KEGG   PATHWAY: sid00030
Entry
sid00030                    Pathway                                
Name
Pentose phosphate pathway - Sulfolobus islandicus M.16.4
Description
The pentose phosphate pathway is a process of glucose turnover that produces NADPH as reducing equivalents and pentoses as essential parts of nucleotides. There are two different phases in the pathway. One is irreversible oxidative phase in which glucose-6P is converted to ribulose-5P by oxidative decarboxylation, and NADPH is generated [MD:M00006]. The other is reversible non-oxidative phase in which phosphorylated sugars are interconverted to generate xylulose-5P, ribulose-5P, and ribose-5P [MD:M00007]. Phosphoribosyl pyrophosphate (PRPP) formed from ribose-5P [MD:M00005] is an activated compound used in the biosynthesis of histidine and purine/pyrimidine nucleotides. This pathway map also shows the Entner-Doudoroff pathway where 6-P-gluconate is dehydrated and then cleaved into pyruvate and glyceraldehyde-3P [MD:M00008].
Class
Metabolism; Carbohydrate metabolism
Pathway map
sid00030  Pentose phosphate pathway
sid00030

Module
sid_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:sid00030]
sid_M00309  Non-phosphorylative Entner-Doudoroff pathway, gluconate/galactonate => glycerate [PATH:sid00030]
sid_M00580  Pentose phosphate pathway, archaea, fructose 6P => ribose 5P [PATH:sid00030]
sid_M00633  Semi-phosphorylative Entner-Doudoroff pathway, gluconate/galactonate => glycerate-3P [PATH:sid00030]
Other DBs
GO: 0006098
Organism
Sulfolobus islandicus M.16.4 [GN:sid]
Gene
M164_0092  bifunctional phosphoglucose/phosphomannose isomerase [KO:K15916] [EC:5.3.1.9 5.3.1.8]
M164_1848  Transketolase central region [KO:K00615] [EC:2.2.1.1]
M164_1849  Transketolase domain protein [KO:K00615] [EC:2.2.1.1]
M164_1228  ribose 5-phosphate isomerase [KO:K01807] [EC:5.3.1.6]
M164_1939  Orotidine 5'-phosphate decarboxylase [KO:K08093] [EC:4.1.2.43]
M164_1993  6-phospho 3-hexuloisomerase [KO:K08094] [EC:5.3.1.27]
M164_2117  ribokinase [KO:K00852] [EC:2.7.1.15]
M164_0256  PfkB domain protein [KO:K00852] [EC:2.7.1.15]
M164_1935  Phosphoglucosamine mutase [KO:K15778] [EC:5.4.2.8 5.4.2.2]
M164_1165  ribose-phosphate pyrophosphokinase [KO:K00948] [EC:2.7.6.1]
M164_2166  dihydrodipicolinate synthetase [KO:K11395] [EC:4.1.2.55]
M164_2168  Aldehyde Dehydrogenase [KO:K18978] [EC:1.2.1.90]
M164_2635  short-chain dehydrogenase/reductase SDR [KO:K00034] [EC:1.1.1.47]
M164_2317  Alcohol dehydrogenase GroES domain protein [KO:K18125] [EC:1.1.1.359]
M164_2360  Alcohol dehydrogenase GroES domain protein [KO:K18125] [EC:1.1.1.359]
M164_2160  Alcohol dehydrogenase GroES domain protein [KO:K18125] [EC:1.1.1.359]
M164_2165  Mandelate racemase/muconate lactonizing protein [KO:K05308] [EC:4.2.1.140]
M164_2634  Mandelate racemase/muconate lactonizing protein [KO:K05308] [EC:4.2.1.140]
M164_2167  PfkB domain protein [KO:K18126] [EC:2.7.1.178]
M164_2658  aldehyde oxidase and xanthine dehydrogenase molybdopterin binding [KO:K18020] [EC:1.2.99.8]
M164_2660  molybdopterin dehydrogenase FAD-binding [KO:K18021] [EC:1.2.99.8]
M164_2659  (2Fe-2S)-binding domain protein [KO:K18022] [EC:1.2.99.8]
M164_1468  Hydroxypyruvate reductase [KO:K11529] [EC:2.7.1.165]
M164_2142  Fructose-bisphosphate aldolase [KO:K11645] [EC:4.1.2.13]
M164_1862  protein of unknown function DUF100 [KO:K01622] [EC:4.1.2.13 3.1.3.11]
Compound
