KEGG   PATHWAY: saga00230
Entry
saga00230                   Pathway                                
Name
Purine metabolism - Simiduia agarivorans
Class
Metabolism; Nucleotide metabolism
Pathway map
saga00230  Purine metabolism
saga00230

Module
saga_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:saga00230]
saga_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:saga00230]
saga_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:saga00230]
saga_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:saga00230]
saga_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:saga00230]
Other DBs
GO: 0006163 0042278
Organism
Simiduia agarivorans [GN:saga]
Gene
M5M_11130  nudF; ADP-ribose pyrophosphatase NudF [KO:K01515] [EC:3.6.1.13 3.6.1.-]
M5M_12800  phosphomannomutase [KO:K15778] [EC:5.4.2.8 5.4.2.2]
M5M_09335  ribose-phosphate pyrophosphokinase [KO:K00948] [EC:2.7.6.1]
M5M_00630  amidophosphoribosyltransferase [KO:K00764] [EC:2.4.2.14]
M5M_15610  phosphoribosylamine--glycine ligase [KO:K01945] [EC:6.3.4.13]
M5M_05605  phosphoribosylglycinamide formyltransferase [KO:K11175] [EC:2.1.2.2]
M5M_03560  phosphoribosylformylglycinamidine synthase [KO:K01952] [EC:6.3.5.3]
M5M_05600  phosphoribosylformylglycinamidine cyclo-ligase [KO:K01933] [EC:6.3.3.1]
M5M_09900  phosphoribosylaminoimidazole carboxylase ATPase subunit [KO:K01589] [EC:6.3.4.18]
M5M_09895  phosphoribosylaminoimidazole carboxylase catalytic subunit [KO:K01588] [EC:5.4.99.18]
M5M_16070  phosphoribosylaminoimidazole-succinocarboxamide synthase [KO:K01923] [EC:6.3.2.6]
M5M_03165  adenylosuccinate lyase [KO:K01756] [EC:4.3.2.2]
M5M_15615  bifunctional purine biosynthesis protein PurH [KO:K00602] [EC:2.1.2.3 3.5.4.10]
M5M_03250  5'-nucleotidase [KO:K01081] [EC:3.1.3.5]
M5M_13240  HAD-superfamily hydrolase [KO:K20881] [EC:3.1.3.-]
M5M_00855  hypothetical protein [KO:K09913] [EC:2.4.2.1 2.4.2.2]
M5M_17700  YfiH [KO:K05810] [EC:2.4.2.1 2.4.2.28 3.5.4.4]
M5M_01185  hypoxanthine-guanine phosphoribosyltransferase [KO:K00760] [EC:2.4.2.8]
M5M_19275  inosine-5'-monophosphate dehydrogenase [KO:K00088] [EC:1.1.1.205]
M5M_04715  ndk; multifunctional nucleoside diphosphate kinase/apyrimidinic endonuclease/3'-phosphodiesterase [KO:K00940] [EC:2.7.4.6]
M5M_11340  dITP/XTP pyrophosphatase [KO:K01519] [EC:3.6.1.66]
M5M_19280  guaA; GMP synthase [KO:K01951] [EC:6.3.5.2]
M5M_12760  guanylate kinase [KO:K00942] [EC:2.7.4.8]
M5M_15110  ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent [KO:K00525] [EC:1.17.4.1]
M5M_05085  ribonucleotide-diphosphate reductase subunit alpha [KO:K00525] [EC:1.17.4.1]
M5M_07795  ribonucleotide-diphosphate reductase subunit beta [KO:K00526] [EC:1.17.4.1]
M5M_06145  deoxyguanosinetriphosphate triphosphohydrolase [KO:K01129] [EC:3.1.5.1]
M5M_17085  5'-nucleotidase [KO:K08722] [EC:3.1.3.89]
M5M_12750  guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase [KO:K01139] [EC:2.7.6.5 3.1.7.2]
M5M_03845  Ppx/GppA phosphatase [KO:K01524] [EC:3.6.1.11 3.6.1.40]
M5M_03295  GTP pyrophosphokinase [KO:K00951] [EC:2.7.6.5]
M5M_04080  putative adenylate cyclase [KO:K01768] [EC:4.6.1.1]
M5M_04840  hypothetical protein [KO:K01768] [EC:4.6.1.1]
M5M_11820  cyaA; adenylate cyclase [KO:K05851] [EC:4.6.1.1]
M5M_15380  adenylosuccinate synthetase [KO:K01939] [EC:6.3.4.4]
M5M_01295  adk; adenylate kinase [KO:K00939] [EC:2.7.4.3]
M5M_03290  mazG; nucleoside triphosphate pyrophosphohydrolase [KO:K04765] [EC:3.6.1.9]
M5M_11120  icc protein [KO:K03651] [EC:3.1.4.53]
M5M_15520  apaH; diadenosine tetraphosphatase [KO:K01525] [EC:3.6.1.41]
M5M_02525  adenylylsulfate kinase [KO:K00860] [EC:2.7.1.25]
M5M_02590  cysN; sulfate adenylyltransferase subunit 1 [KO:K00956] [EC:2.7.7.4]
M5M_02585  sulfate adenylyltransferase subunit 2 [KO:K00957] [EC:2.7.7.4]
Compound
C00002  ATP
C00008  ADP
