KEGG   PATHWAY: ngr00510Help
Entry
ngr00510                    Pathway                                

Name
N-Glycan biosynthesis - Naegleria gruberi
Description
N-glycans or asparagine-linked glycans are major constituents of glycoproteins in eukaryotes. N-glycans are covalently attached to asparagine with the consensus sequence of Asn-X-Ser/Thr by an N-glycosidic bond, GlcNAc b1- Asn. Biosynthesis of N-glycans begins on the cytoplasmic face of the ER membrane with the transferase reaction of UDP-GlcNAc and the lipid-like precursor P-Dol (dolichol phosphate) to generate GlcNAc a1- PP-Dol. After sequential addition of monosaccharides by ALG glycosyltransferases [MD:M00055], the N-glycan precursor is attached by the OST (oligosaccharyltransferase) complex to the polypeptide chain that is being synthesized and translocated through the ER membrane. The protein-bound N-glycan precursor is subsequently trimmed, extended, and modified in the ER and Golgi by a complex series of reactions catalyzed by membrane-bound glycosidases and glycosyltransferases. N-glycans thus synthesized are classified into three types: high-mannose type, complex type, and hybrid type. Defects in N-glycan biosynthesis lead to a variety of human diseases known as congenital disorders of glycosylation [DS:H00118 H00119].
Class
Metabolism; Glycan biosynthesis and metabolism
BRITE hierarchy
Pathway map
N-Glycan biosynthesis
ngr00510

All organismsOrtholog table
Module
N-glycan precursor biosynthesis [PATH:ngr00510]
Oligosaccharyltransferase [PATH:ngr00510]
N-glycan precursor trimming [PATH:ngr00510]
N-glycan biosynthesis, high-mannose type [PATH:ngr00510]
N-glycan biosynthesis, complex type [PATH:ngr00510]
Other DBs
BSID: 
GO: 
Organism
Naegleria gruberi [GN:ngr]
Gene
hypothetical protein; K00902 dolichol kinase [EC:2.7.1.108] [KO:K00902] [EC:2.7.1.108]
hypothetical protein; K01001 UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase [EC:2.7.8.15] [KO:K01001] [EC:2.7.8.15]
hypothetical protein; K00729 dolichyl-phosphate beta-glucosyltransferase [EC:2.4.1.117] [KO:K00729] [EC:2.4.1.117]
hypothetical protein; K07432 beta-1,4-N-acetylglucosaminyltransferase [EC:2.4.1.141] [KO:K07432] [EC:2.4.1.141]
hypothetical protein; K07441 beta-1,4-N-acetylglucosaminyltransferase [EC:2.4.1.141] [KO:K07441] [EC:2.4.1.141]
hypothetical protein; K00721 dolichol-phosphate mannosyltransferase [EC:2.4.1.83] [KO:K00721] [EC:2.4.1.83]
hypothetical protein; K03842 beta-1,4-mannosyltransferase [EC:2.4.1.142] [KO:K03842] [EC:2.4.1.142]
hypothetical protein; K03843 alpha-1,3/alpha-1,6-mannosyltransferase [EC:2.4.1.132 2.4.1.257] [KO:K03843] [EC:2.4.1.257 2.4.1.132]
glycosyl transferase; K03844 alpha-1,2-mannosyltransferase [EC:2.4.1.131] [KO:K03844] [EC:2.4.1.131]
hypothetical protein; K06316 oligosaccharidyl-lipid flippase family [KO:K06316]
glycosyltransferase; K03846 alpha-1,2-mannosyltransferase [EC:2.4.1.259 2.4.1.261] [KO:K03846] [EC:2.4.1.261 2.4.1.259]
hypothetical protein; K03847 alpha-1,6-mannosyltransferase [EC:2.4.1.260] [KO:K03847] [EC:2.4.1.260]
dolichyl pyrophosphate Man9GlcNAc2 alpha-1; K03848 alpha-1,3-glucosyltransferase [EC:2.4.1.267] [KO:K03848] [EC:2.4.1.267]
hypothetical protein; K03849 alpha-1,3-glucosyltransferase [EC:2.4.1.265] [KO:K03849] [EC:2.4.1.265]
alpha-2-glucosyltransferase; K03850 alpha-1,2-glucosyltransferase [EC:2.4.1.256] [KO:K03850] [EC:2.4.1.256]
hypothetical protein; K07151 dolichyl-diphosphooligosaccharide--protein glycosyltransferase [EC:2.4.99.18] [KO:K07151] [EC:2.4.99.18]
ribophorin I; K12666 oligosaccharyltransferase complex subunit alpha (ribophorin I) [KO:K12666]
dolichyl-diphosphooligosaccharide protein glycosyltransferase; K12667 oligosaccharyltransferase complex subunit delta (ribophorin II) [KO:K12667]
hypothetical protein; K12668 oligosaccharyltransferase complex subunit epsilon [KO:K12668]
dolichyl-diphosphooligosaccharide-protein glycosyltransferase; K12670 oligosaccharyltransferase complex subunit beta [KO:K12670]
glycosyl hydrolase family protein; K01228 mannosyl-oligosaccharide glucosidase [EC:3.2.1.106] [KO:K01228] [EC:3.2.1.106]
hypothetical protein; K05546 alpha 1,3-glucosidase [EC:3.2.1.84] [KO:K05546] [EC:3.2.1.84]
hypothetical protein; K01230 mannosyl-oligosaccharide alpha-1,2-mannosidase [EC:3.2.1.113] [KO:K01230] [EC:3.2.1.113]
alpha 1; K01230 mannosyl-oligosaccharide alpha-1,2-mannosidase [EC:3.2.1.113] [KO:K01230] [EC:3.2.1.113]
hypothetical protein; K01230 mannosyl-oligosaccharide alpha-1,2-mannosidase [EC:3.2.1.113] [KO:K01230] [EC:3.2.1.113]
N-acetylglucosaminylaminotransferase; K00726 alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase [EC:2.4.1.101] [KO:K00726] [EC:2.4.1.101]
alpha-mannosidase; K01231 alpha-mannosidase II [EC:3.2.1.114] [KO:K01231] [EC:3.2.1.114]
Compound
C00096  
GDP-mannose
C00110  
Dolichyl phosphate
C00381  
Dolichol
C00621  
Dolichyl diphosphate
C01246  
Dolichyl beta-D-glucosyl phosphate
C03021  
Protein asparagine
C03862  
Dolichyl phosphate D-mannose
G00001  
N-Acetyl-D-glucosaminyldiphosphodolichol
G00002  
N,N'-Chitobiosyldiphosphodolichol
G00003  
 
