KEGG   PATHWAY: olu03050
Entry
olu03050                    Pathway                                
Name
Proteasome - Ostreococcus lucimarinus
Description
The proteasome is a protein-destroying apparatus involved in many essential cellular functions, such as regulation of cell cycle, cell differentiation, signal transduction pathways, antigen processing for appropriate immune responses, stress signaling, inflammatory responses, and apoptosis. It is capable of degrading a variety of cellular proteins in a rapid and timely fashion and most substrate proteins are modified by ubiquitin before their degradation by the proteasome. The proteasome is a large protein complex consisting of a proteolytic core called the 20S particle and ancillary factors that regulate its activity in various ways. The most common form is the 26S proteasome containing one 20S core particle and two 19S regulatory particles that enable the proteasome to degrade ubiquitinated proteins by an ATP-dependent mechanism. Another form is the immunoproteasome containing two 11S regulatory particles, PA28 alpha and PA28 beta, which are induced by interferon gamma under the conditions of intensified immune response. Other regulatory particles include PA28 gamma and PA200. Although PA28 gamma also belongs to a family of activators of the 20S proteasome, it is localized within the nucleus and forms a homoheptamer. PA28 gamma has been implicated in the regulation of cell cycle progression and apoptosis. PA200 has been identified as a large nuclear protein that stimulates proteasomal hydrolysis of peptides.
Class
Genetic Information Processing; Folding, sorting and degradation
Pathway map
olu03050  Proteasome
olu03050

Other DBs
GO: 0000502
Organism
Ostreococcus lucimarinus [GN:olu]
Gene
OSTLU_39898  predicted protein [KO:K03033]
OSTLU_27661  predicted protein [KO:K06693]
OSTLU_51525  predicted protein [KO:K03035]
OSTLU_36468  predicted protein [KO:K03036]
OSTLU_16772  predicted protein [KO:K03037]
OSTLU_41064  predicted protein [KO:K03038]
OSTLU_29386  predicted protein [KO:K03039]
OSTLU_35481  predicted protein [KO:K03030]
OSTLU_35002  predicted protein [KO:K03031]
OSTLU_29809  predicted protein [KO:K03031]
OSTLU_32033  predicted protein [KO:K10881]
OSTLU_6757  predicted protein [KO:K03029]
OSTLU_33401  predicted protein [KO:K03028]
OSTLU_39213  predicted protein [KO:K03032]
OSTLU_26573  predicted protein [KO:K06691]
OSTLU_29121  predicted protein [KO:K03061]
OSTLU_30617  predicted protein [KO:K03062]
OSTLU_33894  predicted protein [KO:K03066]
OSTLU_34331  predicted protein [KO:K03064]
OSTLU_32343  predicted protein [KO:K03065]
OSTLU_35070  predicted protein [KO:K03063]
OSTLU_41449  predicted protein [KO:K02730] [EC:3.4.25.1]
OSTLU_41065  predicted protein [KO:K02726] [EC:3.4.25.1]
OSTLU_119626  pac1; Proteasome subunit alpha type 4-like protein [KO:K02728] [EC:3.4.25.1]
OSTLU_12149  predicted protein [KO:K02731] [EC:3.4.25.1]
OSTLU_38146  predicted protein [KO:K02729] [EC:3.4.25.1]
OSTLU_119643  Psma1; alpha-type C2 proteasome subunit [KO:K02725] [EC:3.4.25.1]
OSTLU_7255  predicted protein [KO:K02727] [EC:3.4.25.1]
OSTLU_43808  predicted protein [KO:K02738] [EC:3.4.25.1]
OSTLU_39514  predicted protein [KO:K02738] [EC:3.4.25.1]
OSTLU_39963  predicted protein [KO:K02735] [EC:3.4.25.1]
OSTLU_27881  predicted protein [KO:K02734] [EC:3.4.25.1]
OSTLU_27330  predicted protein [KO:K02737] [EC:3.4.25.1]
OSTLU_33268  predicted protein [KO:K02732] [EC:3.4.25.1]
OSTLU_31764  predicted protein [KO:K02736] [EC:3.4.25.1]
OSTLU_32196  predicted protein [KO:K11599]
Reference
  Authors
Hirano Y, Murata S, Tanaka K
  Title
Large- and small-scale purification of mammalian 26S proteasomes.
  Journal
Methods Enzymol 399:227-40 (2005)
DOI:10.1016/S0076-6879(05)99015-0
Reference
  Authors
Saeki Y, Tanaka K
  Title
Cell biology: two hands for degradation.
  Journal
Nature 453:460-1 (2008)
DOI:10.1038/453460a
Reference
  Authors
Smith DM, Benaroudj N, Goldberg A
  Title
Proteasomes and their associated ATPases: a destructive combination.
  Journal
J Struct Biol 156:72-83 (2006)
DOI:10.1016/j.jsb.2006.04.012
Reference
  Authors
Strehl B, Seifert U, Kruger E, Heink S, Kuckelkorn U, Kloetzel PM
  Title
Interferon-gamma, the functional plasticity of the ubiquitin-proteasome system, and MHC class I antigen processing.
  Journal
Immunol Rev 207:19-30 (2005)
DOI:10.1111/j.0105-2896.2005.00308.x
Reference
  Authors
Darwin KH
  Title
Prokaryotic ubiquitin-like protein (Pup), proteasomes and pathogenesis.
  Journal
Nat Rev Microbiol 7:485-91 (2009)
DOI:10.1038/nrmicro2148
Reference
  Authors
Tomko RJ Jr, Hochstrasser M
  Title
Molecular architecture and assembly of the eukaryotic proteasome.
  Journal
Annu Rev Biochem 82:415-45 (2013)
DOI:10.1146/annurev-biochem-060410-150257
Reference
  Authors
Budenholzer L, Cheng CL, Li Y, Hochstrasser M
  Title
Proteasome Structure and Assembly.
  Journal
J Mol Biol 429:3500-3524 (2017)
DOI:10.1016/j.jmb.2017.05.027
Reference
  Authors
Cloos J, Roeten MS, Franke NE, van Meerloo J, Zweegman S, Kaspers GJ, Jansen G
  Title
(Immuno)proteasomes as therapeutic target in acute leukemia.
  Journal
Cancer Metastasis Rev 36:599-615 (2017)
DOI:10.1007/s10555-017-9699-4
Reference
  Authors
Sakata E, Bohn S, Mihalache O, Kiss P, Beck F, Nagy I, Nickell S, Tanaka K, Saeki Y, Forster F, Baumeister W
  Title
Localization of the proteasomal ubiquitin receptors Rpn10 and Rpn13 by electron cryomicroscopy.
  Journal
Proc Natl Acad Sci U S A 109:1479-84 (2012)
DOI:10.1073/pnas.1119394109
Related
pathway
olu04120  Ubiquitin mediated proteolysis
KO pathway
ko03050   

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