C00011  CO2
C00014  Ammonia
C00020  AMP
C00035  GDP
C00037  Glycine
C00039  DNA
C00044  GTP
C00046  RNA
C00048  Glyoxylate
C00053  3'-Phosphoadenylyl sulfate
C00054  Adenosine 3',5'-bisphosphate
C00059  Sulfate
C00064  L-Glutamine
C00081  ITP
C00086  Urea
C00104  IDP
C00117  D-Ribose 5-phosphate
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00130  IMP
C00131  dATP
C00144  GMP
C00147  Adenine
C00169  Carbamoyl phosphate
C00206  dADP
C00209  Oxalate
C00212  Adenosine
C00224  Adenylyl sulfate
C00242  Guanine
C00262  Hypoxanthine
C00286  dGTP
C00288  HCO3-
C00294  Inosine
C00301  ADP-ribose
C00330  Deoxyguanosine
C00360  dAMP
C00361  dGDP
C00362  dGMP
C00366  Urate
C00385  Xanthine
C00387  Guanosine
C00499  Allantoate
C00559  Deoxyadenosine
C00575  3',5'-Cyclic AMP
C00603  (S)-Ureidoglycolate
C00620  alpha-D-Ribose 1-phosphate
C00655  Xanthosine 5'-phosphate
C00700  XTP
C00802  Oxalureate
C00942  3',5'-Cyclic GMP
C01228  Guanosine 3',5'-bis(diphosphate)
C01260  P1,P4-Bis(5'-adenosyl)tetraphosphate
C01261  P1,P4-Bis(5'-guanosyl) tetraphosphate
C01344  dIDP
C01345  dITP
C01367  3'-AMP
C01444  Oxamate
C01762  Xanthosine
C02091  (S)-Ureidoglycine
C02348  (R)(-)-Allantoin
C02350  (S)-Allantoin
C02353  2',3'-Cyclic AMP
C02718  N-Formiminoglycine
C03090  5-Phosphoribosylamine
C03373  Aminoimidazole ribotide
C03483  Adenosine tetraphosphate
C03614  Inosine 5'-tetraphosphate
C03794  N6-(1,2-Dicarboxyethyl)-AMP
C03838  5'-Phosphoribosylglycinamide
C04051  5-Amino-4-imidazolecarboxyamide
C04376  5'-Phosphoribosyl-N-formylglycinamide
C04392  P1,P4-Bis(5'-xanthosyl) tetraphosphate
C04494  Guanosine 3'-diphosphate 5'-triphosphate
C04640  2-(Formamido)-N1-(5'-phosphoribosyl)acetamidine
C04677  1-(5'-Phosphoribosyl)-5-amino-4-imidazolecarboxamide
C04734  1-(5'-Phosphoribosyl)-5-formamido-4-imidazolecarboxamide
C04751  1-(5-Phospho-D-ribosyl)-5-amino-4-imidazolecarboxylate
C04823  1-(5'-Phosphoribosyl)-5-amino-4-(N-succinocarboxamide)-imidazole
C05239  5-Aminoimidazole
C05512  Deoxyinosine
C05513  Urate-3-ribonucleoside
C05515  5-Ureido-4-imidazole carboxylate
C05516  5-Amino-4-imidazole carboxylate
C05993  Acetyl adenylate
C06193  Guanosine 3'-phosphate
C06194  2',3'-Cyclic GMP
C06195  Imidazolone
C06196  2'-Deoxyinosine 5'-phosphate
C06197  P1,P3-Bis(5'-adenosyl) triphosphate
C06433  5'-Benzoylphosphoadenosine
C06435  5'-Butyrylphosphoinosine
C11821  5-Hydroxyisourate
C12248  5-Hydroxy-2-oxo-4-ureido-2,5-dihydro-1H-imidazole-5-carboxylate
C15667  5-Carboxyamino-1-(5-phospho-D-ribosyl)imidazole
C22395  N6-Succino-2-amino-2'-deoxyadenylate
C22441  dZMP
C22442  dZDP
C22443  dZTP
C22499  8-Hydroxyadenine
C22500  2,8-Dihydroxyadenine
Reference
PMID:10601204
  Authors
Cusa E, Obradors N, Baldoma L, Badia J, Aguilar J.
  Title
Genetic analysis of a chromosomal region containing genes required for assimilation of allantoin nitrogen and linked glyoxylate metabolism in Escherichia coli.
  Journal
J Bacteriol 181:7479-84 (1999)
DOI:10.1128/JB.181.24.7479-7484.1999
Reference
PMID:10986234
  Authors
Xi H, Schneider BL, Reitzer L.
  Title
Purine catabolism in Escherichia coli and function of xanthine dehydrogenase in purine salvage.
  Journal
J Bacteriol 182:5332-41 (2000)
DOI:10.1128/JB.182.19.5332-5341.2000
Related
pathway
saga00030  Pentose phosphate pathway
saga00220  Arginine biosynthesis
saga00250  Alanine, aspartate and glutamate metabolism
saga00260  Glycine, serine and threonine metabolism
saga00340  Histidine metabolism
saga00630  Glyoxylate and dicarboxylate metabolism
saga00730  Thiamine metabolism
saga00740  Riboflavin metabolism
saga00790  Folate biosynthesis
KO pathway
ko00230   

  All links  
Genome (1)   
   KEGG GENOME (1)   
Gene (42)   
   KEGG GENES (42)   
All databases (43)   

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