KEGG   PATHWAY: ppx00010
Entry
ppx00010                    Pathway                                
Name
Glycolysis / Gluconeogenesis - Pseudomonas putida DOT-T1E
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
ppx00010  Glycolysis / Gluconeogenesis
ppx00010

Module
ppx_M00002  Glycolysis, core module involving three-carbon compounds [PATH:ppx00010]
ppx_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:ppx00010]
ppx_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:ppx00010]
Other DBs
GO: 0006096 0006094
Organism
Pseudomonas putida DOT-T1E [GN:ppx]
Gene
T1E_1988  glk; glucokinase [KO:K00845] [EC:2.7.1.2]
T1E_0627  pgi; Glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
T1E_3067  Glucose-6-phosphate isomerase 1 [KO:K01810] [EC:5.3.1.9]
T1E_4728  Fructose-1,6-bisphosphatase class 1 [KO:K03841] [EC:3.1.3.11]
T1E_1150  fda; Fructose-bisphosphate aldolase [KO:K01624] [EC:4.1.2.13]
T1E_0642  tpiA; Triosephosphate isomerase [KO:K01803] [EC:5.3.1.1]
T1E_1224  gap-2; glyceraldehyde-3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
T1E_1986  gapA; glyceraldehyde-3-phosphate dehydrogenase, type I [KO:K00134] [EC:1.2.1.12]
T1E_1147  pgk; Phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
T1E_0187  pgm; 2,3-bisphosphoglycerate-independent [KO:K15633] [EC:5.4.2.12]
T1E_4963  eno; Enolase [KO:K01689] [EC:4.2.1.11]
T1E_0216  pykA; pyruvate kinase [KO:K00873] [EC:2.7.1.40]
T1E_3076  ttuE; pyruvate kinase [KO:K00873] [EC:2.7.1.40]
T1E_0073  pps; Phosphoenolpyruvate synthase [KO:K01007] [EC:2.7.9.2]
T1E_2648  aceE; Pyruvate dehydrogenase E1 component [KO:K00163] [EC:1.2.4.1]
T1E_3529  dihydrolipoamide acetyltransferase [KO:K00627] [EC:2.3.1.12]
T1E_1533  acoC; branched-chain alpha-keto acid dehydrogenase [KO:K00627] [EC:2.3.1.12]
T1E_0427  lpdG; Dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
T1E_3946  lpd3; Dihydrolipoyl dehydrogenase 3 [KO:K00382] [EC:1.8.1.4]
T1E_5102  lpdV; Dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
T1E_4967  D-isomer specific 2-hydroxyacid dehydrogenase [KO:K00121] [EC:1.1.1.284 1.1.1.1]
T1E_5518  adhC; S-(hydroxymethyl)glutathione dehydrogenase [KO:K00121] [EC:1.1.1.284 1.1.1.1]
T1E_1466  adhP; alcohol dehydrogenase [KO:K13953] [EC:1.1.1.1]
T1E_5253  yahK; alcohol dehydrogenase [KO:K13979] [EC:1.1.1.2]
T1E_2683  Pyrrolo-quinoline quinone [KO:K00114] [EC:1.1.2.8]
T1E_2678  exaA; Quinoprotein ethanol dehydrogenase [KO:K00114] [EC:1.1.2.8]
T1E_1804  gluconate 2-dehydrogenase acceptor subunit [KO:K22474] [EC:1.1.5.5]
T1E_5153  gluconate 2-dehydrogenase acceptor subunit [KO:K22474] [EC:1.1.5.5]
T1E_1733  aldehyde dehydrogenase [KO:K00128] [EC:1.2.1.3]
T1E_3939  ald5; aldehyde dehydrogenase family protein [KO:K00128] [EC:1.2.1.3]
T1E_2684  Aldehyde dehydrogenase [KO:K00138] [EC:1.2.1.-]
T1E_4523  Aldehyde dehydrogenase [KO:K00138] [EC:1.2.1.-]
T1E_0550  acsA; AMP-dependent synthetase and ligase [KO:K01895] [EC:6.2.1.1]
T1E_0628  acsB; Acetyl-coenzyme A synthetase 2 [KO:K01895] [EC:6.2.1.1]
T1E_4053  Acetyl-coenzyme A synthetase 1 [KO:K01895] [EC:6.2.1.1]
T1E_1729  CoA-binding domain-containing protein [KO:K24012] [EC:6.2.1.13]
T1E_5443  yfiQ; pimeloyl-CoA synthetase [KO:K24012] [EC:6.2.1.13]
T1E_2989  yphB; aldose 1-epimerase [KO:K01785] [EC:5.1.3.3]
T1E_2283  celB; Phosphoglucomutase [KO:K01835] [EC:5.4.2.2]
T1E_3027  phosphomannomutase [KO:K15778] [EC:5.4.2.8 5.4.2.2]
T1E_4704  Phosphomannomutase/phosphoglucomutase [KO:K15778] [EC:5.4.2.8 5.4.2.2]
T1E_3982  aldose 1-epimerase [KO:K01792] [EC:5.1.3.15]
T1E_0115  gapN; aldehyde dehydrogenase [KO:K00131] [EC:1.2.1.9]
T1E_2963  Phosphoenolpyruvate carboxykinase (ATP) [KO:K01610] [EC:4.1.1.49]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
ppx00020  Citrate cycle (TCA cycle)
ppx00030  Pentose phosphate pathway
ppx00500  Starch and sucrose metabolism
ppx00620  Pyruvate metabolism
ppx00640  Propanoate metabolism
KO pathway
ko00010   

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