| Entry |
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| Name |
Benzoate degradation - Vibrio cholerae M66-2
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| Class |
Metabolism; Xenobiotics biodegradation and metabolism
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| Pathway map |
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| Other DBs |
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| Organism |
Vibrio cholerae M66-2 [GN: vcm]
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| Gene |
| hadHB; fatty oxidation complex, beta subunit [KO: K00632] [EC: 2.3.1.16] | | | | | | | | |
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| Compound |
| Pyruvate | | Acetyl-CoA | | Oxaloacetate | | Acetaldehyde | | Catechol | | Succinyl-CoA | | Phenol | | 4-Hydroxybenzoate | | Benzoate | | 2,3-Dihydroxybenzoate | | 3,4-Dihydroxybenzoate | | Acetoacetyl-CoA | | Benzoyl-CoA | | Glutaryl-CoA | | Hydroquinone | | 3-Hydroxybenzoate | | 2-Hydroxy-2,4-pentadienoate | | 2,5-Dihydroxybenzoate | | 2-Hydroxymuconate semialdehyde | | 3-Oxoadipate | | Crotonoyl-CoA | | 6-Carboxyhexanoyl-CoA | | (S)-3-Hydroxybutanoyl-CoA | | 3-Carboxy-cis,cis-muconate | | 2-Carboxy-2,5-dihydro-5-oxofuran-2-acetate | | Benzene | | Resorcinol | | 2-Maleylacetate | | 3-Oxoadipyl-CoA | | Glutaconyl-1-CoA | | cis,cis-Muconate | | 2-Hydroxymuconate | | 4-Methoxybenzoate | | Benzene-1,2,4-triol | | 4-Hydroxybenzoyl-CoA | | gamma-Oxalocrotonate | | 2-Oxo-2,3-dihydrofuran-5-acetate | | 4-Hydroxy-2-oxopentanoate | | 2-Pyrone-4,6-dicarboxylate | | 3-Hydroxy-cis,cis-muconate | | cis-1,2-Dihydrobenzene-1,2-diol | | 4-Carboxy-4-hydroxy-2-oxoadipate | | (1E,3E)-4-Hydroxybuta-1,3-diene-1,2,4-tricarboxylate | | (1E)-4-Oxobut-1-ene-1,2,4-tricarboxylate | | 3-Carboxy-2-hydroxymuconate semialdehyde | | 4-Carboxy-2-hydroxymuconate semialdehyde | | 3-Carboxy-2,5-dihydro-5-oxofuran-2-acetate | | 2-Hydroxy-2-hydropyrone-4,6-dicarboxylate | | Parapyruvate | | 4-Methylene-2-oxoglutarate | | (1R,6S)-1,6-Dihydroxycyclohexa-2,4-diene-1-carboxylate | | Cyclohexa-1,5-diene-1-carbonyl-CoA | | 2-Aminobenzenesulfonate | | 3-Sulfocatechol | | 3-Hydroxypimeloyl-CoA | | 3-Oxopimeloyl-CoA | | 6-Carboxyhex-2-enoyl-CoA | | 6-Hydroxycyclohex-1-ene-1-carbonyl-CoA | | Cyclohex-2,5-diene-1-carboxyl-CoA | | Cyclohex-1,4-diene-1-carboxyl-CoA | | Cyclohex-1-ene-1-carboxyl-CoA | | 2-Hydroxycyclohexane-1-carboxyl-CoA | | 2-Ketocyclohexane-1-carboxyl-CoA | | 6-Oxocyclohex-1-ene-1-carbonyl-CoA | | Cyclohexane-1-carboxylate | | Cyclohexane-1-carboxyl-CoA | | (S)-5-Oxo-2,5-dihydrofuran-2-acetate | | 2,6-Dihydroxybenzoate |
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| Reference |
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| Authors |
Carmona M, Zamarro MT, Blazquez B, Durante-Rodriguez G, Juarez JF, Valderrama JA, Barragan MJ, Garcia JL, Diaz E |
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| Title |
Anaerobic catabolism of aromatic compounds: a genetic and genomic view. |
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| Journal |
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| Reference |
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| Authors |
Hara H, Masai E, Miyauchi K, Katayama Y, Fukuda M. |
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| Title |
Characterization of the 4-carboxy-4-hydroxy-2-oxoadipate aldolase gene and operon structure of the protocatechuate 4,5-cleavage pathway genes in Sphingomonas paucimobilis SYK-6. |
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| Journal |
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| Reference |
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| Authors |
Maruyama K, Shibayama T, Ichikawa A, Sakou Y, Yamada S, Sugisaki H. |
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| Title |
Cloning and characterization of the genes encoding enzymes for the protocatechuate meta-degradation pathway of Pseudomonas ochraceae NGJ1. |
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| Journal |
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| Reference |
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| Authors |
Mampel J, Ruff J, Junker F, Cook AM. |
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| Title |
The oxygenase component of the 2-aminobenzenesulfonate dioxygenase system from Alcaligenes sp. strain O-1. |
