KEGG   PATHWAY: eok00970Help
Entry
eok00970                    Pathway                                

Name
Aminoacyl-tRNA biosynthesis - Escherichia coli O55:H7 CB9615 (EPEC)
Class
Genetic Information Processing; Translation
BRITE hierarchy
Pathway map
eok00970  Aminoacyl-tRNA biosynthesis
eok00970

Ortholog table
Module
eok_M00360  Aminoacyl-tRNA biosynthesis, prokaryotes [PATH:eok00970]
Organism
Escherichia coli O55:H7 CB9615 (EPEC) [GN:eok]
Gene
G2583_2928  tRNA-Ala [KO:K14218]
G2583_2929  tRNA-Ala [KO:K14218]
G2583_0207  tRNA-Ala [KO:K14218]
G2583_4651  tRNA-Ala [KO:K14218]
G2583_3995  tRNA-Ala [KO:K14218]
G2583_0656  tRNA-Arg [KO:K14219]
G2583_5270  tRNA-Arg [KO:K14219]
G2583_5275  tRNA-Arg [KO:K14219]
G2583_5271  tRNA-Arg [KO:K14219]
G2583_5272  tRNA-Arg [KO:K14219]
G2583_5268  tRNA-Arg [KO:K14219]
G2583_5274  tRNA-Arg [KO:K14219]
G2583_4591  tRNA-Arg [KO:K14219]
G2583_3339  tRNA-Arg [KO:K14219]
G2583_3342  tRNA-Arg [KO:K14219]
G2583_3340  tRNA-Arg [KO:K14219]
G2583_3341  tRNA-Arg [KO:K14219]
G2583_2486  tRNA-Asn [KO:K14220]
G2583_2493  tRNA-Asn [KO:K14220]
G2583_2496  tRNA-Asn [KO:K14220]
G2583_2499  tRNA-Asn [KO:K14220]
G2583_5263  tRNA-Asn [KO:K14220]
G2583_0210  tRNA-Asp [KO:K14221]
G2583_4556  tRNA-Asp [KO:K14221]
G2583_0220  tRNA-Asp [KO:K14221]
G2583_2361  tRNA-Cys [KO:K14222]
G2583_0827  tRNA-Gln [KO:K14223]
G2583_0828  tRNA-Gln [KO:K14223]
G2583_0831  tRNA-Gln [KO:K14223]
G2583_0832  tRNA-Gln [KO:K14223]
G2583_3173  tRNA-Glu [KO:K14224]
G2583_4553  tRNA-Glu [KO:K14224]
G2583_4826  tRNA-Glu [KO:K14224]
G2583_4784  tRNA-Glu [KO:K14224]
G2583_4793  tRNA-Gly [KO:K14225]
G2583_5265  tRNA-Gly [KO:K14225]
G2583_2362  tRNA-Gly [KO:K14225]
G2583_4991  tRNA-Gly [KO:K14225]
G2583_4992  tRNA-Gly [KO:K14225]
G2583_4990  tRNA-Gly [KO:K14225]
G2583_3518  tRNA-Gly [KO:K14225]
G2583_4592  tRNA-His [KO:K14226]
G2583_0206  tRNA-Ile [KO:K14227]
G2583_4650  tRNA-Ile [KO:K14227]
G2583_3996  tRNA-Ile [KO:K14227]
G2583_5095  tRNA-Leu [KO:K14228]
G2583_3899  tRNA-Leu [KO:K14228]
G2583_0833  tRNA-Leu [KO:K14228]
G2583_4593  tRNA-Leu [KO:K14228]
G2583_5171  tRNA-Leu [KO:K14228]
G2583_5278  tRNA-Leu [KO:K14228]
G2583_5277  tRNA-Leu [KO:K14228]
G2583_2360  tRNA-Leu [KO:K14228]
G2583_0910  tRNA-Lys [KO:K14229]
G2583_2938  tRNA-Lys [KO:K14229]
G2583_0914  tRNA-Lys [KO:K14229]
G2583_0912  tRNA-Lys [KO:K14229]
G2583_5266  tRNA-Lys [KO:K14229]
G2583_0915  tRNA-Lys [KO:K14229]
G2583_5267  tRNA-Met [KO:K14230]
G2583_5276  tRNA-Met [KO:K14230]
