KEGG   PATHWAY: dsh01100
Entry
dsh01100                    Pathway                                
Name
Metabolic pathways - Dinoroseobacter shibae
Class
Pathway map
dsh01100  Metabolic pathways
dsh01100

Module
dsh_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:dsh01100]
dsh_M00002  Glycolysis, core module involving three-carbon compounds [PATH:dsh01100]
dsh_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:dsh01100]
dsh_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:dsh01100]
dsh_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:dsh01100]
dsh_M00008  Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:dsh01100]
dsh_M00009  Citrate cycle (TCA cycle, Krebs cycle) [PATH:dsh01100]
dsh_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:dsh01100]
dsh_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:dsh01100]
dsh_M00015  Proline biosynthesis, glutamate => proline [PATH:dsh01100]
dsh_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:dsh01100]
dsh_M00017  Methionine biosynthesis, aspartate => homoserine => methionine [PATH:dsh01100]
dsh_M00019  Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:dsh01100]
dsh_M00020  Serine biosynthesis, glycerate-3P => serine [PATH:dsh01100]
dsh_M00021  Cysteine biosynthesis, serine => cysteine [PATH:dsh01100]
dsh_M00022  Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:dsh01100]
dsh_M00023  Tryptophan biosynthesis, chorismate => tryptophan [PATH:dsh01100]
dsh_M00024  Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH:dsh01100]
dsh_M00028  Ornithine biosynthesis, glutamate => ornithine [PATH:dsh01100]
dsh_M00040  Tyrosine biosynthesis, chorismate => arogenate => tyrosine [PATH:dsh01100]
dsh_M00046  Pyrimidine degradation, uracil => beta-alanine, thymine => 3-aminoisobutanoate [PATH:dsh01100]
dsh_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:dsh01100]
dsh_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:dsh01100]
dsh_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:dsh01100]
dsh_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:dsh01100]
dsh_M00082  Fatty acid biosynthesis, initiation [PATH:dsh01100]
dsh_M00083  Fatty acid biosynthesis, elongation [PATH:dsh01100]
dsh_M00086  beta-Oxidation, acyl-CoA synthesis [PATH:dsh01100]
dsh_M00091  Phosphatidylcholine (PC) biosynthesis, PE => PC [PATH:dsh01100]
dsh_M00093  Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:dsh01100]
dsh_M00096  C5 isoprenoid biosynthesis, non-mevalonate pathway [PATH:dsh01100]
dsh_M00118  Glutathione biosynthesis, glutamate => glutathione [PATH:dsh01100]
dsh_M00120  Coenzyme A biosynthesis, pantothenate => CoA [PATH:dsh01100]
dsh_M00122  Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH:dsh01100]
dsh_M00134  Polyamine biosynthesis, arginine => ornithine => putrescine [PATH:dsh01100]
dsh_M00140  C1-unit interconversion, prokaryotes [PATH:dsh01100]
dsh_M00144  NADH:quinone oxidoreductase, prokaryotes [PATH:dsh01100]
dsh_M00149  Succinate dehydrogenase, prokaryotes [PATH:dsh01100]
dsh_M00151  Cytochrome bc1 complex respiratory unit [PATH:dsh01100]
dsh_M00155  Cytochrome c oxidase, prokaryotes [PATH:dsh01100]
dsh_M00156  Cytochrome c oxidase, cbb3-type [PATH:dsh01100]
dsh_M00157  F-type ATPase, prokaryotes and chloroplasts [PATH:dsh01100]
dsh_M00169  CAM (Crassulacean acid metabolism), light [PATH:dsh01100]
dsh_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:dsh01100]
dsh_M00364  C10-C20 isoprenoid biosynthesis, bacteria [PATH:dsh01100]
dsh_M00373  Ethylmalonyl pathway [PATH:dsh01100]
dsh_M00432  Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:dsh01100]
dsh_M00529  Denitrification, nitrate => nitrogen [PATH:dsh01100]
dsh_M00531  Assimilatory nitrate reduction, nitrate => ammonia [PATH:dsh01100]
dsh_M00549  Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:dsh01100]
dsh_M00570  Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:dsh01100]
dsh_M00579  Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:dsh01100]
dsh_M00595  Thiosulfate oxidation by SOX complex, thiosulfate => sulfate [PATH:dsh01100]
dsh_M00621  Glycine cleavage system [PATH:dsh01100]
dsh_M00741  Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH:dsh01100]
dsh_M00793  dTDP-L-rhamnose biosynthesis [PATH:dsh01100]
