KEGG   PATHWAY: dsh00630Help
Entry
dsh00630                    Pathway                                

Name
Glyoxylate and dicarboxylate metabolism - Dinoroseobacter shibae
Class
Metabolism; Carbohydrate metabolism
BRITE hierarchy
Pathway map
Glyoxylate and dicarboxylate metabolism
dsh00630

All organismsOrtholog table
Module
Ethylmalonyl pathway [PATH:dsh00630]
Organism
Dinoroseobacter shibae [GN:dsh]
Gene
glcB; malate synthase G [KO:K01638] [EC:2.3.3.9]
mdh; malate dehydrogenase [KO:K00024] [EC:1.1.1.37]
gltA2; citrate synthase [KO:K01647] [EC:2.3.3.1]
gltA1; citrate synthase [KO:K01647] [EC:2.3.3.1]
acnA; aconitate hydratase [KO:K01681] [EC:4.2.1.3]
acnB; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase [KO:K01682] [EC:4.2.1.99 4.2.1.3]
citE2; citrate lyase subunit beta [KO:K08691] [EC:4.1.3.25 4.1.3.24]
sucD2; succinyl-CoA synthetase subunit alpha [KO:K08692] [EC:6.2.1.9]
sucC2; malate--CoA ligase subunit beta [KO:K14067] [EC:6.2.1.9]
atoB; acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
bktB; beta-ketothiolase [KO:K00626] [EC:2.3.1.9]
thlA; acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
fadA; acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
fabG1; acetoacetyl-CoA reductase [KO:K00023] [EC:1.1.1.36]
putative MaoC-like dehydratase; K17865 3-hydroxybutyryl-CoA dehydratase [EC:4.2.1.55] [KO:K17865] [EC:4.2.1.55]
alcohol dehydrogenase; K14446 crotonyl-CoA carboxylase/reductase [EC:1.3.1.85] [KO:K14446] [EC:1.3.1.85]
putative glyoxalase; K05606 methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1] [KO:K05606] [EC:5.1.99.1]
mutB; methylmalonyl-CoA mutase [KO:K14447]
mmgC; acyl-CoA dehydrogenase [KO:K14448]
putative thiol ester dehydrase/isomerase; K14449 2-methylfumaryl-CoA hydratase [EC:4.2.1.148] [KO:K14449] [EC:4.2.1.148]
pccA; carbamoyl-phosphate synthase L chain ATP-binding [KO:K01965] [EC:6.4.1.3]
pccB; carboxyl transferase [KO:K01966] [EC:6.4.1.3]
bhbA; methylmalonyl-CoA mutase [KO:K01847] [EC:5.4.99.2]
putative citrate lyase subunit beta; K14451 (3S)-malyl-CoA thioesterase [KO:K14451]
FAD-binding oxidoreductase/transferase; K00104 glycolate oxidase [EC:1.1.3.15] [KO:K00104] [EC:1.1.3.15]
hypothetical protein; K11472 glycolate oxidase FAD binding subunit [KO:K11472]
hypothetical protein; K11473 glycolate oxidase iron-sulfur subunit [KO:K11473]
gph; phosphoglycolate phosphatase [KO:K01091] [EC:3.1.3.18]
putative phosphoglycolate phosphatase; K01091 phosphoglycolate phosphatase [EC:3.1.3.18] [KO:K01091] [EC:3.1.3.18]
HAD-like hydrolase; K01091 phosphoglycolate phosphatase [EC:3.1.3.18] [KO:K01091] [EC:3.1.3.18]
HAD-superfamily hydrolase; K01091 phosphoglycolate phosphatase [EC:3.1.3.18] [KO:K01091] [EC:3.1.3.18]
sgaA2; serine--glyoxylate transaminase [KO:K00830] [EC:2.6.1.51 2.6.1.45 2.6.1.44]
putative serine--glyoxylate aminotransferase; K00830 alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51] [KO:K00830] [EC:2.6.1.51 2.6.1.45 2.6.1.44]
putative serine--glyoxylate aminotransferase; K00830 alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51] [KO:K00830] [EC:2.6.1.51 2.6.1.45 2.6.1.44]
sgaA1; serine--glyoxylate aminotransferase [KO:K00830] [EC:2.6.1.51 2.6.1.45 2.6.1.44]
glnT; glutamine synthetase [KO:K01915] [EC:6.3.1.2]
