KEGG PATHWAY: sds00240

PATHWAY: sds00240

Entry

sds00240 Pathway

Name

Pyrimidine metabolism - Streptococcus dysgalactiae subsp. equisimilis GGS_124

Class

Metabolism; Nucleotide metabolism

Pathway map

sds00240

Pyrimidine metabolism

Module

sds_M00046	Pyrimidine degradation, uracil => beta-alanine, thymine => 3-aminoisobutanoate [PATH:sds00240]
sds_M00051	Uridine monophosphate biosynthesis, glutamine (+ PRPP) => UMP [PATH:sds00240]
sds_M00052	Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:sds00240]
sds_M00053	Pyrimidine deoxyribonuleotide biosynthesis, CDP/CTP => dCDP/dCTP,dTDP/dTTP [PATH:sds00240]

Other DBs

BSID:

102815

GO:

0006220

Organism

Streptococcus dysgalactiae subsp. equisimilis GGS_124 [GN:sds]

Gene

SDEG_0797	carB; carbamoyl phosphate synthase large subunit [KO:K01955] [EC:6.3.5.5]
SDEG_0796	carA; carbamoyl phosphate synthase small subunit [KO:K01956] [EC:6.3.5.5]
SDEG_1176	pyrC; dihydroorotase [KO:K01465] [EC:3.5.2.3]
SDEG_1471	pyrD; dihydroorotate dehydrogenase 1A [KO:K00226] [EC:1.3.98.1]
SDEG_1184	pyrE; orotate phosphoribosyl transferase [KO:K00762] [EC:2.4.2.10]
SDEG_1185	pyrF; orotidine 5'-phosphate decarboxylase [KO:K01591] [EC:4.1.1.23]
SDEG_0769	cmk; cytidylate kinase [KO:K00945] [EC:2.7.4.14]
SDEG_0497	pyrH; uridylate kinase [KO:K09903] [EC:2.7.4.22]
SDEG_1223	ndk; nucleoside diphosphate kinase [KO:K00940] [EC:2.7.4.6]
SDEG_0259	polynucleotide phosphorylase/polyadenylase; K00962 polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] [KO:K00962] [EC:2.7.7.8]
SDEG_0414	deoxyribonucleotide triphosphate pyrophosphatase/hypothetical protein; K02428 dITP/XTP pyrophosphatase [EC:3.6.1.19] [KO:K02428] [EC:3.6.1.19]
SDEG_0329	pyrG; CTP synthetase [KO:K01937] [EC:6.3.4.2]
SDEG_0097	rpoA; DNA-directed RNA polymerase subunit alpha [KO:K03040] [EC:2.7.7.6]
SDEG_0131	rpoB; DNA-directed RNA polymerase subunit beta [KO:K03043] [EC:2.7.7.6]
SDEG_0132	rpoC; DNA-directed RNA polymerase subunit beta' [KO:K03046] [EC:2.7.7.6]
SDEG_0328	DNA-directed RNA polymerase subunit delta; K03048 DNA-directed RNA polymerase subunit delta [KO:K03048]
SDEG_1696	DNA-directed RNA polymerase subunit omega; K03060 DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] [KO:K03060] [EC:2.7.7.6]
SDEG_2002	DNA polymerase I; K02335 DNA polymerase I [EC:2.7.7.7] [KO:K02335] [EC:2.7.7.7]
SDEG_1096	dnaE; DNA polymerase III DnaE [KO:K02337] [EC:2.7.7.7]
SDEG_0247	polC; DNA polymerase III PolC [KO:K03763] [EC:2.7.7.7]
SDEG_0002	dnaN; DNA polymerase III subunit beta [KO:K02338] [EC:2.7.7.7]
SDEG_1375	DNA polymerase III subunits gamma and tau; K02343 DNA polymerase III subunit gamma/tau [EC:2.7.7.7] [KO:K02343] [EC:2.7.7.7]
SDEG_1448	holA; DNA polymerase III subunit delta [KO:K02340] [EC:2.7.7.7]
SDEG_0450	DNA polymerase III subunit delta'; K02341 DNA polymerase III subunit delta' [EC:2.7.7.7] [KO:K02341] [EC:2.7.7.7]
SDEG_1915	dnaQ; DNA polymerase III subunit epsilon [KO:K02342] [EC:2.7.7.7]
SDEG_1379	udk; uridine kinase [KO:K00876] [EC:2.7.1.48]
SDEG_1288	hypothetical protein; K00876 uridine kinase [EC:2.7.1.48] [KO:K00876] [EC:2.7.1.48]
SDEG_0825	cell surface 5'-nucleotidase; K01081 5'-nucleotidase [EC:3.1.3.5] [KO:K01081] [EC:3.1.3.5]
SDEG_0438	upp; uracil phosphoribosyltransferase [KO:K00761] [EC:2.4.2.9]
SDEG_0793	pyrR; bifunctional pyrimidine regulatory protein PyrR/uracil phosphoribosyltransferase [KO:K02825] [EC:2.4.2.9]
SDEG_1050	pdp; pyrimidine-nucleoside phosphorylase [KO:K00756] [EC:2.4.2.2]
SDEG_1716	thioredoxin reductase; K00384 thioredoxin reductase (NADPH) [EC:1.8.1.9] [KO:K00384] [EC:1.8.1.9]
SDEG_0808	trxB; thioredoxin reductase [KO:K00384] [EC:1.8.1.9]
SDEG_2078	nrdD; anaerobic ribonucleoside triphosphate reductase [KO:K00527] [EC:1.17.4.2]
SDEG_1423	nrdE.2; ribonucleotide-diphosphate reductase subunit alpha [KO:K00525] [EC:1.17.4.1]
SDEG_0476	nrdE1; ribonucleotide-diphosphate reductase subunit alpha [KO:K00525] [EC:1.17.4.1]
SDEG_1424	nrdF; ribonucleotide-diphosphate reductase subunit beta [KO:K00526] [EC:1.17.4.1]
SDEG_0474	nrdF1; ribonucleotide-diphosphate reductase subunit beta [KO:K00526] [EC:1.17.4.1]
SDEG_1974	dut; deoxyuridine 5'-triphosphate nucleotidohydrolase [KO:K01520] [EC:3.6.1.23]
SDEG_0845	thyA; thymidylate synthase [KO:K00560] [EC:2.1.1.45]
SDEG_1048	cdd; cytidine deaminase [KO:K01489] [EC:3.5.4.5]
SDEG_1190	punA; purine nucleoside phosphorylase [KO:K03783] [EC:2.4.2.1]
SDEG_1189	deoD; purine nucleoside phosphorylase [KO:K03784] [EC:2.4.2.1]
SDEG_1877	comEB; ComE operon protein 2 [KO:K01493] [EC:3.5.4.12]
SDEG_0899	tdk; thymidine kinase Tdk [KO:K00857] [EC:2.7.1.21]
SDEG_0449	tmk; thymidylate kinase [KO:K00943] [EC:2.7.4.9]

