KEGG   PATHWAY: ko03440Help
Entry
ko03440                     Pathway                                

Name
Homologous recombination
Description
Homologous recombination (HR) is essential for the accurate repair of DNA double-strand breaks (DSBs), potentially lethal lesions. HR takes place in the late S-G2 phase of the cell cycle and involves the generation of a single-stranded region of DNA, followed by strand invasion, formation of a Holliday junction, DNA synthesis using the intact strand as a template, branch migration and resolution. It is investigated that RecA/Rad51 family proteins play a central role. The breast cancer susceptibility protein Brca2 and the RecQ helicase BLM (Bloom syndrome mutated) are tumor suppressors that maintain genome integrity, at least in part, through HR.
Class
Genetic Information Processing; Replication and repair
BRITE hierarchy
Pathway map
Homologous recombination
ko03440

All organismsOrtholog table
Module
M00260  
DNA polymerase III complex, bacteria [PATH:ko03440]
M00288  
RPA complex [PATH:ko03440]
M00291  
MRN complex [PATH:ko03440]
M00292  
MRX complex [PATH:ko03440]
M00295  
BRCA1-associated genome surveillance complex (BASC) [PATH:ko03440]
Disease
H00094  
DNA repair defects
H00296  
Defects in RecQ helicases
H00848  
Ataxia with ocular apraxia (AOA)
H01287  
Congenital mirror movements (CMM)
Other DBs
BSID: 
GO: 
Orthology
K07462  
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K03111  
single-strand DNA-binding protein
K03629  
DNA replication and repair protein RecF
K03584  
DNA repair protein RecO (recombination protein O)
K06187  
recombination protein RecR
K03553  
recombination protein RecA
K02335  
DNA polymerase I [EC:2.7.7.7]
K03550  
holliday junction DNA helicase RuvA [EC:3.6.4.12]
K03551  
holliday junction DNA helicase RuvB [EC:3.6.4.12]
K01159  
crossover junction endodeoxyribonuclease RuvC [EC:3.1.22.4]
K03655  
ATP-dependent DNA helicase RecG [EC:3.6.4.12]
K03582  
exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
K03583  
exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
K03581  
exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
K02337  
DNA polymerase III subunit alpha [EC:2.7.7.7]
K03763  
DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
K02338  
DNA polymerase III subunit beta [EC:2.7.7.7]
K02343  
DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K02340  
DNA polymerase III subunit delta [EC:2.7.7.7]
K02341  
DNA polymerase III subunit delta' [EC:2.7.7.7]
K02342  
DNA polymerase III subunit epsilon [EC:2.7.7.7]
K14159  
ribonuclease HI / DNA polymerase III subunit epsilon [EC:2.7.7.7 3.1.26.4]
K02345  
DNA polymerase III subunit theta [EC:2.7.7.7]
K02339  
DNA polymerase III subunit chi [EC:2.7.7.7]
K02344  
DNA polymerase III subunit psi [EC:2.7.7.7]
K04066  
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:3.6.4.-]
K02686  
primosomal replication protein N
K04067  
primosomal replication protein N''
K02317  
DNA replication protein DnaT
K10866  
DNA repair protein RAD50 [EC:3.6.-.-]
K10865  
double-strand break repair protein MRE11
K10868  
DNA repair protein XRS2
K10867  
nijmegen breakage syndrome protein 1
K10957  
DNA repair protein RAD55
K10958  
DNA repair protein RAD57
K07466  
replication factor A1
K10739  
replication factor A2
K10740  
replication factor A3
K10741  
replication factor A4
K04482  
DNA repair protein RAD51
K10873  
DNA repair and recombination protein RAD52
K08775  
breast cancer 2 susceptibility protein
K10881  
26 proteasome complex subunit DSS1
K10869  
RAD51-like protein 1
K10870  
RAD51-like protein 2
K10871  
RAD51-like protein 3
K10879  
DNA-repair protein XRCC2
K10880  
DNA-repair protein XRCC3
K10959  
DNA repair protein RAD59
K10875  
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:3.6.4.-]
K10877  
DNA repair and recombination protein RAD54B [EC:3.6.4.-]
K02327  
DNA polymerase delta subunit 1 [EC:2.7.7.7]
K02328  
DNA polymerase delta subunit 2
K03504  
DNA polymerase delta subunit 3
K03505  
DNA polymerase delta subunit 4
K10901  
bloom syndrome protein [EC:3.6.4.12]
K03165  
DNA topoisomerase III [EC:5.99.1.2]
K08991  
crossover junction endonuclease MUS81 [EC:3.1.22.-]
K10882  
crossover junction endonuclease EME1 [EC:3.1.22.-]
Reference
  Authors
Maloisel L, Fabre F, Gangloff S.
  Title
DNA polymerase delta is preferentially recruited during homologous recombination to promote heteroduplex DNA extension.
  Journal
Mol Cell Biol 28:1373-82 (2008)
Reference
  Authors
Haruta-Takahashi N, Iwasaki H.
  Title
[Recombination mediators] Japanese
  Journal
Seikagaku 79:449-53 (2007)
Reference
  Authors
Ouyang KJ, Woo LL, Ellis NA.
  Title
Homologous recombination and maintenance of genome integrity: Cancer and aging through the prism of human RecQ helicases.
  Journal
Mech Ageing Dev 129:425-40 (2008)
Reference
  Authors
Kawabata M, Kawabata T, Nishibori M.
  Title
Role of recA/RAD51 family proteins in mammals.
  Journal
Acta Med Okayama 59:1-9 (2005)
Reference
  Authors
Prado F, Cortes-Ledesma F, Huertas P, Aguilera A.
  Title
Mitotic recombination in Saccharomyces cerevisiae.
  Journal
Curr Genet 42:185-98 (2003)
Reference
  Authors
Heyer WD, Li X, Rolfsmeier M, Zhang XP.
  Title
Rad54: the Swiss Army knife of homologous recombination?
  Journal
Nucleic Acids Res 34:4115-25 (2006)
Reference
  Authors
Michel B, Boubakri H, Baharoglu Z, LeMasson M, Lestini R.
  Title
Recombination proteins and rescue of arrested replication forks.
  Journal
DNA Repair (Amst) 6:967-80 (2007)
Reference
  Authors
Hanaoka F.
  Title
[DNA Replication and Repair] (In Japanese)
  Journal
Yodosha (2004)
Reference
  Authors
Ohashi E, Ohmori H.
  Title
[The cross talk of the DNA replication and repair in Escherichia coli.] ( In Japanese)
  Journal
Cell Technology 19:1449-53 (2000)

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