Entry |
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Name |
Benzoate degradation - Vibrio cholerae M66-2
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Class |
Metabolism; Xenobiotics biodegradation and metabolism
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Pathway map |

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Other DBs |
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Organism |
Vibrio cholerae M66-2 [GN: vcm]
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Gene |
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Compound |
C00596 | 2-Hydroxy-2,4-pentadienoate |
C00682 | 2-Hydroxymuconate semialdehyde |
C01144 | (S)-3-Hydroxybutanoyl-CoA |
C01163 | 3-Carboxy-cis,cis-muconate |
C01278 | 2-Carboxy-2,5-dihydro-5-oxofuran-2-acetate |
C03586 | 2-Oxo-2,3-dihydrofuran-5-acetate |
C03589 | 4-Hydroxy-2-oxopentanoate |
C03671 | 2-Pyrone-4,6-dicarboxylate |
C03676 | 3-Hydroxy-cis,cis-muconate |
C04091 | cis-1,2-Dihydrobenzene-1,2-diol |
C04115 | 4-Carboxy-4-hydroxy-2-oxoadipate |
C04324 | (1E,3E)-4-Hydroxybuta-1,3-diene-1,2,4-tricarboxylate |
C04434 | (1E)-4-Oxobut-1-ene-1,2,4-tricarboxylate |
C04480 | 3-Carboxy-2-hydroxymuconate semialdehyde |
C04484 | 4-Carboxy-2-hydroxymuconate semialdehyde |
C04553 | 3-Carboxy-2,5-dihydro-5-oxofuran-2-acetate |
C05375 | 2-Hydroxy-2-hydropyrone-4,6-dicarboxylate |
C06035 | 4-Methylene-2-oxoglutarate |
C06321 | (1R,6S)-1,6-Dihydroxycyclohexa-2,4-diene-1-carboxylate |
C06322 | Cyclohexa-1,5-diene-1-carbonyl-CoA |
C06333 | 2-Aminobenzenesulfonate |
C06723 | 6-Carboxyhex-2-enoyl-CoA |
C06749 | 6-Hydroxycyclohex-1-ene-1-carbonyl-CoA |
C09809 | Cyclohex-2,5-diene-1-carboxyl-CoA |
C09810 | Cyclohex-1,4-diene-1-carboxyl-CoA |
C09811 | Cyclohex-1-ene-1-carboxyl-CoA |
C09812 | 2-Hydroxycyclohexane-1-carboxyl-CoA |
C09813 | 2-Ketocyclohexane-1-carboxyl-CoA |
C09821 | 6-Oxocyclohex-1-ene-1-carbonyl-CoA |
C09822 | Cyclohexane-1-carboxylate |
C09823 | Cyclohexane-1-carboxyl-CoA |
C14144 | 5-Carboxy-2-pentenoyl-CoA |
C14610 | (S)-5-Oxo-2,5-dihydrofuran-2-acetate |
C19682 | 3,4-Didehydroadipyl-CoA |
C19683 | 3,4-Didehydroadipyl-CoA semialdehyde |
C19684 | 2,3-Epoxy-2,3-dihydrobenzoyl-CoA |
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Reference |
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Authors |
Carmona M, Zamarro MT, Blazquez B, Durante-Rodriguez G, Juarez JF, Valderrama JA, Barragan MJ, Garcia JL, Diaz E |
Title |
Anaerobic catabolism of aromatic compounds: a genetic and genomic view. |
Journal |
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Reference |
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Authors |
Hara H, Masai E, Miyauchi K, Katayama Y, Fukuda M. |
Title |
Characterization of the 4-carboxy-4-hydroxy-2-oxoadipate aldolase gene and operon structure of the protocatechuate 4,5-cleavage pathway genes in Sphingomonas paucimobilis SYK-6. |
Journal |
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Reference |
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Authors |
Maruyama K, Shibayama T, Ichikawa A, Sakou Y, Yamada S, Sugisaki H. |
Title |
Cloning and characterization of the genes encoding enzymes for the protocatechuate meta-degradation pathway of Pseudomonas ochraceae NGJ1. |
Journal |
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Reference |
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Authors |
Mampel J, Ruff J, Junker F, Cook AM. |
Title |
The oxygenase component of the 2-aminobenzenesulfonate dioxygenase system from Alcaligenes sp. strain O-1. |
Journal |
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Reference |
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Authors |
Junker F, Field JA, Bangerter F, Ramsteiner K, Kohler HP, Joannou CL, Mason JR, Leisinger T, Cook AM. |
Title |
Oxygenation and spontaneous deamination of 2-aminobenzenesulphonic acid in Alcaligenes sp. strain O-1 with subsequent meta ring cleavage and spontaneous desulphonation to 2-hydroxymuconic acid. |
Journal |
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Reference |
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Authors |
Harwood CS, Gibson J. |
Title |
Shedding light on anaerobic benzene ring degradation: a process unique to prokaryotes? |
Journal |
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Reference |
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Authors |
Peters F, Shinoda Y, McInerney MJ, Boll M. |
Title |
Cyclohexa-1,5-diene-1-carbonyl-coenzyme A (CoA) hydratases of Geobacter metallireducens and Syntrophus aciditrophicus: Evidence for a common benzoyl-CoA degradation pathway in facultative and strict anaerobes. |
Journal |
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Reference |
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Authors |
Cowles CE, Nichols NN, Harwood CS. |
Title |
BenR, a XylS homologue, regulates three different pathways of aromatic acid degradation in Pseudomonas putida. |
Journal |
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Reference |
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Authors |
Smith MA, Weaver VB, Young DM, Ornston LN. |
Title |
Genes for chlorogenate and hydroxycinnamate catabolism (hca) are linked to functionally related genes in the dca-pca-qui-pob-hca chromosomal cluster of Acinetobacter sp. strain ADP1. |
Journal |
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Reference |
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Authors |
Kuntze K, Shinoda Y, Moutakki H, McInerney MJ, Vogt C, Richnow HH, Boll M |
Title |
6-Oxocyclohex-1-ene-1-carbonyl-coenzyme A hydrolases from obligately anaerobic bacteria: characterization and identification of its gene as a functional marker for aromatic compounds degrading anaerobes. |
Journal |
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Reference |
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Authors |
Pelletier DA, Harwood CS |
Title |
2-Hydroxycyclohexanecarboxyl coenzyme A dehydrogenase, an enzyme characteristic of the anaerobic benzoate degradation pathway used by Rhodopseudomonas palustris. |
Journal |
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Reference |
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Authors |
Elshahed MS, Bhupathiraju VK, Wofford NQ, Nanny MA, McInerney MJ |
Title |
Metabolism of benzoate, cyclohex-1-ene carboxylate, and cyclohexane carboxylate by "Syntrophus aciditrophicus" strain SB in syntrophic association with H(2)-using microorganisms. |
Journal |
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Reference |
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Authors |
Nogales J, Canales A, Jimenez-Barbero J, Serra B, Pingarron JM, Garcia JL, Diaz E |
Title |
Unravelling the gallic acid degradation pathway in bacteria: the gal cluster from Pseudomonas putida. |
Journal |
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KO pathway |
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