KEGG   PATHWAY: rpa00970
Entry
rpa00970                    Pathway                                
Name
Aminoacyl-tRNA biosynthesis - Rhodopseudomonas palustris CGA009
Class
Genetic Information Processing; Translation
Pathway map
rpa00970  Aminoacyl-tRNA biosynthesis
rpa00970

Organism
Rhodopseudomonas palustris CGA009 [GN:rpa]
Gene
TX73_017100  tRNA-Gly [KO:K14225]
TX73_017795  tRNA-Leu [KO:K14228]
TX73_015060  gltX; glutamate--tRNA ligase [KO:K01885] [EC:6.1.1.17]
TX73_003905  Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase GatCAB subunit A [KO:K02433] [EC:6.3.5.6 6.3.5.7]
TX73_007195  amidase family protein [KO:K02433] [EC:6.3.5.6 6.3.5.7]
TX73_009145  amidase [KO:K02433] [EC:6.3.5.6 6.3.5.7]
TX73_016070  gatA; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA [KO:K02433] [EC:6.3.5.6 6.3.5.7]
TX73_016055  gatB; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB [KO:K02434] [EC:6.3.5.6 6.3.5.7]
TX73_016090  gatC; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC [KO:K02435] [EC:6.3.5.6 6.3.5.7]
TX73_015055  glutamine--tRNA ligase/YqeY domain fusion protein [KO:K01886] [EC:6.1.1.18]
TX73_019920  alaS; alanine--tRNA ligase [KO:K01872] [EC:6.1.1.7]
TX73_015745  aspS; aspartate--tRNA ligase [KO:K01876] [EC:6.1.1.12]
TX73_005370  glycine--tRNA ligase subunit alpha [KO:K01878] [EC:6.1.1.14]
TX73_005380  glyS; glycine--tRNA ligase subunit beta [KO:K01879] [EC:6.1.1.14]
TX73_017610  thrS; threonine--tRNA ligase [KO:K01868] [EC:6.1.1.3]
TX73_014730  serS; serine--tRNA ligase [KO:K01875] [EC:6.1.1.11]
TX73_010290  cysS; cysteine--tRNA ligase [KO:K01883] [EC:6.1.1.16]
TX73_014385  metG; methionine--tRNA ligase [KO:K01874] [EC:6.1.1.10]
TX73_003220  fmt; methionyl-tRNA formyltransferase [KO:K00604] [EC:2.1.2.9]
TX73_013370  valine--tRNA ligase [KO:K01873] [EC:6.1.1.9]
TX73_001495  leuS; leucine--tRNA ligase [KO:K01869] [EC:6.1.1.4]
TX73_022690  ileS; isoleucine--tRNA ligase [KO:K01870] [EC:6.1.1.5]
TX73_024350  lysine--tRNA ligase [KO:K04566] [EC:6.1.1.6]
TX73_014780  argS; arginine--tRNA ligase [KO:K01887] [EC:6.1.1.19]
TX73_015175  proline--tRNA ligase [KO:K01881] [EC:6.1.1.15]
TX73_006045  hisS; histidine--tRNA ligase [KO:K01892] [EC:6.1.1.21]
TX73_000190  pheS; phenylalanine--tRNA ligase subunit alpha [KO:K01889] [EC:6.1.1.20]
TX73_000180  pheT; phenylalanine--tRNA ligase subunit beta [KO:K01890] [EC:6.1.1.20]
TX73_012720  tyrS; tyrosine--tRNA ligase [KO:K01866] [EC:6.1.1.1]
TX73_002360  trpS; tryptophan--tRNA ligase [KO:K01867] [EC:6.1.1.2]
Compound
C00025  L-Glutamate
C00037  Glycine
C00041  L-Alanine
C00047  L-Lysine
C00049  L-Aspartate
C00062  L-Arginine
C00064  L-Glutamine
C00065  L-Serine
C00073  L-Methionine
C00078  L-Tryptophan
C00079  L-Phenylalanine
C00082  L-Tyrosine
C00097  L-Cysteine
C00101  Tetrahydrofolate
C00123  L-Leucine
C00135  L-Histidine
C00148  L-Proline
C00152  L-Asparagine
C00183  L-Valine
C00188  L-Threonine
C00234  10-Formyltetrahydrofolate
C00407  L-Isoleucine
C00886  L-Alanyl-tRNA
C01005  O-Phospho-L-serine
C01931  L-Lysyl-tRNA
C02047  L-Leucyl-tRNA
C02163  L-Arginyl-tRNA(Arg)
C02282  Glutaminyl-tRNA
C02412  Glycyl-tRNA(Gly)
C02430  L-Methionyl-tRNA
C02553  L-Seryl-tRNA(Ser)
C02554  L-Valyl-tRNA(Val)
C02702  L-Prolyl-tRNA(Pro)
C02839  L-Tyrosyl-tRNA(Tyr)
C02984  L-Aspartyl-tRNA(Asp)
C02987  L-Glutamyl-tRNA(Glu)
C02988  L-Histidyl-tRNA(His)
C02992  L-Threonyl-tRNA(Thr)
C03125  L-Cysteinyl-tRNA(Cys)
C03127  L-Isoleucyl-tRNA(Ile)
C03294  N-Formylmethionyl-tRNA
C03402  L-Asparaginyl-tRNA(Asn)
C03511  L-Phenylalanyl-tRNA(Phe)
C03512  L-Tryptophanyl-tRNA(Trp)
C06112  L-Glutamyl-tRNA(Gln)
C06113  L-Aspartyl-tRNA(Asn)
C06481  L-Seryl-tRNA(Sec)
C06482  L-Selenocysteinyl-tRNA(Sec)
C16138  L-Pyrrolysine
C16638  O-Phosphoseryl-tRNA(Sec)
C17022  O-Phosphoseryl-tRNA(Cys)
C17027  L-Pyrrolysyl-tRNA(Pyl)
Reference
PMID:18252769
  Authors
Sheppard K, Yuan J, Hohn MJ, Jester B, Devine KM, Soll D
  Title
From one amino acid to another: tRNA-dependent amino acid biosynthesis.
  Journal
Nucleic Acids Res 36:1813-25 (2008)
DOI:10.1093/nar/gkn015
Reference
PMID:15314242
  Authors
Polycarpo C, Ambrogelly A, Berube A, Winbush SM, McCloskey JA, Crain PF, Wood JL, Soll D
  Title
An aminoacyl-tRNA synthetase that specifically activates pyrrolysine.
  Journal
Proc Natl Acad Sci U S A 101:12450-4 (2004)
DOI:10.1073/pnas.0405362101
Related
pathway
rpa00250  Alanine, aspartate and glutamate metabolism
rpa00260  Glycine, serine and threonine metabolism
rpa00270  Cysteine and methionine metabolism
rpa00290  Valine, leucine and isoleucine biosynthesis
rpa00300  Lysine biosynthesis
rpa00330  Arginine and proline metabolism
rpa00340  Histidine metabolism
rpa00380  Tryptophan metabolism
rpa00400  Phenylalanine, tyrosine and tryptophan biosynthesis
KO pathway
ko00970   

  All links  
Genome (1)   
   KEGG GENOME (1)   
Gene (30)   
   KEGG GENES (30)   
All databases (31)   

Download RDF
DBGET integrated database retrieval system