KEGG   PATHWAY: pgl00630Help
Entry
pgl00630                    Pathway                                

Name
Glyoxylate and dicarboxylate metabolism - Phaeobacter gallaeciensis 2.10
Class
Metabolism; Carbohydrate metabolism
BRITE hierarchy
Pathway map
Glyoxylate and dicarboxylate metabolism
pgl00630

All organismsOrtholog table
Module
Ethylmalonyl pathway [PATH:pgl00630]
Organism
Phaeobacter gallaeciensis 2.10 [GN:pgl]
Gene
glcB; malate synthase GlcB [KO:K01638] [EC:2.3.3.9]
mdh; malate dehydrogenase [KO:K00024] [EC:1.1.1.37]
gltA1; citrate synthase GltA [KO:K01647] [EC:2.3.3.1]
gltA2; citrate synthase GltA [KO:K01647] [EC:2.3.3.1]
acnA; aconitate hydratase AcnA [KO:K01681] [EC:4.2.1.3]
citrate lyase subunit beta; K08691 malyl-CoA/(S)-citramalyl-CoA lyase [EC:4.1.3.24 4.1.3.25] [KO:K08691] [EC:4.1.3.25 4.1.3.24]
fadA2; 3-ketoacyl-CoA thiolase [KO:K00626] [EC:2.3.1.9]
fadA1; 3-ketoacyl-CoA thiolase [KO:K00626] [EC:2.3.1.9]
phaA; acetyl-CoA acetyltransferase PhaA [KO:K00626] [EC:2.3.1.9]
acetyl-CoA acetyltransferase; K00626 acetyl-CoA C-acetyltransferase [EC:2.3.1.9] [KO:K00626] [EC:2.3.1.9]
phbA; acetyl-CoA acetyltransferase PhbA [KO:K00626] [EC:2.3.1.9]
phaB; acetoacetyl-CoA reductase PhaB [KO:K00023] [EC:1.1.1.36]
maoC like-like protein; K17865 3-hydroxybutyryl-CoA dehydratase [EC:4.2.1.55] [KO:K17865] [EC:4.2.1.55]
crotonyl-CoA reductase; K14446 crotonyl-CoA carboxylase/reductase [EC:1.3.1.85] [KO:K14446] [EC:1.3.1.85]
methylmalonyl-CoA epimerase; K05606 methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1] [KO:K05606] [EC:5.1.99.1]
mutB; methylmalonyl-CoA mutase large subunit [KO:K14447]
acyl-CoA dehydrogenase; K14448 (2S)-methylsuccinyl-CoA dehydrogenase [KO:K14448]
hypothetical protein; K14449 2-methylfumaryl-CoA hydratase [EC:4.2.1.148] [KO:K14449] [EC:4.2.1.148]
pccA; propionyl-CoA carboxylase subunit alpha [KO:K01965] [EC:6.4.1.3]
pccB; propionyl-CoA carboxylase subunit beta [KO:K01966] [EC:6.4.1.3]
bhbA; methylmalonyl-CoA mutase BhbA [KO:K01847] [EC:5.4.99.2]
citrate lyase subunit beta; K14451 (3S)-malyl-CoA thioesterase [KO:K14451]
glcD; glycolate oxidase subunit GlcD [KO:K00104] [EC:1.1.3.15]
glcE; glycolate oxidase subunit GlcE [KO:K11472]
glcF; glycolate oxidase iron-sulfur subunit [KO:K11473]
hypothetical protein; K03781 catalase [EC:1.11.1.6] [KO:K03781] [EC:1.11.1.6]
catalase; K03781 catalase [EC:1.11.1.6] [KO:K03781] [EC:1.11.1.6]
hydrolase; K01091 phosphoglycolate phosphatase [EC:3.1.3.18] [KO:K01091] [EC:3.1.3.18]
phosphoglycolate phosphatase; K01091 phosphoglycolate phosphatase [EC:3.1.3.18] [KO:K01091] [EC:3.1.3.18]
hydrolase; K01091 phosphoglycolate phosphatase [EC:3.1.3.18] [KO:K01091] [EC:3.1.3.18]
serine-glyoxylate aminotransferase; K00830 alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51] [KO:K00830] [EC:2.6.1.51 2.6.1.45 2.6.1.44]
glutamine synthetase; K01915 glutamine synthetase [EC:6.3.1.2] [KO:K01915] [EC:6.3.1.2]
glnA; glutamine synthetase [KO:K01915] [EC:6.3.1.2]
puuA1; gamma-glutamylputrescine synthetase PuuA [KO:K01915] [EC:6.3.1.2]
puuA2; gamma-glutamylputrescine synthetase PuuA [KO:K01915] [EC:6.3.1.2]
glutamine synthetase; K01915 glutamine synthetase [EC:6.3.1.2] [KO:K01915] [EC:6.3.1.2]