glnA; glutamine synthetase [KO:K01915] [EC:6.3.1.2]
glutamine synthetase; K01915 glutamine synthetase [EC:6.3.1.2] [KO:K01915] [EC:6.3.1.2]
glyA; serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
glyA; serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
gcvH; glycine cleavage system protein H [KO:K02437]
putative isomerase; K01816 hydroxypyruvate isomerase [EC:5.3.1.22] [KO:K01816] [EC:5.3.1.22]
2-hydroxy-3-oxopropionate reductase; K00042 2-hydroxy-3-oxopropionate reductase [EC:1.1.1.60] [KO:K00042] [EC:1.1.1.60]
gyaR; glyoxylate reductase [KO:K00015] [EC:1.1.1.26]
ttuD; hydroxypyruvate reductase [KO:K00050] [EC:1.1.1.81]
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding subunit; K12972 gyoxylate/hydroxypyruvate reductase A [EC:1.1.1.79 1.1.1.81] [KO:K12972] [EC:1.1.1.81 1.1.1.79]
ttuC; tartrate dehydrogenase [KO:K07246] [EC:1.1.1.83 4.1.1.73 1.1.1.93]
eda; KHG/KDPG aldolase [KO:K01625] [EC:4.1.3.42 4.1.2.14]
fdhB; respiratory-chain NADH dehydrogenase domain 51 kDa subunit [KO:K00122] [EC:1.2.1.2]
fdhA; formate dehydrogenase subunit alpha [KO:K00123] [EC:1.2.1.2]
fdnG; formate dehydrogenase subunit alpha [KO:K00123] [EC:1.2.1.2]
fdnH; formate dehydrogenase iron-sulfur subunit [KO:K00124]
fdnI; formate dehydrogenase subunit gamma [KO:K00127]
purU; formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
Compound
C00007  
Oxygen
C00011  
CO2
C00014  
Ammonia
C00022  
Pyruvate
C00024  
Acetyl-CoA
C00025  
L-Glutamate
C00026  
2-Oxoglutarate
C00027  
Hydrogen peroxide
C00036  
Oxaloacetate
C00037  
Glycine
C00042  
Succinate
C00048  
Glyoxylate
C00058  
Formate
C00064  
L-Glutamine
C00065  
L-Serine
C00091  
Succinyl-CoA
C00100  
Propanoyl-CoA
C00136  
Butanoyl-CoA
C00149  
(S)-Malate
C00158  
Citrate
C00160  
Glycolate
C00168  
Hydroxypyruvate
C00197  
3-Phospho-D-glycerate
C00209  
Oxalate
C00258  
D-Glycerate
C00266  
Glycolaldehyde
C00311  
Isocitrate
C00313  
Oxalyl-CoA
C00332  
Acetoacetyl-CoA
C00417  
cis-Aconitate
C00552  
meso-Tartaric acid
C00683  
(S)-Methylmalonyl-CoA
C00798  
Formyl-CoA
C00877  
Crotonoyl-CoA
C00888  
Pentanoyl-CoA
C00898  
(R,R)-Tartaric acid
C00975  
Dihydroxyfumarate
C00988  
2-Phosphoglycolate
C01127  
4-Hydroxy-2-oxoglutarate
C01146  
2-Hydroxy-3-oxopropanoate
C01182  
D-Ribulose 1,5-bisphosphate
C01213  
(R)-Methylmalonyl-CoA
C01380  
Ethylene glycol
C01989  
3-Ethylmalate
C01990  
3-Oxalomalate
C02123  
3-Propylmalate
C02405  
Formyl phosphate
C03217  
2-Hydroxy-3-oxoadipate
C03459  
2-Hydroxy-3-oxosuccinate
C03548  
trans-2,3-Epoxysuccinate
C03561  
(R)-3-Hydroxybutanoyl-CoA
C04348  
L-Malyl-CoA
C06027  
L-erythro-3-Methylmalyl-CoA
C06028  
2-Methylfumaryl-CoA
C06049  
N-Formylderivatives
C18026  
(2S)-Ethylmalonyl-CoA
C18324  
(2S)-Methylsuccinyl-CoA
C20238  
(2R)-Ethylmalonyl-CoA
Reference
PMID:10978349 (EC5.3.1.22)
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta -hydroxyacid dehydrogenases in Escherichia coli and Haemophilusinfluenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
Reference
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
Reference
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
KO pathway
 

DBGET integrated database retrieval system