| Entry |
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| Name |
N-Glycan biosynthesis - Naegleria gruberi
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| Description |
N-glycans or asparagine-linked glycans are major constituents of glycoproteins in eukaryotes. N-glycans are covalently attached to asparagine with the consensus sequence of Asn-X-Ser/Thr by an N-glycosidic bond, GlcNAc b1- Asn. Biosynthesis of N-glycans begins on the cytoplasmic face of the ER membrane with the transferase reaction of UDP-GlcNAc and the lipid-like precursor P-Dol (dolichol phosphate) to generate GlcNAc a1- PP-Dol. After sequential addition of monosaccharides by ALG glycosyltransferases [MD: M00055], the N-glycan precursor is attached by the OST (oligosaccharyltransferase) complex to the polypeptide chain that is being synthesized and translocated through the ER membrane. The protein-bound N-glycan precursor is subsequently trimmed, extended, and modified in the ER and Golgi by a complex series of reactions catalyzed by membrane-bound glycosidases and glycosyltransferases. N-glycans thus synthesized are classified into three types: high-mannose type, complex type, and hybrid type. Defects in N-glycan biosynthesis lead to a variety of human diseases known as congenital disorders of glycosylation [DS: H00118 H00119].
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| Class |
Metabolism; Glycan biosynthesis and metabolism
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| Pathway map |

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| Module |
| N-glycan precursor biosynthesis [PATH: ngr00510] | | Oligosaccharyltransferase [PATH: ngr00510] | | N-glycan precursor trimming [PATH: ngr00510] | | N-glycan biosynthesis, high-mannose type [PATH: ngr00510] | | N-glycan biosynthesis, complex type [PATH: ngr00510] |
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| Other DBs |
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| Organism |
Naegleria gruberi [GN: ngr]
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| Gene |
| | | hypothetical protein; K01001 UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase [EC: 2.7.8.15] [KO: K01001] [EC: 2.7.8.15] | | | | | | | | | | | | | | | | hypothetical protein; K06316 oligosaccharidyl-lipid flippase family [KO: K06316] | | | | | | dolichyl pyrophosphate Man9GlcNAc2 alpha-1; K03848 alpha-1,3-glucosyltransferase [EC: 2.4.1.267] [KO: K03848] [EC: 2.4.1.267] | | | | | | hypothetical protein; K07151 dolichyl-diphosphooligosaccharide--protein glycosyltransferase [EC: 2.4.99.18] [KO: K07151] [EC: 2.4.99.18] | | ribophorin I; K12666 oligosaccharyltransferase complex subunit alpha (ribophorin I) [KO: K12666] | | dolichyl-diphosphooligosaccharide protein glycosyltransferase; K12667 oligosaccharyltransferase complex subunit delta (ribophorin II) [KO: K12667] | | hypothetical protein; K12668 oligosaccharyltransferase complex subunit epsilon [KO: K12668] | | dolichyl-diphosphooligosaccharide-protein glycosyltransferase; K12670 oligosaccharyltransferase complex subunit beta [KO: K12670] | | glycosyl hydrolase family protein; K01228 mannosyl-oligosaccharide glucosidase [EC: 3.2.1.106] [KO: K01228] [EC: 3.2.1.106] | | | | | | | | | | N-acetylglucosaminylaminotransferase; K00726 alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase [EC: 2.4.1.101] [KO: K00726] [EC: 2.4.1.101] | | |
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| Compound |
| GDP-mannose | | Dolichyl phosphate | | Dolichol | | Dolichyl diphosphate | | Dolichyl beta-D-glucosyl phosphate | | Protein asparagine | | Dolichyl phosphate D-mannose | | N-Acetyl-D-glucosaminyldiphosphodolichol | | N,N'-Chitobiosyldiphosphodolichol | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | DS 3 | | | | | | | | | | | | | | | | | | | | | | |
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| Reference |
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| Authors |
Schutzbach JS. |
| Title |
The role of the lipid matrix in the biosynthesis of dolichyl-linked oligosaccharides. |
| Journal |
Glycoconj J 14:175-82 (1997) |
| Reference |
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| Authors |
Oriol R, Martinez-Duncker I, Chantret I, Mollicone R, Codogno P. |
| Title |
Common origin and evolution of glycosyltransferases using Dol-P-monosaccharides as donor substrate. |
| Journal |
Mol Biol Evol 19:1451-63 (2002) |
| Reference |
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| Authors |
Thiel C, Schwarz M, Peng J, Grzmil M, Hasilik M, Braulke T, Kohlschutter A, von Figura K, Lehle L, Korner C. |
| Title |
A new type of congenital disorders of glycosylation (CDG-Ii) provides new insights into the early steps of dolichol-linked oligosaccharide biosynthesis. |
| Journal |
J Biol Chem 278:22498-505 (2003) |
| Reference |
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| Authors |
Cipollo JF, Trimble RB, Chi JH, Yan Q, Dean N. |
| Title |
The yeast ALG11 gene specifies addition of the terminal alpha 1,2-Man to the Man5GlcNAc2-PP-dolichol N-glycosylation intermediate formed on the cytosolic side of the endoplasmic reticulum. |
| Journal |
J Biol Chem 276:21828-40 (2001) |
| Reference |
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| Authors |
Frank CG, Aebi M. |
| Title |
ALG9 mannosyltransferase is involved in two different steps of lipid-linked oligosaccharide biosynthesis. |
| Journal |
Glycobiology 15:1156-63 (2005) |
| Reference |
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| Authors |
O'Reilly MK, Zhang G, Imperiali B. |
| Title |
In vitro evidence for the dual function of Alg2 and Alg11: essential mannosyltransferases in N-linked glycoprotein biosynthesis. |
| Journal |
Biochemistry 45:9593-603 (2006) |
| KO pathway |
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