G2583_5269  tRNA-Met [KO:K14230]
G2583_5273  tRNA-Met [KO:K14230]
G2583_0829  tRNA-Met [KO:K14230]
G2583_0834  tRNA-Met [KO:K14230]
G2583_3303  tRNA-Met [KO:K14230]
G2583_3793  tRNA-Met [KO:K14230]
G2583_3468  tRNA-Met [KO:K14230]
G2583_3469  tRNA-Met [KO:K14230]
G2583_3470  tRNA-Met [KO:K14230]
G2583_3896  tRNA-Met [KO:K14230]
G2583_3626  tRNA-Phe [KO:K14231]
G2583_4961  tRNA-Phe [KO:K14231]
G2583_4282  tRNA-Pro [KO:K14232]
G2583_2732  tRNA-Pro [KO:K14232]
G2583_3343  tRNA-Ser [KO:K14233]
G2583_2484  tRNA-Ser [KO:K14233]
G2583_1206  tRNA-Ser [KO:K14233]
G2583_1120  tRNA-Ser [KO:K14233]
G2583_5264  tRNA-Thr [KO:K14234]
G2583_4794  tRNA-Thr [KO:K14234]
G2583_3992  tRNA-Thr [KO:K14234]
G2583_0280  tRNA-Thr [KO:K14234]
G2583_4791  tRNA-Thr [KO:K14234]
G2583_4557  tRNA-Trp [KO:K14235]
G2583_1503  tRNA-Tyr [KO:K14236]
G2583_1505  tRNA-Tyr [KO:K14236]
G2583_4792  tRNA-Tyr [KO:K14236]
G2583_0911  tRNA-Val [KO:K14237]
G2583_2937  tRNA-Val [KO:K14237]
G2583_2936  tRNA-Val [KO:K14237]
G2583_2935  tRNA-Val [KO:K14237]
G2583_0913  tRNA-Val [KO:K14237]
G2583_2060  tRNA-Val [KO:K14237]
G2583_2061  tRNA-Val [KO:K14237]
G2583_4395  tRNA-Sec [KO:K14238]
G2583_2934  gltX; Glutamyl-tRNA synthetase [KO:K01885] [EC:6.1.1.17]
G2583_0841  glnS; Glutaminyl-tRNA synthetase [KO:K01886] [EC:6.1.1.18]
G2583_3345  alaS; Alanyl-tRNA synthetase [KO:K01872] [EC:6.1.1.7]
G2583_2318  aspS; Aspartyl-tRNA synthetase [KO:K01876] [EC:6.1.1.12]
G2583_1165  asnS; Asparaginyl-tRNA synthetase [KO:K01893] [EC:6.1.1.22]
G2583_4301  glyQ; Glycyl-tRNA synthetase alpha subunit [KO:K01878] [EC:6.1.1.14]
G2583_4300  glyS; Glycyl-tRNA synthetase beta subunit [KO:K01879] [EC:6.1.1.14]
G2583_2166  thrS; Threonyl-tRNA synthetase [KO:K01868] [EC:6.1.1.3]
G2583_1130  serS; Seryl-tRNA synthetase [KO:K01875] [EC:6.1.1.11]
G2583_4327  selA; L-seryl-tRNA(Sec) selenium transferase (Selenocysteine synthase) (Sec synthase) (Selenocysteinyl-tRNA(Sec) synthase) [KO:K01042] [EC:2.9.1.1]
G2583_0646  cysS; Cysteinyl-tRNA synthetase [KO:K01883] [EC:6.1.1.16]
G2583_2650  metG; Methionyl-tRNA synthetase [KO:K01874] [EC:6.1.1.10]
G2583_4006  fmt; Methionyl-tRNA formyltransferase [KO:K00604] [EC:2.1.2.9]
G2583_5088  valS; Valyl-tRNA synthetase [KO:K01873] [EC:6.1.1.9]
G2583_0805  leuS; Leucyl-tRNA synthetase [KO:K01869] [EC:6.1.1.4]
G2583_0027  ileS; Isoleucyl-tRNA synthetase [KO:K01870] [EC:6.1.1.5]
G2583_4956  lysU; Lysyl-tRNA synthetase, heat inducible [KO:K04567] [EC:6.1.1.6]