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| Journal |
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| Reference |
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| Authors |
Junker F, Field JA, Bangerter F, Ramsteiner K, Kohler HP, Joannou CL, Mason JR, Leisinger T, Cook AM. |
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| Title |
Oxygenation and spontaneous deamination of 2-aminobenzenesulphonic acid in Alcaligenes sp. strain O-1 with subsequent meta ring cleavage and spontaneous desulphonation to 2-hydroxymuconic acid. |
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| Journal |
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| Reference |
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| Authors |
Harwood CS, Gibson J. |
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| Title |
Shedding light on anaerobic benzene ring degradation: a process unique to prokaryotes? |
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| Journal |
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| Reference |
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| Authors |
Peters F, Shinoda Y, McInerney MJ, Boll M. |
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| Title |
Cyclohexa-1,5-diene-1-carbonyl-coenzyme A (CoA) hydratases of Geobacter metallireducens and Syntrophus aciditrophicus: Evidence for a common benzoyl-CoA degradation pathway in facultative and strict anaerobes. |
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| Journal |
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| Reference |
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| Authors |
Cowles CE, Nichols NN, Harwood CS. |
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| Title |
BenR, a XylS homologue, regulates three different pathways of aromatic acid degradation in Pseudomonas putida. |
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| Journal |
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| Reference |
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| Authors |
Smith MA, Weaver VB, Young DM, Ornston LN. |
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| Title |
Genes for chlorogenate and hydroxycinnamate catabolism (hca) are linked to functionally related genes in the dca-pca-qui-pob-hca chromosomal cluster of Acinetobacter sp. strain ADP1. |
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| Journal |
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| Reference |
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| Authors |
Kuntze K, Shinoda Y, Moutakki H, McInerney MJ, Vogt C, Richnow HH, Boll M |
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| Title |
6-Oxocyclohex-1-ene-1-carbonyl-coenzyme A hydrolases from obligately anaerobic bacteria: characterization and identification of its gene as a functional marker for aromatic compounds degrading anaerobes. |
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| Journal |
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| Reference |
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| Authors |
Pelletier DA, Harwood CS |
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| Title |
2-Hydroxycyclohexanecarboxyl coenzyme A dehydrogenase, an enzyme characteristic of the anaerobic benzoate degradation pathway used by Rhodopseudomonas palustris. |
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| Journal |
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| Reference |
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| Authors |
Elshahed MS, Bhupathiraju VK, Wofford NQ, Nanny MA, McInerney MJ |
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| Title |
Metabolism of benzoate, cyclohex-1-ene carboxylate, and cyclohexane carboxylate by "Syntrophus aciditrophicus" strain SB in syntrophic association with H(2)-using microorganisms. |
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| Journal |
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| Reference |
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| Authors |
Nogales J, Canales A, Jimenez-Barbero J, Serra B, Pingarron JM, Garcia JL, Diaz E |
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| Title |
Unravelling the gallic acid degradation pathway in bacteria: the gal cluster from Pseudomonas putida. |
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| KO pathway |
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