KEGG   PATHWAY: rsq03430
Entry
rsq03430                    Pathway                                
Name
Mismatch repair - Cereibacter sphaeroides ATCC 17025
Description
DNA mismatch repair (MMR) is a highly conserved biological pathway that plays a key role in maintaining genomic stability. MMR corrects DNA mismatches generated during DNA replication, thereby preventing mutations from becoming permanent in dividing cells. MMR also suppresses homologous recombination and was recently shown to play a role in DNA damage signaling. Defects in MMR are associated with genome-wide instability, predisposition to certain types of cancer including HNPCC, resistance to certain chemotherapeutic agents, and abnormalities in meiosis and sterility in mammalian systems.
The Escherichia coli MMR pathway has been extensively studied and is well characterized. In E. coli, the mismatch-activated MutS-MutL-ATP complex licenses MutH to incise the nearest unmethylated GATC sequence. UvrD and an exonuclease generate a gap. This gap is filled by pol III and DNA ligase. The GATC sites are then methylated by Dam. Several human MMR proteins have been identified based on their homology to E. coli MMR proteins. These include human homologs of MutS and MutL. Although E. coli MutS and MutL proteins are homodimers, human MutS and MutL homologs are heterodimers. The role of hemimethylated dGATC sites as a signal for strand discrimination is not conserved from E. coli to human. Human MMR is presumed to be nick-directed in vivo, and is thought to discriminate daughter and template strands using a strand-specific nick.
Class
Genetic Information Processing; Replication and repair
Pathway map
rsq03430  Mismatch repair
rsq03430

Other DBs
GO: 0006298
Organism
Cereibacter sphaeroides ATCC 17025 [GN:rsq]
Gene
Rsph17025_2655  DNA mismatch repair protein MutS [KO:K03555]
Rsph17025_2933  DNA mismatch repair protein MutL [KO:K03572]
Rsph17025_0678  ATP-dependent DNA helicase, Rep family [KO:K03657] [EC:5.6.2.4]
Rsph17025_0634  Exodeoxyribonuclease VII large subunit [KO:K03601] [EC:3.1.11.6]
Rsph17025_2790  Exodeoxyribonuclease VII small subunit [KO:K03602] [EC:3.1.11.6]
Rsph17025_0832  single-stranded-DNA-specific exonuclease RecJ [KO:K07462] [EC:3.1.-.-]
Rsph17025_0451  single-strand binding protein [KO:K03111]
Rsph17025_1816  single-strand binding protein [KO:K03111]
Rsph17025_3949  hypothetical protein [KO:K02337] [EC:2.7.7.7]
Rsph17025_0003  DNA polymerase III, beta subunit [KO:K02338] [EC:2.7.7.7]
Rsph17025_0521  DNA polymerase III, subunits gamma and tau [KO:K02343] [EC:2.7.7.7]
Rsph17025_3137  DNA polymerase III, delta subunit [KO:K02340] [EC:2.7.7.7]
Rsph17025_0556  DNA polymerase III, delta prime subunit [KO:K02341] [EC:2.7.7.7]
Rsph17025_0503  DNA polymerase III, epsilon subunit [KO:K02342] [EC:2.7.7.7]
Rsph17025_2673  DNA polymerase III, epsilon subunit [KO:K02342] [EC:2.7.7.7]
Rsph17025_3538  Transposase and inactivated derivatives-like protein [KO:K02342] [EC:2.7.7.7]
Rsph17025_1123  DNA polymerase III chi subunit, HolC [KO:K02339] [EC:2.7.7.7]
Rsph17025_1159  DNA ligase, NAD-dependent [KO:K01972] [EC:6.5.1.2]
Reference
  Authors
Jiricny J.
  Title
The multifaceted mismatch-repair system.
  Journal
Nat Rev Mol Cell Biol 7:335-46 (2006)
DOI:10.1038/nrm1907
Reference
  Authors
Li GM.
  Title
Mechanisms and functions of DNA mismatch repair.
  Journal
Cell Res 18:85-98 (2008)
DOI:10.1038/cr.2007.115
Reference
  Authors
Marti TM, Kunz C, Fleck O.
  Title
DNA mismatch repair and mutation avoidance pathways.
  Journal
J Cell Physiol 191:28-41 (2002)
DOI:10.1002/jcp.10077
Reference
  Authors
Ikejima M, Shimada T.
  Title
[Molecular mechanism of mismatch repair]
  Journal
Tanpakushitsu Kakusan Koso 46:1124-9 (2001)
KO pathway
ko03430   

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