KEGG   PATHWAY: nmg00630Help
Entry
nmg00630                    Pathway                                

Name
Glyoxylate and dicarboxylate metabolism - Natrialba magadii
Class
Metabolism; Carbohydrate metabolism
BRITE hierarchy
Pathway map
nmg00630  Glyoxylate and dicarboxylate metabolism
nmg00630

Ortholog table
Module
nmg_M00012  Glyoxylate cycle [PATH:nmg00630]
nmg_M00740  Methylaspartate cycle [PATH:nmg00630]
nmg_M00741  Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH:nmg00630]
Organism
Natrialba magadii [GN:nmg]
Gene
Nmag_3362  isocitrate lyase and phosphorylmutase [KO:K01637] [EC:4.1.3.1]
Nmag_1974  Lactate/malate dehydrogenase [KO:K00024] [EC:1.1.1.37]
Nmag_1476  2-methylcitrate synthase/citrate synthase II [KO:K01647] [EC:2.3.3.1]
Nmag_2423  Citrate (Si)-synthase [KO:K01647] [EC:2.3.3.1]
Nmag_1336  aconitate hydratase [KO:K01681] [EC:4.2.1.3]
Nmag_2989  aconitate hydratase 1 [KO:K01681] [EC:4.2.1.3]
Nmag_4020  Propanoyl-CoA C-acyltransferase [KO:K00626] [EC:2.3.1.9]
Nmag_0596  Propanoyl-CoA C-acyltransferase [KO:K00626] [EC:2.3.1.9]
Nmag_3319  Propanoyl-CoA C-acyltransferase [KO:K00626] [EC:2.3.1.9]
Nmag_2477  3-ketoacyl-CoA thiolase [KO:K00626] [EC:2.3.1.9]
Nmag_3409  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
Nmag_0555  methylmalonyl-CoA epimerase [KO:K05606] [EC:5.1.99.1]
Nmag_3337  MaoC domain protein dehydratase [KO:K14449] [EC:4.2.1.148]
Nmag_3094  Carbamoyl-phosphate synthase L chain ATP-binding protein [KO:K11263] [EC:6.3.4.14 6.4.1.3 6.4.1.2]
Nmag_2123  Carbamoyl-phosphate synthase L chain ATP-binding protein [KO:K11263] [EC:6.3.4.14 6.4.1.3 6.4.1.2]
Nmag_3092  carboxyl transferase [KO:K19312] [EC:2.1.3.15 6.4.1.3 6.4.1.2]
Nmag_3093  conserved hypothetical protein [KO:K22568] [EC:6.4.1.3 6.4.1.2]
Nmag_2472  cobalamin B12-binding domain protein [KO:K01849] [EC:5.4.99.2]
Nmag_0558  methylmalonyl-CoA mutase, large subunit [KO:K01848] [EC:5.4.99.2]
Nmag_0817  methylmalonyl-CoA mutase, large subunit [KO:K01848] [EC:5.4.99.2]
Nmag_3335  methylaspartate mutase, E subunit [KO:K19268] [EC:5.4.99.1]
Nmag_3334  methylaspartate mutase, S subunit [KO:K01846] [EC:5.4.99.1]
Nmag_3336  methylaspartate ammonia-lyase [KO:K04835] [EC:4.3.1.2]
Nmag_3333  L-carnitine dehydratase/bile acid-inducible protein F [KO:K19280] [EC:2.8.3.-]
Nmag_3338  HpcH/HpaI aldolase [KO:K19281] [EC:4.1.3.24]
Nmag_3363  HpcH/HpaI aldolase [KO:K19282] [EC:3.1.2.30 4.1.3.24]
Nmag_3391  Catalase [KO:K03781] [EC:1.11.1.6]
Nmag_1216  Haloacid dehalogenase domain protein hydrolase [KO:K01091] [EC:3.1.3.18]
Nmag_0707  HAD-superfamily hydrolase, subfamily IA, variant 1 [KO:K01091] [EC:3.1.3.18]
Nmag_0938  SPP-like hydrolase [KO:K22223] [EC:3.1.3.18]
Nmag_0732  ribulose bisphosphate carboxylase, type III [KO:K01601] [EC:4.1.1.39]
Nmag_0019  aminotransferase class V [KO:K00830] [EC:2.6.1.51 2.6.1.45 2.6.1.44]
Nmag_3850  Glutamate--ammonia ligase [KO:K01915] [EC:6.3.1.2]
Nmag_3857  Glutamate--ammonia ligase [KO:K01915] [EC:6.3.1.2]
Nmag_1459  glutamine synthetase, type I [KO:K01915] [EC:6.3.1.2]
Nmag_4121  Glutamate--ammonia ligase [KO:K01915] [EC:6.3.1.2]
Nmag_3382  glutamine synthetase, type I [KO:K01915] [EC:6.3.1.2]
Nmag_3305  Glycine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
Nmag_0397  Glycine dehydrogenase (decarboxylating) [KO:K00282] [EC:1.4.4.2]
Nmag_0396  aminotransferase class V [KO:K00283] [EC:1.4.4.2]
Nmag_1501  folate-binding protein YgfZ [KO:K00605] [EC:2.1.2.10]
Nmag_0716  glycine cleavage system T protein [KO:K00605] [EC:2.1.2.10]
Nmag_3630  FAD-dependent pyridine nucleotide-disulfide oxidoreductase [KO:K00382] [EC:1.8.1.4]
Nmag_1665  dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
Nmag_1804  FAD-dependent pyridine nucleotide-disulfide oxidoreductase [KO:K00382] [EC:1.8.1.4]
Nmag_0717  glycine cleavage system H protein [KO:K02437]
Nmag_0806  Hydroxypyruvate reductase [KO:K11529] [EC:2.7.1.165]
Nmag_1147  2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase [KO:K01625] [EC:4.1.3.42 4.1.2.14]
Nmag_2645  formyl transferase domain protein [KO:K01433] [EC:3.5.1.10]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
Reference
PMID:10978349 (EC5.3.1.22)
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta -hydroxyacid dehydrogenases in Escherichia coli and Haemophilusinfluenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
KO pathway
ko00630   

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