KEGG   PATHWAY: pdx00230Help
Entry
pdx00230                    Pathway                                

Name
Purine metabolism - Pseudonocardia dioxanivorans
Class
Metabolism; Nucleotide metabolism
BRITE hierarchy
Pathway map
pdx00230  Purine metabolism
pdx00230

Ortholog table
Module
pdx_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:pdx00230]
pdx_M00048  Inosine monophosphate biosynthesis, PRPP + glutamine => IMP [PATH:pdx00230]
pdx_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:pdx00230]
pdx_M00050  Guanine ribonucleotide biosynthesis IMP => GDP,GTP [PATH:pdx00230]
pdx_M00546  Purine degradation, xanthine => urea [PATH:pdx00230]
Other DBs
BSID: 216954
GO: 0042278
Organism
Pseudonocardia dioxanivorans [GN:pdx]
Gene
Psed_3814  NUDIX hydrolase [KO:K01515] [EC:3.6.1.13]
Psed_3647  phosphoglucomutase, alpha-D-glucose phosphate-specific [KO:K01835] [EC:5.4.2.2]
Psed_2166  ribose-phosphate pyrophosphokinase [KO:K00948] [EC:2.7.6.1]
Psed_0875  ribose-phosphate pyrophosphokinase [KO:K00948] [EC:2.7.6.1]
Psed_0441  amidophosphoribosyltransferase [KO:K00764] [EC:2.4.2.14]
Psed_0420  Phosphoribosylamine--glycine ligase [KO:K01945] [EC:6.3.4.13]
Psed_5328  phosphoribosylglycinamide formyltransferase [KO:K11175] [EC:2.1.2.2]
Psed_3413  Phosphoribosylglycinamide formyltransferase 2 [KO:K08289] [EC:2.1.2.2]
Psed_0432  phosphoribosylformylglycinamidine synthase, purS [KO:K01952] [EC:6.3.5.3]
Psed_0433  Phosphoribosylformylglycinamidine synthase 1 [KO:K01952] [EC:6.3.5.3]
Psed_0438  Phosphoribosylformylglycinamidine synthase 2 [KO:K01952] [EC:6.3.5.3]
Psed_0442  phosphoribosylformylglycinamidine cyclo-ligase [KO:K01933] [EC:6.3.3.1]
Psed_5239  phosphoribosylaminoimidazole carboxylase, ATPase subunit [KO:K01589] [EC:6.3.4.18]
Psed_5238  phosphoribosylaminoimidazole carboxylase, catalytic subunit [KO:K01588] [EC:5.4.99.18]
Psed_0429  Phosphoribosylaminoimidazole-succinocarboxamide synthase [KO:K01923] [EC:6.3.2.6]
Psed_1621  Fumarate lyase [KO:K01756] [EC:4.3.2.2]
Psed_0428  adenylosuccinate lyase [KO:K01756] [EC:4.3.2.2]
Psed_5327  Bifunctional purine biosynthesis protein purH [KO:K00602] [EC:3.5.4.10 2.1.2.3]
Psed_1447  Phosphoribosylaminoimidazolecarboxamide formyltransferase [KO:K00602] [EC:3.5.4.10 2.1.2.3]
Psed_3579  Adenine phosphoribosyltransferase [KO:K00759] [EC:2.4.2.7]
Psed_6152  Survival protein SurE [KO:K03787] [EC:3.1.3.5]
Psed_5287  purine nucleotide phosphorylase [KO:K03783] [EC:2.4.2.1]
Psed_6129  hypoxanthine phosphoribosyltransferase [KO:K00760] [EC:2.4.2.8]
Psed_5350  IMP dehydrogenase family protein [KO:K00088] [EC:1.1.1.205]
Psed_5351  inosine-5'-monophosphate dehydrogenase [KO:K00088] [EC:1.1.1.205]
Psed_0954  IMP dehydrogenase family protein [KO:K00088] [EC:1.1.1.205]
Psed_1977  Nucleoside diphosphate kinase [KO:K00940] [EC:2.7.4.6]
Psed_1520  Nucleoside-triphosphatase rdgB [KO:K02428] [EC:3.6.1.66]
Psed_0887  MazG family protein [KO:K02428] [EC:3.6.1.66]
Psed_2360  Xanthine dehydrogenase [KO:K11177] [EC:1.17.1.4]
Psed_2359  Xanthine dehydrogenase [KO:K11178] [EC:1.17.1.4]
Psed_2358  (2Fe-2S)-binding domain-containing protein [KO:K13483]
Psed_5346  GMP synthase (glutamine-hydrolyzing) [KO:K01951] [EC:6.3.5.2]
