KEGG   PATHWAY: hps00970
Entry
hps00970                    Pathway                                
Name
Aminoacyl-tRNA biosynthesis - Helicobacter pylori Shi470
Class
Genetic Information Processing; Translation
Pathway map
hps00970  Aminoacyl-tRNA biosynthesis
hps00970

Organism
Helicobacter pylori Shi470 [GN:hps]
Gene
HPSH_t08334  tRNA-Ala [KO:K14218]
HPSH_t08298  tRNA-Ala [KO:K14218]
HPSH_t08300  tRNA-Arg [KO:K14219]
HPSH_t08324  tRNA-Arg [KO:K14219]
HPSH_t08322  tRNA-Arg [KO:K14219]
HPSH_t08306  tRNA-Arg [KO:K14219]
HPSH_t08296  tRNA-Asn [KO:K14220]
HPSH_t08284  tRNA-Asp [KO:K14221]
HPSH_t08318  tRNA-Cys [KO:K14222]
HPSH_t08312  tRNA-Gln [KO:K14223]
HPSH_t08282  tRNA-Glu [KO:K14224]
HPSH_t08288  tRNA-Glu [KO:K14224]
HPSH_t08314  tRNA-Gly [KO:K14225]
HPSH_t08342  tRNA-Gly [KO:K14225]
HPSH_t08326  tRNA-His [KO:K14226]
HPSH_t08332  tRNA-Ile [KO:K14227]
HPSH_t08316  tRNA-Leu [KO:K14228]
HPSH_t08330  tRNA-Leu [KO:K14228]
HPSH_t08348  tRNA-Leu [KO:K14228]
HPSH_t08350  tRNA-Leu [KO:K14228]
HPSH_t08290  tRNA-Lys [KO:K14229]
HPSH_t08310  tRNA-Met [KO:K14230]
HPSH_t08308  tRNA-Met [KO:K14230]
HPSH_t08336  tRNA-Met [KO:K14230]
HPSH_t08352  tRNA-Phe [KO:K14231]
HPSH_t08328  tRNA-Pro [KO:K14232]
HPSH_t08304  tRNA-Pro [KO:K14232]
HPSH_t08294  tRNA-Ser [KO:K14233]
HPSH_t08302  tRNA-Ser [KO:K14233]
HPSH_t08320  tRNA-Ser [KO:K14233]
HPSH_t08346  tRNA-Thr [KO:K14234]
HPSH_t08340  tRNA-Thr [KO:K14234]
HPSH_t08338  tRNA-Trp [KO:K14235]
HPSH_t08344  tRNA-Tyr [KO:K14236]
HPSH_t08286  tRNA-Val [KO:K14237]
HPSH_t08292  tRNA-Val [KO:K14237]
HPSH_02345  gltX; glutamyl-tRNA synthetase [KO:K01885] [EC:6.1.1.17]
HPSH_03645  glutamyl-tRNA synthetase [KO:K09698] [EC:6.1.1.24]
HPSH_02650  gatA; aspartyl/glutamyl-tRNA amidotransferase subunit A [KO:K02433] [EC:6.3.5.6 6.3.5.7]
HPSH_03565  gatB; aspartyl/glutamyl-tRNA amidotransferase subunit B [KO:K02434] [EC:6.3.5.6 6.3.5.7]
HPSH_05150  gatC; aspartyl/glutamyl-tRNA amidotransferase subunit C [KO:K02435] [EC:6.3.5.6 6.3.5.7]
HPSH_06420  alaS; alanyl-tRNA synthetase [KO:K01872] [EC:6.1.1.7]
HPSH_03785  aspS; aspartyl-tRNA synthetase [KO:K01876] [EC:6.1.1.12]
HPSH_05060  glyQ; glycyl-tRNA synthetase subunit alpha [KO:K01878] [EC:6.1.1.14]
HPSH_05135  glyS; glycyl-tRNA synthetase subunit beta [KO:K01879] [EC:6.1.1.14]
HPSH_00615  thrS; threonyl-tRNA synthetase [KO:K01868] [EC:6.1.1.3]
HPSH_07585  seryl-tRNA synthetase [KO:K01875] [EC:6.1.1.11]
HPSH_07770  selenocysteine synthase [KO:K01042] [EC:2.9.1.1]
HPSH_04670  cysS; cysteinyl-tRNA synthetase [KO:K01883] [EC:6.1.1.16]
HPSH_05325  methionyl-tRNA synthetase [KO:K01874] [EC:6.1.1.10]
HPSH_05875  fmt; methionyl-tRNA formyltransferase [KO:K00604] [EC:2.1.2.9]
HPSH_05950  valS; valyl-tRNA synthetase [KO:K01873] [EC:6.1.1.9]
HPSH_08050  leuS; leucyl-tRNA synthetase [KO:K01869] [EC:6.1.1.4]
HPSH_07255  ileS; isoleucyl-tRNA synthetase [KO:K01870] [EC:6.1.1.5]
