KEGG   PATHWAY: vap00970
Entry
vap00970                    Pathway                                
Name
Aminoacyl-tRNA biosynthesis - Variovorax paradoxus S110
Class
Genetic Information Processing; Translation
Pathway map
vap00970  Aminoacyl-tRNA biosynthesis
vap00970

Organism
Variovorax paradoxus S110 [GN:vap]
Gene
Vapar_R0035  tRNA-Ala [KO:K14218]
Vapar_R0011  tRNA-Ala [KO:K14218]
Vapar_R0047  tRNA-Ala [KO:K14218]
Vapar_R0052  tRNA-Ala [KO:K14218]
Vapar_R0055  tRNA-Arg [KO:K14219]
Vapar_R0017  tRNA-Arg [KO:K14219]
Vapar_R0043  tRNA-Arg [KO:K14219]
Vapar_R0060  tRNA-Arg [KO:K14219]
Vapar_R0040  tRNA-Arg [KO:K14219]
Vapar_R0020  tRNA-Asn [KO:K14220]
Vapar_R0059  tRNA-Asn [KO:K14220]
Vapar_R0033  tRNA-Asp [KO:K14221]
Vapar_R0061  tRNA-Asp [KO:K14221]
Vapar_R0024  tRNA-Cys [KO:K14222]
Vapar_R0042  tRNA-Gln [KO:K14223]
Vapar_R0064  tRNA-Gln [KO:K14223]
Vapar_R0066  tRNA-Glu [KO:K14224]
Vapar_R0034  tRNA-Glu [KO:K14224]
Vapar_R0001  tRNA-Gly [KO:K14225]
Vapar_R0023  tRNA-Gly [KO:K14225]
Vapar_R0003  tRNA-Gly [KO:K14225]
Vapar_R0031  tRNA-Gly [KO:K14225]
Vapar_R0070  tRNA-Gly [KO:K14225]
Vapar_R0057  tRNA-His [KO:K14226]
Vapar_R0014  tRNA-His [KO:K14226]
Vapar_R0048  tRNA-Ile [KO:K14227]
Vapar_R0053  tRNA-Ile [KO:K14227]
Vapar_R0058  tRNA-Ile [KO:K14227]
Vapar_R0009  tRNA-Leu [KO:K14228]
Vapar_R0032  tRNA-Leu [KO:K14228]
Vapar_R0027  tRNA-Leu [KO:K14228]
Vapar_R0022  tRNA-Leu [KO:K14228]
Vapar_R0069  tRNA-Leu [KO:K14228]
Vapar_R0025  tRNA-Leu [KO:K14228]
Vapar_R0010  tRNA-Lys [KO:K14229]
Vapar_R0028  tRNA-Lys [KO:K14229]
Vapar_R0071  tRNA-Lys [KO:K14229]
Vapar_R0044  tRNA-Met [KO:K14230]
Vapar_R0056  tRNA-Met [KO:K14230]
Vapar_R0041  tRNA-Met [KO:K14230]
Vapar_R0065  tRNA-Met [KO:K14230]
Vapar_R0006  tRNA-Phe [KO:K14231]
Vapar_R0038  tRNA-Pro [KO:K14232]
Vapar_R0015  tRNA-Pro [KO:K14232]
Vapar_R0018  tRNA-Pro [KO:K14232]
Vapar_R0063  tRNA-Pro [KO:K14232]
Vapar_R0039  tRNA-Ser [KO:K14233]
Vapar_R0029  tRNA-Ser [KO:K14233]
Vapar_R0037  tRNA-Ser [KO:K14233]
Vapar_R0062  tRNA-Ser [KO:K14233]
Vapar_R0030  tRNA-Ser [KO:K14233]
Vapar_R0004  tRNA-Thr [KO:K14234]
Vapar_R0036  tRNA-Thr [KO:K14234]
Vapar_R0008  tRNA-Thr [KO:K14234]
Vapar_R0067  tRNA-Thr [KO:K14234]
Vapar_R0005  tRNA-Trp [KO:K14235]
Vapar_R0021  tRNA-Trp [KO:K14235]
Vapar_R0068  tRNA-Trp [KO:K14235]
Vapar_R0002  tRNA-Tyr [KO:K14236]
Vapar_R0016  tRNA-Val [KO:K14237]
Vapar_R0013  tRNA-Val [KO:K14237]
Vapar_R0026  tRNA-Val [KO:K14237]
Vapar_3757  glutamyl-tRNA synthetase [KO:K01885] [EC:6.1.1.17]
Vapar_0281  glutamyl-tRNA(Gln) amidotransferase, A subunit [KO:K02433] [EC:6.3.5.6 6.3.5.7]
Vapar_0111  Amidase [KO:K02433] [EC:6.3.5.6 6.3.5.7]
Vapar_2598  Amidase [KO:K02433] [EC:6.3.5.6 6.3.5.7]
Vapar_5415  Amidase [KO:K02433] [EC:6.3.5.6 6.3.5.7]
Vapar_4356  Amidase [KO:K02433] [EC:6.3.5.6 6.3.5.7]
Vapar_6070  Amidase [KO:K02433] [EC:6.3.5.6 6.3.5.7]
Vapar_5623  Amidase [KO:K02433] [EC:6.3.5.6 6.3.5.7]
Vapar_0280  glutamyl-tRNA(Gln) amidotransferase, B subunit [KO:K02434] [EC:6.3.5.6 6.3.5.7]
Vapar_0282  glutamyl-tRNA(Gln) amidotransferase, C subunit [KO:K02435] [EC:6.3.5.6 6.3.5.7]
Vapar_3615  glutaminyl-tRNA synthetase [KO:K01886] [EC:6.1.1.18]
Vapar_3176  alanyl-tRNA synthetase [KO:K01872] [EC:6.1.1.7]
Vapar_4122  aspartyl-tRNA synthetase [KO:K01876] [EC:6.1.1.12]
Vapar_4744  glycyl-tRNA synthetase, alpha subunit [KO:K01878] [EC:6.1.1.14]