C00022  Pyruvate
C00031  D-Glucose
C00085  D-Fructose 6-phosphate
C00117  D-Ribose 5-phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00121  D-Ribose
C00197  3-Phospho-D-glycerate
C00198  D-Glucono-1,5-lactone
C00199  D-Ribulose 5-phosphate
C00204  2-Dehydro-3-deoxy-D-gluconate
C00221  beta-D-Glucose
C00231  D-Xylulose 5-phosphate
C00257  D-Gluconic acid
C00258  D-Glycerate
C00279  D-Erythrose 4-phosphate
C00345  6-Phospho-D-gluconate
C00354  D-Fructose 1,6-bisphosphate
C00577  D-Glyceraldehyde
C00620  alpha-D-Ribose 1-phosphate
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C00672  2-Deoxy-D-ribose 1-phosphate
C00673  2-Deoxy-D-ribose 5-phosphate
C01151  D-Ribose 1,5-bisphosphate
C01172  beta-D-Glucose 6-phosphate
C01182  D-Ribulose 1,5-bisphosphate
C01218  6-Phospho-2-dehydro-D-gluconate
C01236  D-Glucono-1,5-lactone 6-phosphate
C01801  Deoxyribose
C02076  Sedoheptulose
C03752  2-Amino-2-deoxy-D-gluconate
C04442  2-Dehydro-3-deoxy-6-phospho-D-gluconate
C05382  Sedoheptulose 7-phosphate
C06019  D-arabino-Hex-3-ulose 6-phosphate
C06473  2-Keto-D-gluconic acid
C20589  D-Glucosaminate-6-phosphate
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Reference
  Authors
Hove-Jensen B, Rosenkrantz TJ, Haldimann A, Wanner BL.
  Title
Escherichia coli phnN, encoding ribose 1,5-bisphosphokinase activity (phosphoribosyl diphosphate forming): dual role in phosphonate degradation and NAD biosynthesis pathways.
  Journal
J Bacteriol 185:2793-801 (2003)
DOI:10.1128/JB.185.9.2793-2801.2003
Reference
  Authors
Orita I, Sato T, Yurimoto H, Kato N, Atomi H, Imanaka T, Sakai Y
  Title
The ribulose monophosphate pathway substitutes for the missing pentose phosphate pathway in the archaeon Thermococcus kodakaraensis.
  Journal
J Bacteriol 188:4698-704 (2006)
DOI:10.1128/JB.00492-06
Reference
  Authors
Kato N, Yurimoto H, Thauer RK
  Title
The physiological role of the ribulose monophosphate pathway in bacteria and archaea.
  Journal
Biosci Biotechnol Biochem 70:10-21 (2006)
DOI:10.1271/bbb.70.10
Reference
  Authors
Kouril T, Wieloch P, Reimann J, Wagner M, Zaparty M, Albers SV, Schomburg D, Ruoff P, Siebers B
  Title
Unraveling the function of the two Entner-Doudoroff branches in the thermoacidophilic Crenarchaeon Sulfolobus solfataricus P2.
  Journal
FEBS J 280:1126-38 (2013)
DOI:10.1111/febs.12106
Reference
  Authors
Reher M, Schonheit P
  Title
Glyceraldehyde dehydrogenases from the thermoacidophilic euryarchaeota Picrophilus torridus and Thermoplasma acidophilum, key enzymes of the non-phosphorylative Entner-Doudoroff pathway, constitute a novel enzyme family within the aldehyde dehydrogenase superfamily.
  Journal
FEBS Lett 580:1198-204 (2006)
DOI:10.1016/j.febslet.2006.01.029
Reference
  Authors
Reher M, Fuhrer T, Bott M, Schonheit P
  Title
The nonphosphorylative Entner-Doudoroff pathway in the thermoacidophilic euryarchaeon Picrophilus torridus involves a novel 2-keto-3-deoxygluconate- specific aldolase.
  Journal
J Bacteriol 192:964-74 (2010)
DOI:10.1128/JB.01281-09
Related
pathway
sid00010  Glycolysis / Gluconeogenesis
sid00040  Pentose and glucuronate interconversions
sid00052  Galactose metabolism
sid00230  Purine metabolism
sid00240  Pyrimidine metabolism
sid00340  Histidine metabolism
sid00630  Glyoxylate and dicarboxylate metabolism
sid00750  Vitamin B6 metabolism
KO pathway
ko00030   

DBGET integrated database retrieval system