KEGG   PATHWAY: ecu03030
Entry
ecu03030                    Pathway                                
Name
DNA replication - Encephalitozoon cuniculi
Description
A complex network of interacting proteins and enzymes is required for DNA replication. Generally, DNA replication follows a multistep enzymatic pathway. At the DNA replication fork, a DNA helicase (DnaB or MCM complex) precedes the DNA synthetic machinery and unwinds the duplex parental DNA in cooperation with the SSB or RPA. On the leading strand, replication occurs continuously in a 5 to 3 direction, whereas on the lagging strand, DNA replication occurs discontinuously by synthesis and joining of short Okazaki fragments. In prokaryotes, the leading strand replication apparatus consists of a DNA polymerase (pol III core), a sliding clamp (beta), and a clamp loader (gamma delta complex). The DNA primase (DnaG) is needed to form RNA primers. Normally, during replication of the lagging-strand DNA template, an RNA primer is removed either by an RNase H or by the 5 to 3 exonuclease activity of DNA pol I, and the DNA ligase joins the Okazaki fragments. In eukaryotes, three DNA polymerases (alpha, delta, and epsilon) have been identified. DNA primase forms a permanent complex with DNA polymerase alpha. PCNA and RFC function as a clamp and a clamp loader. FEN 1 and RNase H1 remove the RNA from the Okazaki fragments and DNA ligase I joins the DNA.
Class
Genetic Information Processing; Replication and repair
Pathway map
ecu03030  DNA replication
ecu03030

Organism
Encephalitozoon cuniculi [GN:ecu]
Gene
ECU10_0600  uncharacterized protein [KO:K07466]
ECU05_1030  uncharacterized protein [KO:K04802]
ECU03_1080  uncharacterized protein [KO:K04799] [EC:3.1.-.-]
ECU02_1220  uncharacterized protein [KO:K10747] [EC:6.5.1.1 6.5.1.6 6.5.1.7]
ECU05_0990  uncharacterized protein [KO:K02320] [EC:2.7.7.7]
ECU10_1080  uncharacterized protein [KO:K02321]
ECU08_0630  uncharacterized protein [KO:K02684] [EC:2.7.7.102]
ECU05_1210  uncharacterized protein [KO:K02685]
ECU09_0430  uncharacterized protein [KO:K02327] [EC:2.7.7.7]
ECU09_0770  uncharacterized protein [KO:K02328]
ECU10_1210  uncharacterized protein [KO:K02324] [EC:2.7.7.7]
ECU05_0330  uncharacterized protein [KO:K02325] [EC:2.7.7.7]
ECU04_0850  uncharacterized protein [KO:K02540] [EC:5.6.2.3]
ECU08_0290  uncharacterized protein [KO:K02541] [EC:5.6.2.3]
ECU02_1150  uncharacterized protein [KO:K02212] [EC:5.6.2.3]
ECU06_0340  uncharacterized protein [KO:K02209] [EC:5.6.2.3]
ECU05_0780  uncharacterized protein [KO:K02542] [EC:5.6.2.3]
ECU09_1360  uncharacterized protein [KO:K02210] [EC:5.6.2.3]
ECU06_0360  uncharacterized protein [KO:K10739]
ECU05_1530  uncharacterized protein [KO:K10754]
ECU09_1330  uncharacterized protein [KO:K10755]
ECU10_0780i  replication factor C subunit 5 [KO:K10756]
ECU02_0290  uncharacterized protein [KO:K10756]
ECU03_0670  ribonuclease H2 catalytic subunit RNH201 [KO:K10743] [EC:3.1.26.4]
Reference
PMID:8087839
  Authors
Stillman B.
  Title
Smart machines at the DNA replication fork.
  Journal
Cell 78:725-8 (1994)
DOI:10.1016/S0092-8674(94)90362-X
Reference
PMID:9759502
  Authors
Waga S, Stillman B.
  Title
The DNA replication fork in eukaryotic cells.
  Journal
Annu Rev Biochem 67:721-51 (1998)
DOI:10.1146/annurev.biochem.67.1.721
KO pathway
ko03030   

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