Psed_3520  Guanylate kinase [KO:K00942] [EC:2.7.4.8]
Psed_1133  putative kinase [KO:K00942] [EC:2.7.4.8]
Psed_2869  pyruvate kinase [KO:K00873] [EC:2.7.1.40]
Psed_2125  ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent [KO:K00525] [EC:1.17.4.1]
Psed_5452  ribonucleotide-diphosphate reductase subunit beta [KO:K00526] [EC:1.17.4.1]
Psed_4457  Deoxyguanosinetriphosphate triphosphohydrolase-like protein [KO:K01129] [EC:3.1.5.1]
Psed_5397  DNA-directed RNA polymerase subunit alpha [KO:K03040] [EC:2.7.7.6]
Psed_5436  DNA-directed RNA polymerase subunit beta [KO:K03043] [EC:2.7.7.6]
Psed_5435  DNA-directed RNA polymerase subunit beta' [KO:K03046] [EC:2.7.7.6]
Psed_3519  DNA-directed RNA polymerase subunit omega [KO:K03060] [EC:2.7.7.6]
Psed_3588  DNA polymerase I [KO:K02335] [EC:2.7.7.7]
Psed_3343  DNA-directed DNA polymerase [KO:K02335] [EC:2.7.7.7]
Psed_2831  DNA polymerase III, alpha subunit [KO:K02337] [EC:2.7.7.7]
Psed_0002  DNA polymerase III, beta subunit [KO:K02338] [EC:2.7.7.7]
Psed_0348  DNA polymerase III, subunits gamma and tau [KO:K02343] [EC:2.7.7.7]
Psed_2012  DNA polymerase III, delta subunit [KO:K02340] [EC:2.7.7.7]
Psed_6489  DNA polymerase III, delta prime subunit [KO:K02341] [EC:2.7.7.7]
Psed_2761  DNA polymerase III, epsilon subunit [KO:K02342] [EC:2.7.7.7]
Psed_5637  Ppx/GppA phosphatase [KO:K01524] [EC:3.6.1.40 3.6.1.11]
Psed_0900  Ppx/GppA phosphatase [KO:K01524] [EC:3.6.1.40 3.6.1.11]
Psed_3578  (p)ppGpp synthetase I, SpoT/RelA [KO:K00951] [EC:2.7.6.5]
Psed_6171  adenylate/guanylate cyclase with integral membrane sensor [KO:K01768] [EC:4.6.1.1]
Psed_3392  adenylate/guanylate cyclase [KO:K01768] [EC:4.6.1.1]
Psed_6513  Adenylosuccinate synthetase [KO:K01939] [EC:6.3.4.4]
Psed_4554  Adenosine kinase [KO:K00856] [EC:2.7.1.20]
Psed_2099  Adenosine kinase [KO:K00856] [EC:2.7.1.20]
Psed_0702  Adenosine deaminase [KO:K01488] [EC:3.5.4.4]
Psed_5296  Adenosine deaminase [KO:K01488] [EC:3.5.4.4]
Psed_2468  Adenosine deaminase [KO:K01488] [EC:3.5.4.4]
Psed_1015  Conserved hypothetical protein CHP00730 [KO:K06966] [EC:3.2.2.- 3.2.2.10]
Psed_1016  Conserved hypothetical protein CHP00730 [KO:K06966] [EC:3.2.2.- 3.2.2.10]
Psed_2179  Conserved hypothetical protein CHP00730 [KO:K06966] [EC:3.2.2.- 3.2.2.10]
Psed_5408  Adenylate kinase [KO:K00939] [EC:2.7.4.3]
Psed_4663  Polyribonucleotide nucleotidyltransferase [KO:K00962] [EC:2.7.7.8]
Psed_0920  metallophosphoesterase [KO:K03651] [EC:3.1.4.53]
Psed_3612  histidine triad (HIT) protein [KO:K19710] [EC:2.7.7.53]
Psed_4509  sulfate adenylyltransferase, large subunit [KO:K00956] [EC:2.7.7.4]
Psed_4508  sulfate adenylyltransferase, small subunit [KO:K00957] [EC:2.7.7.4]
Psed_1766  urate oxidase [KO:K00365] [EC:1.7.3.3]
Psed_1767  hydroxyisourate hydrolase [KO:K07127] [EC:3.5.2.17]
Psed_1768  OHCU decarboxylase [KO:K16840] [EC:4.1.1.97]
Psed_1758  allantoinase [KO:K01466] [EC:3.5.2.5]
Psed_4201  Allantoinase [KO:K01466] [EC:3.5.2.5]
Psed_1757  allantoicase [KO:K01477] [EC:3.5.3.4]
Psed_6517  Urease subunit alpha [KO:K01428] [EC:3.5.1.5]
Psed_6516  Urease subunit beta [KO:K01429] [EC:3.5.1.5]
Psed_6515  Urease subunit gamma [KO:K01430] [EC:3.5.1.5]
Psed_6240  Carbamate kinase [KO:K00926] [EC:2.7.2.2]
