KEGG   PATHWAY: pab00230
Entry
pab00230                    Pathway                                
Name
Purine metabolism - Pyrococcus abyssi
Class
Metabolism; Nucleotide metabolism
Pathway map
pab00230  Purine metabolism
pab00230

Module
pab_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:pab00230]
pab_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:pab00230]
pab_M00968  Pentose bisphosphate pathway (nucleoside degradation), archaea, nucleoside/NMP => 3-PGA/glycerone phosphate [PATH:pab00230]
Other DBs
GO: 0006163 0042278
Organism
Pyrococcus abyssi [GN:pab]
Gene
PAB0819  pmm; PMM phosphomannomutase [KO:K15778] [EC:5.4.2.8 5.4.2.2]
PAB1114  prsA; Phosphoribosylpyrophosphate synthetase [KO:K00948] [EC:2.7.6.1]
PAB0151  purF; purF amidophosphoribosyltransferase (EC 2.4.2.14) [KO:K00764] [EC:2.4.2.14]
PAB1271  purD phosphoribosylamine--glycine ligase (EC 6.3.4.13) [KO:K01945] [EC:6.3.4.13]
PAB1268  purT phosphoribosylglycinamide formyltransferase 2 (EC 2.1.2.-) (GART 2) (GAR transformylase 2) (5'-phosphoribosylglycinamide transformylase 2) (formate-dependent GAR transformylase) [KO:K08289] [EC:6.3.1.21]
PAB1201  purL phosphoribosylformylglycinamidine synthase II (EC 6.3.5.3) [KO:K23269] [EC:6.3.5.3]
PAB3433  purS phosphoribosylformylglycinamidine (FGAM) synthase, purS component [KO:K23264] [EC:6.3.5.3]
PAB1200  purQ phosphoribosylformylglycinamidine synthase I (EC 6.3.5.3) [KO:K23265] [EC:6.3.5.3 3.5.1.2]
PAB1083  purM; purM phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1) [KO:K01933] [EC:6.3.3.1]
PAB1077  purE; purE phosphoribosylaminoimidazole carboxylase (EC 4.1.1.21) [KO:K01588] [EC:5.4.99.18]
PAB2400  purC phosphoribosylaminoimidazolesuccinocarboxamide synthase (EC 6.3.2.6) [KO:K01923] [EC:6.3.2.6]
PAB0829  purB; purB adenylosuccinate lyase (EC 4.3.2.2) [KO:K01756] [EC:4.3.2.2]
PAB0547  Putative carboligase of the ATP-grasp superfamily [KO:K06863] [EC:6.3.4.23]
PAB1272  Hypothetical protein [KO:K06863] [EC:6.3.4.23]
PAB1250  guaB inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205) (IMP dehydrogenase) (IMPDH) (IMPD) [KO:K00088] [EC:1.1.1.205]
PAB1489  ndk nucleoside diphosphate kinase [KO:K00940] [EC:2.7.4.6]
PAB1235  Xanthosine triphosphate pyrophosphatase [KO:K01519] [EC:3.6.1.66]
PAB2417  guaA-C; guaA-C GMP synthase [glutamine-hydrolyzing] pyrophosphatase subunit (EC 6.3.5.2) [KO:K01951] [EC:6.3.5.2]
PAB0549  guaA-N; guaA-N GMP synthase-glutamine amidotransferase subunit (EC 6.3.5.2) [KO:K01951] [EC:6.3.5.2]
PAB1659  Phosphorylase, PNP/MTAP family [KO:K26211] [EC:2.4.2.15]
PAB1057  nrd; nrd inteins containing ribonucleotide reductase [KO:K00525] [EC:1.17.4.1]
PAB2337  nrdD anaerobic ribonucleoside triphosphate reductase [KO:K21636] [EC:1.1.98.6]
PAB2098  Adenylate cyclase 2 [KO:K05873] [EC:4.6.1.1]
PAB0653  cyaB-like1; cyaB-like1 adenylyl cyclase, CyaB-type, putative [KO:K05873] [EC:4.6.1.1]
PAB1303  purA adenylosuccinate synthetase [KO:K01939] [EC:6.3.4.4]
PAB1982  deoA thymidine phosphorylase [KO:K18931] [EC:2.4.2.57]
PAB2140  adkA archaeal adenylate kinase (EC 2.7.4.3) (ATP-AMP transphosphorylase) [KO:K00939] [EC:2.7.4.3]
PAB0739  adkE; adkE adenylate kinase (adk) (EC 2.7.4.3) [KO:K00939] [EC:2.7.4.3]
PAB0757  Nucleotide kinase (related to CMP and AMP kinases) [KO:K18532] [EC:2.7.4.3]
PAB1537  Hypothetical ATP-binding protein, containing DUF265 domain [KO:K06928] [EC:3.6.1.15]
PAB2301  hit histidine triad protein [KO:K19710] [EC:2.7.7.53]
PAB0781  cysC; cysC adenylylsulfate kinase (EC 2.7.1.25) APS kinase [KO:K00860] [EC:2.7.1.25]
PAB1595  sat sulfate adenylyltransferase [KO:K00958] [EC:2.7.7.4]
PAB0593  cpa; cpa carbamate kinase-like carbamoylphosphate synthetase [KO:K00926] [EC:2.7.2.2]
Compound
C00002  ATP
C00008  ADP
C00011  CO2
