| Entry |
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| Name |
Flavonoid biosynthesis
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| Description |
Flavonoids are a major class of plant secondary metabolites that serves a multitude of functions including pigments and antioxidant activity. Flavonoids are synthesized from phenylpropanoid derivatives by condensation with malonyl-CoA. For example, condensation of p-coumaroyl-CoA (C6-C3) with three malonyl-CoA (C3) molecules results in naringenin chalcone with a diphenylpropane (C6-C3-C6) unit, which is converted to naringenin with the flavone (2-phenylchromen-4-one) backbone by conjugate ring closure. These and further modifications yield a variety of structural forms including chalcones, flavanones, dihyroflavonols, and flavans, anthocyanins, flavones and flavonols, and isoflavonoids.
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| Class |
Metabolism; Biosynthesis of other secondary metabolites
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| Pathway map |

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| Module |
| Flavonoid biosynthesis, 4-coumaroyl-CoA => naringenin => apigenin [PATH: map00941] | | Flavonoid biosynthesis, naringenin => pelargonidin [PATH: map00941] |
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| Other DBs |
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| Reference |
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| Authors |
Tsai CJ, Harding SA, Tschaplinski TJ, Lindroth RL, Yuan Y. |
| Title |
Genome-wide analysis of the structural genes regulating defense phenylpropanoid metabolism in Populus. |
| Journal |
New Phytol 172:47-62 (2006) |
| Reference |
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| Authors |
Ono E, Hatayama M, Isono Y, Sato T, Watanabe R, Yonekura-Sakakibara K, Fukuchi-Mizutani M, Tanaka Y, Kusumi T, Nishino T, Nakayama T. |
| Title |
Localization of a flavonoid biosynthetic polyphenol oxidase in vacuoles. |
| Journal |
Plant J 45:133-43 (2006) |
| Reference |
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| Authors |
Morreel K, Goeminne G, Storme V, Sterck L, Ralph J, Coppieters W, Breyne P, Steenackers M, Georges M, Messens E, Boerjan W. |
| Title |
Genetical metabolomics of flavonoid biosynthesis in Populus: a case study. |
| Journal |
Plant J 47:224-37 (2006) |
| Reference |
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| Authors |
Ono E, Fukuchi-Mizutani M, Nakamura N, Fukui Y, Yonekura-Sakakibara K, Yamaguchi M, Nakayama T, Tanaka T, Kusumi T, Tanaka Y. |
| Title |
Yellow flowers generated by expression of the aurone biosynthetic pathway. |
| Journal |
Proc Natl Acad Sci U S A 103:11075-80 (2006) |
| Reference |
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| Authors |
Halbwirth H, Martens S, Wienand U, Forkmann G, Stich K. |
| Title |
Synthesis of (14C)-labeled 5-deoxyflavonoids and their application in the study of dihydroflavonol/leucoanthocyanidin interconversion by dihydroflavonol 4-reductase. |
| Journal |
Plant Science 170(3): 587-595 (2006) |
| Reference |
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| Authors |
Stevens JF, Page JE. |
| Title |
Xanthohumol and related prenylflavonoids from hops and beer: to your good health! |
| Journal |
Phytochemistry 65:1317-30 (2004) |
| Reference |
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| Authors |
Ogata J, Itoh Y, Ishida M, Yoshida H, Ozeki Y. |
| Title |
Cloning and heterologous expression of cDNAs encoding flavonoid glucosyltransferases from Dianthus caryophyllus. |
| Journal |
Plant Biotechnology 21(5):367-375 (2004) |
| Reference |
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| Authors |
Springob K, Nakajima J, Yamazaki M, Saito K. |
| Title |
Recent advances in the biosynthesis and accumulation of anthocyanins. |
| Journal |
Nat Prod Rep 20:288-303 (2003) |
| Reference |
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| Authors |
Shimada N, Aoki T, Sato S, Nakamura Y, Tabata S, Ayabe S. |
| Title |
A cluster of genes encodes the two types of chalcone isomerase involved in the biosynthesis of general flavonoids and legume-specific 5-deoxy(iso)flavonoids in Lotus japonicus. |
| Journal |
Plant Physiol 131:941-51 (2003) |
| Reference |
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| Authors |
Halbwirth H, Martens S, Wienand U, Forkmann G, Stich K. |
| Title |
Biochemical formation of anthocyanins in silk tissue of Zea mays. |
| Journal |
Plant Science 164(4):489-495 (2003) |
| Reference |
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| Authors |
Martens S, Knott J, Seitz CA, Janvari L, Yu SN, Forkmann G. |
| Title |
Impact of biochemical pre-studies on specific metabolic engineering strategies of flavonoid biosynthesis in plant tissues. |
| Journal |
Biochemical Engineering Journal 14(3):227-235 (2003) |
| Reference |
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| Authors |
Nakayama T, Yonekura-Sakakibara K, Sato T, Kikuchi S, Fukui Y, Fukuchi-Mizutani M, Ueda T, Nakao M, Tanaka Y, Kusumi T, Nishino T. |
| Title |
Aureusidin synthase: a polyphenol oxidase homolog responsible for flower coloration. |
| Journal |
Science 290:1163-6 (2000) |
| Reference |
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| Authors |
Lewinsohn E, Britsch L, Mazur Y, Gressel J. |
| Title |
Flavanone Glycoside Biosynthesis in Citrus: Chalcone Synthase, UDP-Glucose:Flavanone-7-O-Glucosyl-Transferase and -Rhamnosyl-Transferase Activities in Cell-Free Extracts. |
| Journal |
Plant Physiol 91:1323-1328 (1989) |
| KO pathway |
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