KEGG   PATHWAY: vcr00240
Entry
vcr00240                    Pathway                                
Name
Pyrimidine metabolism - Vibrio cholerae O1 O395
Class
Metabolism; Nucleotide metabolism
Pathway map
vcr00240  Pyrimidine metabolism
vcr00240

Module
vcr_M00051  De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP [PATH:vcr00240]
vcr_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:vcr00240]
vcr_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:vcr00240]
Other DBs
GO: 0006220 0006213
Organism
Vibrio cholerae O1 O395 [GN:vcr]
Gene
VC395_2504  carB; carbamoyl-phosphate synthase, large subunit [KO:K01955] [EC:6.3.5.5]
VC395_2505  carA; carbamoyl-phosphate synthase, small subunit [KO:K01956] [EC:6.3.5.5]
VC395_2624  pyrB; aspartate carbamoyltransferase, catalytic subunit [KO:K00609] [EC:2.1.3.2]
VC395_2625  pyrI; aspartate carbamoyltransferase, regulatory subunit [KO:K00610]
VC395_A0950  pyrC; dihydroorotase [KO:K01465] [EC:3.5.2.3]
VC395_1611  pyrD; dihydroorotate dehydrogenase [KO:K00254] [EC:1.3.5.2]
VC395_0243  pyrE; orotate phosphoribosyltransferase [KO:K00762] [EC:2.4.2.10]
VC395_2026  pyrF; orotidine 5'-phosphate decarboxylase [KO:K01591] [EC:4.1.1.23]
VC395_2374  pyrH; uridylate kinase [KO:K09903] [EC:2.7.4.22]
VC395_0773  ndk; nucleoside diphosphate kinase [KO:K00940] [EC:2.7.4.6]
VC395_2565  mazG; mazG protein [KO:K04765] [EC:3.6.1.9]
VC395_0462  maf; maf protein [KO:K06287] [EC:3.6.1.-]
VC395_1733  conserved hypothetical protein [KO:K07043] [EC:3.6.1.-]
VC395_2563  pyrG; CTP synthase [KO:K01937] [EC:6.3.4.2]
VC395_2031  cmk; cytidylate kinase [KO:K00945] [EC:2.7.4.25]
VC395_1052  udk; uridine kinase [KO:K00876] [EC:2.7.1.48]
VC395_A0779  putative 5'-nucleotidase [KO:K01081] [EC:3.1.3.5]
VC395_2288  ushA; UDP-sugar hydrolase [KO:K11751] [EC:3.1.3.5 3.6.1.45]
VC395_0548  surE; survival protein SurE [KO:K03787] [EC:3.1.3.5 3.1.3.6]
VC395_A0707  conserved hypothetical protein [KO:K08723] [EC:3.1.3.-]
VC395_A0127  udp-2; uridine phosphorylase [KO:K00757] [EC:2.4.2.3]
VC395_1048  udp-1; uridine phosphorylase [KO:K00757] [EC:2.4.2.3]
VC395_A0995  conserved hypothetical protein [KO:K09913] [EC:2.4.2.1 2.4.2.2]
VC395_2341  upp; uracil phosphoribosyltransferase [KO:K00761] [EC:2.4.2.9]
VC395_2531  putative 2,3-cyclic-nucleotide 2-phosphodiesterase [KO:K01119] [EC:3.1.4.16 3.1.3.6]
VC395_2674  cpdB; 2,3-cyclic-nucleotide 2-phosphodiesterase [KO:K01119] [EC:3.1.4.16 3.1.3.6]
VC395_0915  conserved hypothetical protein [KO:K06966] [EC:3.2.2.10 3.2.2.-]
VC395_1350  cdd; cytidine deaminase [KO:K01489] [EC:3.5.4.5]
VC395_A0812  nrdD; anaerobic ribonucleoside-triphosphate reductase [KO:K21636] [EC:1.1.98.6]
VC395_1375  nrdA; ribonucleoside-diphosphate reductase, alpha subunit [KO:K00525] [EC:1.17.4.1]
VC395_1374  nrdB; ribonucleoside-diphosphate reductase, beta subunit [KO:K00526] [EC:1.17.4.1]
VC395_2093  conserved hypothetical protein [KO:K08722] [EC:3.1.3.89]
VC395_A0864  putative deoxycytidylate deaminase [KO:K01493] [EC:3.5.4.12]
VC395_2131  tmk; thymidylate kinase [KO:K00943] [EC:2.7.4.9]
VC395_2464  deoA; thymidine phosphorylase [KO:K00758] [EC:2.4.2.4]
VC395_1233  tdk; thymidine kinase [KO:K00857] [EC:2.7.1.21]
VC395_0692  thyA; thymidylate synthase [KO:K00560] [EC:2.1.1.45]
Compound
C00015  UDP
C00039  DNA
C00046  RNA
C00055  CMP
C00063  CTP
C00064  L-Glutamine
C00075  UTP
C00086  Urea
C00099  beta-Alanine
C00105  UMP
C00106  Uracil
C00112  CDP
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00169  Carbamoyl phosphate
C00178  Thymine
C00214  Thymidine
C00222  3-Oxopropanoate
C00239  dCMP
C00295  Orotate
C00299  Uridine
C00337  (S)-Dihydroorotate
C00363  dTDP
C00364  dTMP
C00365  dUMP
C00380  Cytosine
C00383  Malonate
C00429  5,6-Dihydrouracil
C00438  N-Carbamoyl-L-aspartate
C00458  dCTP
C00459  dTTP
C00460  dUTP
C00475  Cytidine
C00526  Deoxyuridine
C00672  2-Deoxy-D-ribose 1-phosphate
C00705  dCDP
C00813  Barbiturate
C00881  Deoxycytidine
C01013  3-Hydroxypropanoate
C01103  Orotidine 5'-phosphate
C01168  Pseudouridine 5'-phosphate
C01205  (R)-3-Amino-2-methylpropanoate
C01346  dUDP
C01368  3'-UMP
C01563  Carbamate
C02067  Pseudouridine
C02170  Methylmalonate
C02354  2',3'-Cyclic CMP
C02355  2',3'-Cyclic UMP
C02376  5-Methylcytosine
C02642  3-Ureidopropionate
C03997  5-Hydroxymethyldeoxycytidylate
C05281  5-Methylbarbiturate
C05822  3'-CMP
C06198  P1,P4-Bis(5'-uridyl) tetraphosphate
C11038  2'-Deoxy-5-hydroxymethylcytidine-5'-diphosphate
C11039  2'-Deoxy-5-hydroxymethylcytidine-5'-triphosphate
C15607  3-Oxo-3-ureidopropanoate
C20231  (Z)-3-Ureidoacrylate peracid
C20249  (Z)-3-Peroxyaminoacrylate
C20253  Aminoacrylate
C20254  Ureidoacrylate
C20846  3-Oxo-3-ureidoisobutyrate
C21028  (R)-5,6-Dihydrothymine
C21029  (R)-3-Ureidoisobutyrate
Related
pathway
vcr00030  Pentose phosphate pathway
vcr00220  Arginine biosynthesis
vcr00250  Alanine, aspartate and glutamate metabolism
vcr00280  Valine, leucine and isoleucine degradation
vcr00410  beta-Alanine metabolism
KO pathway
ko00240   

  All links  
Genome (1)   
   KEGG GENOME (1)   
Gene (37)   
   KEGG GENES (37)   
All databases (38)   

Download RDF
DBGET integrated database retrieval system