G00004  
 
G00005  
 
G00006  
 
G00007  
 
G00008  
 
G00009  
 
G00010  
 
G00011  
 
G00012  
 
G00013  
 
G00014  
 
G00015  
 
G00016  
 
G00017  
 
G00018  
DS 3
G00019  
 
G00020  
 
G00021  
 
G00022  
 
G00171  
 
G10526  
 
G10595  
 
G10596  
 
G10597  
 
G10598  
 
G10599  
 
Reference
PMID:9111134
  Authors
Schutzbach JS.
  Title
The role of the lipid matrix in the biosynthesis of dolichyl-linked oligosaccharides.
  Journal
Glycoconj J 14:175-82 (1997)
Reference
  Authors
Oriol R, Martinez-Duncker I, Chantret I, Mollicone R, Codogno P.
  Title
Common origin and evolution of glycosyltransferases using Dol-P-monosaccharides as donor substrate.
  Journal
Mol Biol Evol 19:1451-63 (2002)
Reference
  Authors
Thiel C, Schwarz M, Peng J, Grzmil M, Hasilik M, Braulke T, Kohlschutter A, von Figura K, Lehle L, Korner C.
  Title
A new type of congenital disorders of glycosylation (CDG-Ii) provides new insights into the early steps of dolichol-linked oligosaccharide biosynthesis.
  Journal
J Biol Chem 278:22498-505 (2003)
Reference
  Authors
Cipollo JF, Trimble RB, Chi JH, Yan Q, Dean N.
  Title
The yeast ALG11 gene specifies addition of the terminal alpha 1,2-Man to the Man5GlcNAc2-PP-dolichol N-glycosylation intermediate formed on the cytosolic side of the endoplasmic reticulum.
  Journal
J Biol Chem 276:21828-40 (2001)
Reference
  Authors
Frank CG, Aebi M.
  Title
ALG9 mannosyltransferase is involved in two different steps of lipid-linked oligosaccharide biosynthesis.
  Journal
Glycobiology 15:1156-63 (2005)
Reference
  Authors
O'Reilly MK, Zhang G, Imperiali B.
  Title
In vitro evidence for the dual function of Alg2 and Alg11: essential mannosyltransferases in N-linked glycoprotein biosynthesis.
  Journal
Biochemistry 45:9593-603 (2006)
KO pathway
 

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