Psed_6281  Carbamate kinase [KO:K00926] [EC:2.7.2.2]
Compound
C00002  ATP
C00008  ADP
C00011  CO2
C00014  Ammonia
C00020  AMP
C00035  GDP
C00037  Glycine
C00039  DNA
C00044  GTP
C00046  RNA
C00048  Glyoxylate
C00053  3'-Phosphoadenylyl sulfate
C00054  Adenosine 3',5'-bisphosphate
C00059  Sulfate
C00064  L-Glutamine
C00081  ITP
C00086  Urea
C00104  IDP
C00117  D-Ribose 5-phosphate
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00130  IMP
C00131  dATP
C00144  GMP
C00147  Adenine
C00169  Carbamoyl phosphate
C00206  dADP
C00209  Oxalate
C00212  Adenosine
C00224  Adenylyl sulfate
C00242  Guanine
C00262  Hypoxanthine
C00286  dGTP
C00294  Inosine
C00301  ADP-ribose
C00330  Deoxyguanosine
C00360  dAMP
C00361  dGDP
C00362  dGMP
C00366  Urate
C00385  Xanthine
C00387  Guanosine
C00499  Allantoate
C00559  Deoxyadenosine
C00575  3',5'-Cyclic AMP
C00603  (S)-Ureidoglycolate
C00620  alpha-D-Ribose 1-phosphate
C00655  Xanthosine 5'-phosphate
C00700  XTP
C00802  Oxalureate
C00942  3',5'-Cyclic GMP
C01228  Guanosine 3',5'-bis(diphosphate)
C01260  P1,P4-Bis(5'-adenosyl)tetraphosphate
C01261  P1,P4-Bis(5'-guanosyl) tetraphosphate
C01344  dIDP
C01345  dITP
C01367  3'-AMP
C01444  Oxamate
C01762  Xanthosine
C02091  (S)-Ureidoglycine
C02348  (R)(-)-Allantoin
C02350  (S)-Allantoin
C02353  2',3'-Cyclic AMP
C02718  N-Formiminoglycine
C03090  5-Phosphoribosylamine
C03373  Aminoimidazole ribotide
C03483  Adenosine tetraphosphate
C03614  Inosine 5'-tetraphosphate
C03794  N6-(1,2-Dicarboxyethyl)-AMP
C03838  5'-Phosphoribosylglycinamide
C04051  5-Amino-4-imidazolecarboxyamide
C04376  5'-Phosphoribosyl-N-formylglycinamide
C04392  P1,P4-Bis(5'-xanthosyl) tetraphosphate
C04494  Guanosine 3'-diphosphate 5'-triphosphate
C04640  2-(Formamido)-N1-(5'-phosphoribosyl)acetamidine
C04677  1-(5'-Phosphoribosyl)-5-amino-4-imidazolecarboxamide
C04734  1-(5'-Phosphoribosyl)-5-formamido-4-imidazolecarboxamide
C04751  1-(5-Phospho-D-ribosyl)-5-amino-4-imidazolecarboxylate
C04823  1-(5'-Phosphoribosyl)-5-amino-4-(N-succinocarboxamide)-imidazole
C05239  5-Aminoimidazole
C05512  Deoxyinosine
C05513  Urate-3-ribonucleoside
C05515  5-Ureido-4-imidazole carboxylate
C05516  5-Amino-4-imidazole carboxylate
C05993  Acetyl adenylate
C06193  Guanosine 3'-phosphate
C06194  2',3'-Cyclic GMP
C06195  Imidazolone
C06196  2'-Deoxyinosine 5'-phosphate
C06197  P1,P3-Bis(5'-adenosyl) triphosphate
C06433  5'-Benzoylphosphoadenosine
C06435  5'-Butyrylphosphoinosine
C11821  5-Hydroxyisourate
C12248  5-Hydroxy-2-oxo-4-ureido-2,5-dihydro-1H-imidazole-5-carboxylate
C15667  5-Carboxyamino-1-(5-phospho-D-ribosyl)imidazole
Reference
  Authors
Cusa E, Obradors N, Baldoma L, Badia J, Aguilar J.
  Title
Genetic analysis of a chromosomal region containing genes required for assimilation of allantoin nitrogen and linked glyoxylate metabolism in Escherichia coli.
  Journal
J Bacteriol 181:7479-84 (1999)
Reference
  Authors
Xi H, Schneider BL, Reitzer L.
  Title
Purine catabolism in Escherichia coli and function of xanthine dehydrogenase in purine salvage.
  Journal
J Bacteriol 182:5332-41 (2000)
DOI:10.1128/JB.182.19.5332-5341.2000
KO pathway
ko00230   

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