Vapar_4743  glycyl-tRNA synthetase, beta subunit [KO:K01879] [EC:6.1.1.14]
Vapar_1870  threonyl-tRNA synthetase [KO:K01868] [EC:6.1.1.3]
Vapar_4028  seryl-tRNA synthetase [KO:K01875] [EC:6.1.1.11]
Vapar_3090  cysteinyl-tRNA synthetase [KO:K01883] [EC:6.1.1.16]
Vapar_4081  methionyl-tRNA synthetase [KO:K01874] [EC:6.1.1.10]
Vapar_5111  methionyl-tRNA formyltransferase [KO:K00604] [EC:2.1.2.9]
Vapar_1300  valyl-tRNA synthetase [KO:K01873] [EC:6.1.1.9]
Vapar_0422  leucyl-tRNA synthetase [KO:K01869] [EC:6.1.1.4]
Vapar_1268  isoleucyl-tRNA synthetase [KO:K01870] [EC:6.1.1.5]
Vapar_1410  lysyl-tRNA synthetase [KO:K04567] [EC:6.1.1.6]
Vapar_0461  arginyl-tRNA synthetase [KO:K01887] [EC:6.1.1.19]
Vapar_4212  prolyl-tRNA synthetase [KO:K01881] [EC:6.1.1.15]
Vapar_2188  histidyl-tRNA synthetase [KO:K01892] [EC:6.1.1.21]
Vapar_1874  phenylalanyl-tRNA synthetase, alpha subunit [KO:K01889] [EC:6.1.1.20]
Vapar_1875  phenylalanyl-tRNA synthetase, beta subunit [KO:K01890] [EC:6.1.1.20]
Vapar_4672  tyrosyl-tRNA synthetase [KO:K01866] [EC:6.1.1.1]
Vapar_4025  tryptophanyl-tRNA synthetase [KO:K01867] [EC:6.1.1.2]
Compound
C00025  L-Glutamate
C00037  Glycine
C00041  L-Alanine
C00047  L-Lysine
C00049  L-Aspartate
C00062  L-Arginine
C00064  L-Glutamine
C00065  L-Serine
C00073  L-Methionine
C00078  L-Tryptophan
C00079  L-Phenylalanine
C00082  L-Tyrosine
C00097  L-Cysteine
C00101  Tetrahydrofolate
C00123  L-Leucine
C00135  L-Histidine
C00148  L-Proline
C00152  L-Asparagine
C00183  L-Valine
C00188  L-Threonine
C00234  10-Formyltetrahydrofolate
C00407  L-Isoleucine
C00886  L-Alanyl-tRNA
C01005  O-Phospho-L-serine
C01931  L-Lysyl-tRNA
C02047  L-Leucyl-tRNA
C02163  L-Arginyl-tRNA(Arg)
C02282  Glutaminyl-tRNA
C02412  Glycyl-tRNA(Gly)
C02430  L-Methionyl-tRNA
C02553  L-Seryl-tRNA(Ser)
C02554  L-Valyl-tRNA(Val)
C02702  L-Prolyl-tRNA(Pro)
C02839  L-Tyrosyl-tRNA(Tyr)
C02984  L-Aspartyl-tRNA(Asp)
C02987  L-Glutamyl-tRNA(Glu)
C02988  L-Histidyl-tRNA(His)
C02992  L-Threonyl-tRNA(Thr)
C03125  L-Cysteinyl-tRNA(Cys)
C03127  L-Isoleucyl-tRNA(Ile)
C03294  N-Formylmethionyl-tRNA
C03402  L-Asparaginyl-tRNA(Asn)
C03511  L-Phenylalanyl-tRNA(Phe)
C03512  L-Tryptophanyl-tRNA(Trp)
C06112  L-Glutamyl-tRNA(Gln)
C06113  L-Aspartyl-tRNA(Asn)
C06481  L-Seryl-tRNA(Sec)
C06482  L-Selenocysteinyl-tRNA(Sec)
C16138  L-Pyrrolysine
C16638  O-Phosphoseryl-tRNA(Sec)
C17022  O-Phosphoseryl-tRNA(Cys)
C17027  L-Pyrrolysyl-tRNA(Pyl)
Reference
  Authors
Sheppard K, Yuan J, Hohn MJ, Jester B, Devine KM, Soll D
  Title
From one amino acid to another: tRNA-dependent amino acid biosynthesis.
  Journal
Nucleic Acids Res 36:1813-25 (2008)
DOI:10.1093/nar/gkn015
Reference
  Authors
Polycarpo C, Ambrogelly A, Berube A, Winbush SM, McCloskey JA, Crain PF, Wood JL, Soll D
  Title
An aminoacyl-tRNA synthetase that specifically activates pyrrolysine.
  Journal
Proc Natl Acad Sci U S A 101:12450-4 (2004)
DOI:10.1073/pnas.0405362101
Related
pathway
vap00250  Alanine, aspartate and glutamate metabolism
vap00260  Glycine, serine and threonine metabolism
vap00270  Cysteine and methionine metabolism
vap00290  Valine, leucine and isoleucine biosynthesis
vap00300  Lysine biosynthesis
vap00330  Arginine and proline metabolism
vap00340  Histidine metabolism
vap00380  Tryptophan metabolism
vap00400  Phenylalanine, tyrosine and tryptophan biosynthesis
KO pathway
ko00970   

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