dsh_M00844  Arginine biosynthesis, ornithine => arginine [PATH:dsh01100]
dsh_M00880  Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:dsh01100]
dsh_M00881  Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:dsh01100]
dsh_M00909  UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:dsh01100]
dsh_M00924  Cobalamin biosynthesis, anaerobic, uroporphyrinogen III => sirohydrochlorin => cobyrinate a,c-diamide [PATH:dsh01100]
dsh_M00958  Adenine ribonucleotide degradation, AMP => Urate [PATH:dsh01100]
dsh_M00959  Guanine ribonucleotide degradation, GMP => Urate [PATH:dsh01100]
dsh_M00970  Proline degradation, proline => glutamate [PATH:dsh01100]
Organism
Dinoroseobacter shibae [GN:dsh]
Related
pathway
dsh00010  Glycolysis / Gluconeogenesis
dsh00020  Citrate cycle (TCA cycle)
dsh00030  Pentose phosphate pathway
dsh00040  Pentose and glucuronate interconversions
dsh00051  Fructose and mannose metabolism
dsh00052  Galactose metabolism
dsh00053  Ascorbate and aldarate metabolism
dsh00061  Fatty acid biosynthesis
dsh00071  Fatty acid degradation
dsh00121  Secondary bile acid biosynthesis
dsh00130  Ubiquinone and other terpenoid-quinone biosynthesis
dsh00190  Oxidative phosphorylation
dsh00220  Arginine biosynthesis
dsh00230  Purine metabolism
dsh00240  Pyrimidine metabolism
dsh00250  Alanine, aspartate and glutamate metabolism
dsh00260  Glycine, serine and threonine metabolism
dsh00261  Monobactam biosynthesis
dsh00270  Cysteine and methionine metabolism
dsh00280  Valine, leucine and isoleucine degradation
dsh00290  Valine, leucine and isoleucine biosynthesis
dsh00300  Lysine biosynthesis
dsh00310  Lysine degradation
dsh00330  Arginine and proline metabolism
dsh00332  Carbapenem biosynthesis
dsh00340  Histidine metabolism
dsh00350  Tyrosine metabolism
dsh00360  Phenylalanine metabolism
dsh00361  Chlorocyclohexane and chlorobenzene degradation
dsh00362  Benzoate degradation
dsh00365  Furfural degradation
dsh00380  Tryptophan metabolism
dsh00400  Phenylalanine, tyrosine and tryptophan biosynthesis
dsh00401  Novobiocin biosynthesis
dsh00405  Phenazine biosynthesis
dsh00410  beta-Alanine metabolism
dsh00430  Taurine and hypotaurine metabolism
dsh00440  Phosphonate and phosphinate metabolism
dsh00450  Selenocompound metabolism
dsh00460  Cyanoamino acid metabolism
dsh00470  D-Amino acid metabolism
dsh00480  Glutathione metabolism
dsh00500  Starch and sucrose metabolism
dsh00511  Other glycan degradation
dsh00520  Amino sugar and nucleotide sugar metabolism
dsh00521  Streptomycin biosynthesis
dsh00523  Polyketide sugar unit biosynthesis
dsh00525  Acarbose and validamycin biosynthesis
dsh00540  Lipopolysaccharide biosynthesis
dsh00541  O-Antigen nucleotide sugar biosynthesis
dsh00543  Exopolysaccharide biosynthesis
dsh00550  Peptidoglycan biosynthesis
dsh00552  Teichoic acid biosynthesis
dsh00561  Glycerolipid metabolism
dsh00562  Inositol phosphate metabolism
dsh00564  Glycerophospholipid metabolism
dsh00600  Sphingolipid metabolism
dsh00620  Pyruvate metabolism
dsh00625  Chloroalkane and chloroalkene degradation
dsh00626  Naphthalene degradation
dsh00627  Aminobenzoate degradation
dsh00630  Glyoxylate and dicarboxylate metabolism
dsh00640  Propanoate metabolism
dsh00643  Styrene degradation
dsh00650  Butanoate metabolism
dsh00660  C5-Branched dibasic acid metabolism
dsh00670  One carbon pool by folate
dsh00680  Methane metabolism
dsh00730  Thiamine metabolism
dsh00740  Riboflavin metabolism
dsh00750  Vitamin B6 metabolism
dsh00760  Nicotinate and nicotinamide metabolism
dsh00770  Pantothenate and CoA biosynthesis
dsh00780  Biotin metabolism
dsh00785  Lipoic acid metabolism
dsh00790  Folate biosynthesis
dsh00860  Porphyrin metabolism
dsh00900  Terpenoid backbone biosynthesis
dsh00903  Limonene degradation
dsh00906  Carotenoid biosynthesis
dsh00907  Pinene, camphor and geraniol degradation
dsh00910  Nitrogen metabolism
dsh00920  Sulfur metabolism
dsh00930  Caprolactam degradation
dsh00946  Degradation of flavonoids
dsh00999  Biosynthesis of various plant secondary metabolites
dsh01040  Biosynthesis of unsaturated fatty acids
KO pathway
ko01100   

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Genome (1)   
   KEGG GENOME (1)   
Gene (839)   
   KEGG GENES (839)   
All databases (840)   

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