Compound

C00015	UDP
C00029	UDP-glucose
C00039	DNA
C00046	RNA
C00055	CMP
C00063	CTP
C00064	L-Glutamine
C00075	UTP
C00086	Urea
C00099	beta-Alanine
C00105	UMP
C00106	Uracil
C00112	CDP
C00119	5-Phospho-alpha-D-ribose 1-diphosphate
C00169	Carbamoyl phosphate
C00178	Thymine
C00214	Thymidine
C00222	3-Oxopropanoate
C00239	dCMP
C00295	Orotate
C00299	Uridine
C00337	(S)-Dihydroorotate
C00342	Thioredoxin
C00343	Thioredoxin disulfide
C00363	dTDP
C00364	dTMP
C00365	dUMP
C00380	Cytosine
C00383	Malonate
C00429	5,6-Dihydrouracil
C00438	N-Carbamoyl-L-aspartate
C00458	dCTP
C00459	dTTP
C00460	dUTP
C00475	Cytidine
C00526	Deoxyuridine
C00672	2-Deoxy-D-ribose 1-phosphate
C00705	dCDP
C00813	Barbiturate
C00881	Deoxycytidine
C00906	5,6-Dihydrothymine
C01013	3-Hydroxypropanoate
C01103	Orotidine 5'-phosphate
C01168	Pseudouridine 5'-phosphate
C01346	dUDP
C01368	3'-UMP
C01563	Carbamate
C02067	Pseudouridine
C02170	Methylmalonate
C02354	2',3'-Cyclic CMP
C02355	2',3'-Cyclic UMP
C02376	5-Methylcytosine
C02642	3-Ureidopropionate
C03997	5-Hydroxymethyldeoxycytidylate
C05100	3-Ureidoisobutyrate
C05145	3-Aminoisobutyric acid
C05281	5-Methylbarbiturate
C05822	3'-CMP
C06198	P1,P4-Bis(5'-uridyl) tetraphosphate
C11038	2'-Deoxy-5-hydroxymethylcytidine-5'-diphosphate
C11039	2'-Deoxy-5-hydroxymethylcytidine-5'-triphosphate
C15607	3-Oxo-3-ureidopropanoate
C20231	(Z)-3-Ureidoacrylate peracid
C20249	(Z)-3-Peroxyaminoacrylate
C20253	Aminoacrylate
C20254	Ureidoacrylate

KO pathway

ko00240

All links

Pathway (2)   
   KEGG MODULE (1)   
   BioSystems (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (46)   
   KEGG GENES (46)   
All databases (49)   

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