KO:K08341]
326974  
gabarapa; GABA(A) receptor-associated protein a [KO:K08341]
554140  
atg4a; ATG4 autophagy related 4 homolog A (S. cerevisiae) [KO:K08342] [EC:3.4.22.-]
415193  
atg4c; autophagy-related 4C (yeast) [KO:K08342] [EC:3.4.22.-]
448859  
atg4b; ATG4 autophagy related 4 homolog B (S. cerevisiae) [KO:K08342] [EC:3.4.22.-]
336632  
apg3l; APG3 autophagy 3-like [KO:K08343] [EC:6.3.2.19]
Compound
C00350  
Phosphatidylethanolamine
C00913  
3-Methyladenine
C01194  
1-Phosphatidyl-D-myo-inositol
C04549  
1-Phosphatidyl-1D-myo-inositol 3-phosphate
C15181  
Wortmannin
Reference
  Authors
Meijer AJ, Codogno P.
  Title
Regulation and role of autophagy in mammalian cells.
  Journal
Int J Biochem Cell Biol 36:2445-62 (2004)
Reference
  Authors
Deretic V.
  Title
Autophagy in innate and adaptive immunity.
  Journal
Trends Immunol 26:523-8 (2005)
Reference
  Authors
Thompson AR, Vierstra RD.
  Title
Autophagic recycling: lessons from yeast help define the process in plants.
  Journal
Curr Opin Plant Biol 8:165-73 (2005)
Reference
  Authors
Levine B, Yuan J.
  Title
Autophagy in cell death: an innocent convict?
  Journal
J Clin Invest 115:2679-88 (2005)
Reference
  Authors
Tanida I, Ueno T, Kominami E.
  Title
LC3 conjugation system in mammalian autophagy.
  Journal
Int J Biochem Cell Biol 36:2503-18 (2004)
Reference
  Authors
Lum JJ, DeBerardinis RJ, Thompson CB.
  Title
Autophagy in metazoans: cell survival in the land of plenty.
  Journal
Nat Rev Mol Cell Biol 6:439-48 (2005)
Reference
  Authors
Reggiori F, Klionsky DJ.
  Title
Autophagosomes: biogenesis from scratch?
  Journal
Curr Opin Cell Biol 17:415-22 (2005)
Reference
  Authors
Klionsky DJ, Emr SD.
  Title
Autophagy as a regulated pathway of cellular degradation.
  Journal
Science 290:1717-21 (2000)
Reference
  Authors
Bechet D, Tassa A, Taillandier D, Combaret L, Attaix D.
  Title
Lysosomal proteolysis in skeletal muscle.
  Journal
Int J Biochem Cell Biol 37:2098-114 (2005)
KO pathway
 

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