G2583_3543  lysS; Lysyl-tRNA synthetase [KO:K04567] [EC:6.1.1.6]
G2583_2328  argS; Arginyl-tRNA synthetase [KO:K01887] [EC:6.1.1.19]
G2583_0198  proS; Prolyl-tRNA synthetase [KO:K01881] [EC:6.1.1.15]
G2583_3038  hisS; Histidyl-tRNA synthetase [KO:K01892] [EC:6.1.1.21]
G2583_2161  pheS; Phenylalanyl-tRNA synthetase alpha chain [KO:K01889] [EC:6.1.1.20]
G2583_2160  pheT; Phenylalanyl-tRNA synthetase beta chain [KO:K01890] [EC:6.1.1.20]
G2583_2032  tyrS; Tyrosyl-tRNA synthetase [KO:K01866] [EC:6.1.1.1]
G2583_4081  trpS; Tryptophanyl-tRNA synthetase [KO:K01867] [EC:6.1.1.2]
Compound
C00025  L-Glutamate
C00037  Glycine
C00041  L-Alanine
C00047  L-Lysine
C00049  L-Aspartate
C00062  L-Arginine
C00064  L-Glutamine
C00065  L-Serine
C00073  L-Methionine
C00078  L-Tryptophan
C00079  L-Phenylalanine
C00082  L-Tyrosine
C00097  L-Cysteine
C00101  Tetrahydrofolate
C00123  L-Leucine
C00135  L-Histidine
C00148  L-Proline
C00152  L-Asparagine
C00183  L-Valine
C00188  L-Threonine
C00234  10-Formyltetrahydrofolate
C00407  L-Isoleucine
C00886  L-Alanyl-tRNA
C01005  O-Phospho-L-serine
C01931  L-Lysyl-tRNA
C02047  L-Leucyl-tRNA
C02163  L-Arginyl-tRNA(Arg)
C02282  Glutaminyl-tRNA
C02412  Glycyl-tRNA(Gly)
C02430  L-Methionyl-tRNA
C02553  L-Seryl-tRNA(Ser)
C02554  L-Valyl-tRNA(Val)
C02702  L-Prolyl-tRNA(Pro)
C02839  L-Tyrosyl-tRNA(Tyr)
C02984  L-Aspartyl-tRNA(Asp)
C02987  L-Glutamyl-tRNA(Glu)
C02988  L-Histidyl-tRNA(His)
C02992  L-Threonyl-tRNA(Thr)
C03125  L-Cysteinyl-tRNA(Cys)
C03127  L-Isoleucyl-tRNA(Ile)
C03294  N-Formylmethionyl-tRNA
C03402  L-Asparaginyl-tRNA(Asn)
C03511  L-Phenylalanyl-tRNA(Phe)
C03512  L-Tryptophanyl-tRNA(Trp)
C06112  L-Glutamyl-tRNA(Gln)
C06113  L-Aspartyl-tRNA(Asn)
C06481  L-Seryl-tRNA(Sec)
C06482  L-Selenocysteinyl-tRNA(Sec)
C16138  L-Pyrrolysine
C16638  O-Phosphoseryl-tRNA(Sec)
C17022  O-Phosphoseryl-tRNA(Cys)
C17027  L-Pyrrolysyl-tRNA(Pyl)
Reference
  Authors
Sheppard K, Yuan J, Hohn MJ, Jester B, Devine KM, Soll D
  Title
From one amino acid to another: tRNA-dependent amino acid biosynthesis.
  Journal
Nucleic Acids Res 36:1813-25 (2008)
DOI:10.1093/nar/gkn015
Reference
  Authors
Polycarpo C, Ambrogelly A, Berube A, Winbush SM, McCloskey JA, Crain PF, Wood JL, Soll D
  Title
An aminoacyl-tRNA synthetase that specifically activates pyrrolysine.
  Journal
Proc Natl Acad Sci U S A 101:12450-4 (2004)
DOI:10.1073/pnas.0405362101
KO pathway
ko00970   

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