KEGG   PATHWAY: ncy00630Help
Entry
ncy00630                    Pathway                                

Name
Glyoxylate and dicarboxylate metabolism - Nocardia cyriacigeorgica
Class
Metabolism; Carbohydrate metabolism
BRITE hierarchy
Pathway map
ncy00630  Glyoxylate and dicarboxylate metabolism
ncy00630

Ortholog table
Module
ncy_M00012  Glyoxylate cycle [PATH:ncy00630]
ncy_M00741  Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH:ncy00630]
Organism
Nocardia cyriacigeorgica [GN:ncy]
Gene
NOCYR_5051  aceA; isocitrate lyase [KO:K01637] [EC:4.1.3.1]
NOCYR_2577  glcB; Malate synthase G [KO:K01638] [EC:2.3.3.9]
NOCYR_3552  mdh; Malate dehydrogenase [KO:K00024] [EC:1.1.1.37]
NOCYR_3909  prpC; Citrate synthase [KO:K01647] [EC:2.3.3.1]
NOCYR_0665  citrate synthase 2 [KO:K01647] [EC:2.3.3.1]
NOCYR_0668  gltA; type II citrate synthase [KO:K01647] [EC:2.3.3.1]
NOCYR_2622  acnA; aconitate hydratase 1 [KO:K01681] [EC:4.2.1.3]
NOCYR_0265  fadA; beta-ketoadipyl CoA thiolase [KO:K00626] [EC:2.3.1.9]
NOCYR_0518  fadA; acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
NOCYR_0530  fadA; acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
NOCYR_0534  putative lipid carrier protein or keto acyl-CoA thiolase [KO:K00626] [EC:2.3.1.9]
NOCYR_2319  putative 3-ketoacyl-CoA thiolase 2, peroxisomal precursor (Beta-ketothiolase 2) (Acetyl-CoA acyltransferase 2) (Peroxisomal 3-oxoacyl-CoA thiolase 2) (Peroxisome defective protein 1) [KO:K00626] [EC:2.3.1.9]
NOCYR_2472  putative carnitinyl-CoA dehydratase (Crotonobetainyl-CoA hydratase) (modular protein) [KO:K00626] [EC:2.3.1.9]
NOCYR_2040  fadA; acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
NOCYR_1155  phbA; acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
NOCYR_4627  fadA; acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
NOCYR_5323  fadA; acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
NOCYR_1610  lipid carrier protein or keto acyl-CoA thiolase [KO:K00626] [EC:2.3.1.9]
NOCYR_1154  mce; Methylmalonyl-CoA epimerase [KO:K05606] [EC:5.1.99.1]
NOCYR_5174  accA1; acetyl/propionyl-CoA carboxylase alpha subunit [KO:K01965] [EC:6.4.1.3]
NOCYR_1057  pccB; Propionyl-CoA carboxylase beta subunit [KO:K01966] [EC:2.1.3.15 6.4.1.3]
NOCYR_1052  accC; acetyl-CoA carboxylase, biotin carboxylase subunit [KO:K11263] [EC:6.3.4.14 6.4.1.3 6.4.1.2]
NOCYR_4821  putative acetyl-CoA carboxylase alpha subunit [KO:K11263] [EC:6.3.4.14 6.4.1.3 6.4.1.2]
NOCYR_1673  pccB1; Propionyl-CoA carboxylase beta subunit [KO:K18472] [EC:2.1.3.15 6.4.1.3 6.4.1.2]
NOCYR_2640  mutA; methylmalonyl-CoA mutase beta subunit [KO:K01847] [EC:5.4.99.2]
NOCYR_2641  yliK; methylmalonyl-CoA mutase [KO:K01847] [EC:5.4.99.2]
NOCYR_1071  putative oxidoreductase [KO:K00104] [EC:1.1.3.15]
NOCYR_0300  katA; Catalase (monofunctional heme-containing catalase) [KO:K03781] [EC:1.11.1.6]
NOCYR_2216  katA2; catalase (monofunctional heme-containing catalase) [KO:K03781] [EC:1.11.1.6]
NOCYR_3203  Putative hydrolase [KO:K01091] [EC:3.1.3.18]
NOCYR_3243  cbbL; Ribulose bisphosphate carboxylase large chain 2 (RuBisCO large subunit 2) [KO:K01601] [EC:4.1.1.39]
NOCYR_3242  Ribulose bisphosphate carboxylase small chain (RuBisCO small subunit) [KO:K01602] [EC:4.1.1.39]
NOCYR_3021  glnA; Glutamate--ammonia ligase [KO:K01915] [EC:6.3.1.2]
NOCYR_1727  glnA; Glutamate--ammonia ligase [KO:K01915] [EC:6.3.1.2]
NOCYR_1738  glnA; glutamine synthetase [KO:K01915] [EC:6.3.1.2]
NOCYR_4589  glyA; Serine hydroxymethyltransferase (Serine methylase) (SHMT) [KO:K00600] [EC:2.1.2.1]
NOCYR_2568  gcvP; Glycine dehydrogenase [decarboxylating] (Glycine decarboxylase) (Glycine cleavage system P-protein) [KO:K00281] [EC:1.4.4.2]
NOCYR_1810  gcvT; Aminomethyltransferase (Glycine cleavage system T protein) [KO:K00605] [EC:2.1.2.10]
NOCYR_5082  lpd; dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
NOCYR_1031  Dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
NOCYR_4784  putative Mercuric reductase (Hg(II) reductase) [KO:K00382] [EC:1.8.1.4]
NOCYR_2563  gcvH; Glycine cleavage system H protein [KO:K02437]
NOCYR_5372  glxK; Glycerate kinase [KO:K00865] [EC:2.7.1.165]
NOCYR_3761  Tartrate dehydrogenase/decarboxylase (TDH) (D-malate dehydrogenase [decarboxylating]) [KO:K07246] [EC:1.1.1.83 4.1.1.73 1.1.1.93]
NOCYR_5008  purU; formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
Reference
PMID:10978349 (EC5.3.1.22)
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta -hydroxyacid dehydrogenases in Escherichia coli and Haemophilusinfluenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
KO pathway
ko00630   

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