C00014  Ammonia
C00020  AMP
C00035  GDP
C00037  Glycine
C00039  DNA
C00044  GTP
C00046  RNA
C00048  Glyoxylate
C00053  3'-Phosphoadenylyl sulfate
C00054  Adenosine 3',5'-bisphosphate
C00059  Sulfate
C00064  L-Glutamine
C00081  ITP
C00086  Urea
C00104  IDP
C00117  D-Ribose 5-phosphate
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00130  IMP
C00131  dATP
C00144  GMP
C00147  Adenine
C00169  Carbamoyl phosphate
C00206  dADP
C00209  Oxalate
C00212  Adenosine
C00224  Adenylyl sulfate
C00242  Guanine
C00262  Hypoxanthine
C00286  dGTP
C00288  HCO3-
C00294  Inosine
C00301  ADP-ribose
C00330  Deoxyguanosine
C00360  dAMP
C00361  dGDP
C00362  dGMP
C00366  Urate
C00385  Xanthine
C00387  Guanosine
C00499  Allantoate
C00559  Deoxyadenosine
C00575  3',5'-Cyclic AMP
C00603  (S)-Ureidoglycolate
C00620  alpha-D-Ribose 1-phosphate
C00655  Xanthosine 5'-phosphate
C00700  XTP
C00802  Oxalureate
C00942  3',5'-Cyclic GMP
C01228  Guanosine 3',5'-bis(diphosphate)
C01260  P1,P4-Bis(5'-adenosyl)tetraphosphate
C01261  P1,P4-Bis(5'-guanosyl) tetraphosphate
C01344  dIDP
C01345  dITP
C01367  3'-AMP
C01444  Oxamate
C01762  Xanthosine
C02091  (S)-Ureidoglycine
C02348  (R)(-)-Allantoin
C02350  (S)-Allantoin
C02353  2',3'-Cyclic AMP
C02718  N-Formiminoglycine
C03090  5-Phosphoribosylamine
C03373  Aminoimidazole ribotide
C03483  Adenosine tetraphosphate
C03614  Inosine 5'-tetraphosphate
C03794  N6-(1,2-Dicarboxyethyl)-AMP
C03838  5'-Phosphoribosylglycinamide
C04051  5-Amino-4-imidazolecarboxyamide
C04376  5'-Phosphoribosyl-N-formylglycinamide
C04392  P1,P4-Bis(5'-xanthosyl) tetraphosphate
C04494  Guanosine 3'-diphosphate 5'-triphosphate
C04640  2-(Formamido)-N1-(5'-phosphoribosyl)acetamidine
C04677  1-(5'-Phosphoribosyl)-5-amino-4-imidazolecarboxamide
C04734  1-(5'-Phosphoribosyl)-5-formamido-4-imidazolecarboxamide
C04751  1-(5-Phospho-D-ribosyl)-5-amino-4-imidazolecarboxylate
C04823  1-(5'-Phosphoribosyl)-5-amino-4-(N-succinocarboxamide)-imidazole
C05239  5-Aminoimidazole
C05512  Deoxyinosine
C05513  Urate-3-ribonucleoside
C05515  5-Ureido-4-imidazole carboxylate
C05516  5-Amino-4-imidazole carboxylate
C05993  Acetyl adenylate
C06193  Guanosine 3'-phosphate
C06194  2',3'-Cyclic GMP
C06195  Imidazolone
C06196  2'-Deoxyinosine 5'-phosphate
C06197  P1,P3-Bis(5'-adenosyl) triphosphate
C06433  5'-Benzoylphosphoadenosine
C06435  5'-Butyrylphosphoinosine
C11821  5-Hydroxyisourate
C12248  5-Hydroxy-2-oxo-4-ureido-2,5-dihydro-1H-imidazole-5-carboxylate
C15667  5-Carboxyamino-1-(5-phospho-D-ribosyl)imidazole
C22395  N6-Succino-2-amino-2'-deoxyadenylate
C22441  dZMP
C22442  dZDP
C22443  dZTP
C22499  8-Hydroxyadenine
C22500  2,8-Dihydroxyadenine
Reference
PMID:10601204
  Authors
Cusa E, Obradors N, Baldoma L, Badia J, Aguilar J.
  Title
Genetic analysis of a chromosomal region containing genes required for assimilation of allantoin nitrogen and linked glyoxylate metabolism in Escherichia coli.
  Journal
J Bacteriol 181:7479-84 (1999)
DOI:10.1128/JB.181.24.7479-7484.1999
Reference
PMID:10986234
  Authors
Xi H, Schneider BL, Reitzer L.
  Title
Purine catabolism in Escherichia coli and function of xanthine dehydrogenase in purine salvage.
  Journal
J Bacteriol 182:5332-41 (2000)
DOI:10.1128/JB.182.19.5332-5341.2000
Related
pathway
pab00030  Pentose phosphate pathway
pab00220  Arginine biosynthesis
pab00250  Alanine, aspartate and glutamate metabolism
pab00260  Glycine, serine and threonine metabolism
pab00630  Glyoxylate and dicarboxylate metabolism
pab00730  Thiamine metabolism
pab00740  Riboflavin metabolism
pab00790  Folate biosynthesis
KO pathway
ko00230   

  All links  
Genome (1)   
   KEGG GENOME (1)   
Gene (34)   
   KEGG GENES (34)   
All databases (35)   

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