glutamine synthase-like protein; K01915 glutamine synthetase [EC:6.3.1.2] [KO:K01915] [EC:6.3.1.2]
hypothetical protein; K01915 glutamine synthetase [EC:6.3.1.2] [KO:K01915] [EC:6.3.1.2]
glyA; serine hydroxymethyltransferase GlyA [KO:K00600] [EC:2.1.2.1]
serine hydroxymethyltransferase; K00600 glycine hydroxymethyltransferase [EC:2.1.2.1] [KO:K00600] [EC:2.1.2.1]
gcvH; glycine cleavage system protein GcvH [KO:K02437]
gcvH; glycine cleavage system protein GcvH [KO:K02437]
ygbM; protein YgbM [KO:K01816] [EC:5.3.1.22]
hydroxypyruvate reductase; K00050 hydroxypyruvate reductase [EC:1.1.1.81] [KO:K00050] [EC:1.1.1.81]
glyoxylate/hydroxypyruvate reductase A; K12972 gyoxylate/hydroxypyruvate reductase A [EC:1.1.1.79 1.1.1.81] [KO:K12972] [EC:1.1.1.81 1.1.1.79]
dmlA; D-malate dehydrogenase (decarboxylating) [KO:K07246] [EC:1.1.1.83 4.1.1.73 1.1.1.93]
eda; KHG/KDPG aldolase Eda [KO:K01625] [EC:4.1.3.42 4.1.2.14]
nuoEF; NADH-quinone oxidoreductase subunits E/F [KO:K00122] [EC:1.2.1.2]
formate dehydrogenase H; K00123 formate dehydrogenase major subunit [EC:1.2.1.2] [KO:K00123] [EC:1.2.1.2]
fdhF; formate dehydrogenase H [KO:K00123] [EC:1.2.1.2]
fdhB; formate dehydrogenase iron-sulfur subunit [KO:K00124]
formate dehydrogenase gamma subunit; K00127 formate dehydrogenase subunit gamma [KO:K00127]
Compound
C00007  
Oxygen
C00011  
CO2
C00014  
Ammonia
C00022  
Pyruvate
C00024  
Acetyl-CoA
C00025  
L-Glutamate
C00026  
2-Oxoglutarate
C00027  
Hydrogen peroxide
C00036  
Oxaloacetate
C00037  
Glycine
C00042  
Succinate
C00048  
Glyoxylate
C00058  
Formate
C00064  
L-Glutamine
C00065  
L-Serine
C00091  
Succinyl-CoA
C00100  
Propanoyl-CoA
C00136  
Butanoyl-CoA
C00149  
(S)-Malate
C00158  
Citrate
C00160  
Glycolate
C00168  
Hydroxypyruvate
C00197  
3-Phospho-D-glycerate
C00209  
Oxalate
C00258  
D-Glycerate
C00266  
Glycolaldehyde
C00311  
Isocitrate
C00313  
Oxalyl-CoA
C00332  
Acetoacetyl-CoA
C00417  
cis-Aconitate
C00552  
meso-Tartaric acid
C00683  
(S)-Methylmalonyl-CoA
C00798  
Formyl-CoA
C00877  
Crotonoyl-CoA
C00888  
Pentanoyl-CoA
C00898  
(R,R)-Tartaric acid
C00975  
Dihydroxyfumarate
C00988  
2-Phosphoglycolate
C01127  
4-Hydroxy-2-oxoglutarate
C01146  
2-Hydroxy-3-oxopropanoate
C01182  
D-Ribulose 1,5-bisphosphate
C01213  
(R)-Methylmalonyl-CoA
C01380  
Ethylene glycol
C01989  
3-Ethylmalate
C01990  
3-Oxalomalate
C02123  
3-Propylmalate
C02405  
Formyl phosphate
C03217  
2-Hydroxy-3-oxoadipate
C03459  
2-Hydroxy-3-oxosuccinate
C03548  
trans-2,3-Epoxysuccinate
C03561  
(R)-3-Hydroxybutanoyl-CoA
C04348  
L-Malyl-CoA
C06027  
L-erythro-3-Methylmalyl-CoA
C06028  
2-Methylfumaryl-CoA
C06049  
N-Formylderivatives
C18026  
(2S)-Ethylmalonyl-CoA
C18324  
(2S)-Methylsuccinyl-CoA
C20238  
(2R)-Ethylmalonyl-CoA
Reference
PMID:10978349 (EC5.3.1.22)
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta -hydroxyacid dehydrogenases in Escherichia coli and Haemophilusinfluenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
Reference
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
Reference
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
KO pathway
 

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