KEGG   PATHWAY: ko05340Help
Entry
ko05340                     Pathway                                

Name
Primary immunodeficiency
Description
Primary immunodeficiencies (PIs) are a heterogeneous group of disorders, which affect cellular and humoral immunity or non-specific host defense mechanisms mediated by complement proteins, and cells such as phagocytes and natural killer (NK) cells. These disorders of the immune system cause increased susceptibility to infection, autoimmune disease, and malignancy. Most of PIs are due to genetic defects that affect cell maturation or function at different levels during hematopoiesis. Disruption of the cellular immunity is observed in patients with defects in T cells or both T and B cells. These cellular immunodeficiencies comprise 20% of all PIs. Disorders of humoral immunity affect B-cell differentiation and antibody production. They account for 70% of all PIs.
Class
Human Diseases; Immune diseases
BRITE hierarchy
Pathway map
Primary immunodeficiency
ko05340

All organismsOrtholog table
Disease
H00085  
Agammaglobulinemias
H00086  
Hyper IgM syndromes, autosomal recessive type
H00088  
Common variable immunodeficiency (CVID)
H00091  
T-B+Severe combined immunodeficiencies (SCIDs)
H00092  
T-B-Severe combined immunodeficiencies (SCIDs)
H00093  
Combined immunodeficiencies (CIDs)
H00095  
Ectodermal dysplasia associated immunodeficiency (EDA-ID)
H00107  
Other well-defined immunodeficiency syndromes
H00984  
Bare lymphocyte syndrome (BLS) type1
H00985  
Bare lymphocyte syndrome (BLS) type2
Orthology
K01488  
adenosine deaminase [EC:3.5.4.4]
K05072  
interleukin 7 receptor
K05070  
interleukin 2 receptor gamma
K10887  
DNA cross-link repair 1C protein [EC:3.1.-.-]
K10628  
V(D)J recombination-activating protein 1 [EC:6.3.2.19]
K10988  
recombination-activating protein 2
K06450  
T-cell surface glycoprotein CD3 delta chain
K06451  
T-cell surface glycoprotein CD3 epsilon chain
K06478  
receptor-type tyrosine-protein phosphatase C [EC:3.1.3.48]
K06454  
CD4 antigen
K06458  
CD8A antigen, alpha polypeptide
K06459  
CD8B antigen, beta polypeptide
K10603  
autoimmune regulator
K05653  
ATP-binding cassette, subfamily B (MDR/TAP), member 2
K05654  
ATP-binding cassette, subfamily B (MDR/TAP), member 3
K05856  
lymphocyte cell-specific protein tyrosine kinase [EC:2.7.10.2]
K07360  
tyrosine-protein kinase ZAP-70 [EC:2.7.10.2]
K08061  
regulatory factor X 5
K08063  
regulatory factor X-associated protein
K08062  
regulatory factor X-associated ankyrin-containing protein
K08060  
class II, major histocompatibility complex, transactivator
K16056  
calcium release-activated calcium channel protein 1
K06856  
immunoglobulin heavy chain
K06506  
CD79A antigen
K07371  
B-cell linker protein
K07370  
Bruton agammaglobulinemia tyrosine kinase [EC:2.7.10.2]
K07210  
inhibitor of nuclear factor kappa-B kinase subunit gamma
K03160  
tumor necrosis factor receptor superfamily member 5
K03161  
tumor necrosis factor ligand superfamily member 5
K03648  
uracil-DNA glycosylase [EC:3.2.2.27]
K10989  
activation-induced cytidine deaminase [EC:3.5.4.5]
K06713  
inducible T-cell co-stimulator
K05151  
tumor necrosis factor receptor superfamily member 13C
K06465  
CD19 antigen
K05150  
tumor necrosis factor receptor superfamily member 13B
Reference
  Authors
Cunningham-Rundles C, Ponda PP.
  Title
Molecular defects in T- and B-cell primary immunodeficiency diseases.
  Journal
Nat Rev Immunol 5:880-92 (2005)
Reference
  Authors
Ballow M.
  Title
Primary immunodeficiency disorders: antibody deficiency.
  Journal
J Allergy Clin Immunol 109:581-91 (2002)
Reference
  Authors
Marodi L, Notarangelo LD.
  Title
Immunological and genetic bases of new primary immunodeficiencies.
  Journal
Nat Rev Immunol 7:851-61 (2007)
Reference
  Authors
Geha RS, Notarangelo LD, Casanova JL, Chapel H, Conley ME, Fischer A, Hammarstrom L, Nonoyama S, Ochs HD, Puck JM, Roifman C, Seger R, Wedgwood J.
  Title
Primary immunodeficiency diseases: an update from the International Union of Immunological Societies Primary Immunodeficiency Diseases Classification Committee.
  Journal
J Allergy Clin Immunol 120:776-94 (2007)
Reference
  Authors
Fischer A.
  Title
Human primary immunodeficiency diseases.
  Journal
Immunity 27:835-45 (2007)
Reference
  Authors
Fischer A.
  Title
Human primary immunodeficiency diseases: a perspective.
  Journal
Nat Immunol 5:23-30 (2004)
Reference
  Authors
Buckley RH.
  Title
Primary immunodeficiency diseases due to defects in lymphocytes.
  Journal
N Engl J Med 343:1313-24 (2000)
Reference
  Authors
Fischer A, Le Deist F, Hacein-Bey-Abina S, Andre-Schmutz I, Basile Gde S, de Villartay JP, Cavazzana-Calvo M.
  Title
Severe combined immunodeficiency. A model disease for molecular immunology and therapy.
  Journal
Immunol Rev 203:98-109 (2005)
Reference
  Authors
de Villartay JP, Fischer A, Durandy A.
  Title
The mechanisms of immune diversification and their disorders.
  Journal
Nat Rev Immunol 3:962-72 (2003)

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