HPSH_00925  lysS; lysyl-tRNA synthetase [KO:K04567] [EC:6.1.1.6]
HPSH_01650  argS; arginyl-tRNA synthetase [KO:K01887] [EC:6.1.1.19]
HPSH_01240  prolyl-tRNA synthetase [KO:K01881] [EC:6.1.1.15]
HPSH_06160  hisS; histidyl-tRNA synthetase [KO:K01892] [EC:6.1.1.21]
HPSH_05390  pheS; phenylalanyl-tRNA synthetase subunit alpha [KO:K01889] [EC:6.1.1.20]
HPSH_05395  pheT; phenylalanyl-tRNA synthetase subunit beta [KO:K01890] [EC:6.1.1.20]
HPSH_02940  tyrosyl-tRNA synthetase [KO:K01866] [EC:6.1.1.1]
HPSH_06495  tryptophanyl-tRNA synthetase [KO:K01867] [EC:6.1.1.2]
Compound
C00025  L-Glutamate
C00037  Glycine
C00041  L-Alanine
C00047  L-Lysine
C00049  L-Aspartate
C00062  L-Arginine
C00064  L-Glutamine
C00065  L-Serine
C00073  L-Methionine
C00078  L-Tryptophan
C00079  L-Phenylalanine
C00082  L-Tyrosine
C00097  L-Cysteine
C00101  Tetrahydrofolate
C00123  L-Leucine
C00135  L-Histidine
C00148  L-Proline
C00152  L-Asparagine
C00183  L-Valine
C00188  L-Threonine
C00234  10-Formyltetrahydrofolate
C00407  L-Isoleucine
C00886  L-Alanyl-tRNA
C01005  O-Phospho-L-serine
C01931  L-Lysyl-tRNA
C02047  L-Leucyl-tRNA
C02163  L-Arginyl-tRNA(Arg)
C02282  Glutaminyl-tRNA
C02412  Glycyl-tRNA(Gly)
C02430  L-Methionyl-tRNA
C02553  L-Seryl-tRNA(Ser)
C02554  L-Valyl-tRNA(Val)
C02702  L-Prolyl-tRNA(Pro)
C02839  L-Tyrosyl-tRNA(Tyr)
C02984  L-Aspartyl-tRNA(Asp)
C02987  L-Glutamyl-tRNA(Glu)
C02988  L-Histidyl-tRNA(His)
C02992  L-Threonyl-tRNA(Thr)
C03125  L-Cysteinyl-tRNA(Cys)
C03127  L-Isoleucyl-tRNA(Ile)
C03294  N-Formylmethionyl-tRNA
C03402  L-Asparaginyl-tRNA(Asn)
C03511  L-Phenylalanyl-tRNA(Phe)
C03512  L-Tryptophanyl-tRNA(Trp)
C06112  L-Glutamyl-tRNA(Gln)
C06113  L-Aspartyl-tRNA(Asn)
C06481  L-Seryl-tRNA(Sec)
C06482  L-Selenocysteinyl-tRNA(Sec)
C16138  L-Pyrrolysine
C16638  O-Phosphoseryl-tRNA(Sec)
C17022  O-Phosphoseryl-tRNA(Cys)
C17027  L-Pyrrolysyl-tRNA(Pyl)
Reference
  Authors
Sheppard K, Yuan J, Hohn MJ, Jester B, Devine KM, Soll D
  Title
From one amino acid to another: tRNA-dependent amino acid biosynthesis.
  Journal
Nucleic Acids Res 36:1813-25 (2008)
DOI:10.1093/nar/gkn015
Reference
  Authors
Polycarpo C, Ambrogelly A, Berube A, Winbush SM, McCloskey JA, Crain PF, Wood JL, Soll D
  Title
An aminoacyl-tRNA synthetase that specifically activates pyrrolysine.
  Journal
Proc Natl Acad Sci U S A 101:12450-4 (2004)
DOI:10.1073/pnas.0405362101
Related
pathway
hps00250  Alanine, aspartate and glutamate metabolism
hps00260  Glycine, serine and threonine metabolism
hps00270  Cysteine and methionine metabolism
hps00290  Valine, leucine and isoleucine biosynthesis
hps00300  Lysine biosynthesis
hps00330  Arginine and proline metabolism
hps00380  Tryptophan metabolism
hps00400  Phenylalanine, tyrosine and tryptophan biosynthesis
KO pathway
ko00970   

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