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Entry
vvy00970                    Pathway                                

Name
Aminoacyl-tRNA biosynthesis - Vibrio vulnificus YJ016
Class
Genetic Information Processing; Translation
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Pathway map
Aminoacyl-tRNA biosynthesis
vvy00970

All organismsOrtholog table
Module
Aminoacyl-tRNA biosynthesis, prokaryotes [PATH:vvy00970]
Organism
Vibrio vulnificus YJ016 [GN:vvy]
Gene
VVt011  
tRNA-Ala-2; tRNA-Ala [KO:K14218]
VVt072  
tRNA-Ala-3; tRNA-Ala [KO:K14218]
VVt078  
tRNA-Ala-4; tRNA-Ala [KO:K14218]
VVt002  
tRNA-Ala-1; tRNA-Ala [KO:K14218]
VVt036  
tRNA-Arg-2; tRNA-Arg [KO:K14219]
VVt004  
tRNA-Arg-1; tRNA-Arg [KO:K14219]
VVt048  
tRNA-Arg-3; tRNA-Arg [KO:K14219]
VVt052  
tRNA-Arg-5; tRNA-Arg [KO:K14219]
VVt054  
tRNA-Arg-7; tRNA-Arg [KO:K14219]
VVt057  
tRNA-Arg-9; tRNA-Arg [KO:K14219]
VVt053  
tRNA-Arg-6; tRNA-Arg [KO:K14219]
VVt055  
tRNA-Arg-8; tRNA-Arg [KO:K14219]
VVt051  
tRNA-Arg-4; tRNA-Arg [KO:K14219]
VVAt12  
tRNA-Asn-5; tRNA-Asn [KO:K14220]
VVt067  
tRNA-Asn-4; tRNA-Asn [KO:K14220]
VVt061  
tRNA-Asn-2; tRNA-Asn [KO:K14220]
VVt040  
tRNA-Asn-1; tRNA-Asn [KO:K14220]
VVt065  
tRNA-Asn-3; tRNA-Asn [KO:K14220]
VVt013  
tRNA-Asp-1; tRNA-Asp [KO:K14221]
VVt099  
tRNA-Asp-6; tRNA-Asp [KO:K14221]
VVt018  
tRNA-Asp-2; tRNA-Asp [KO:K14221]
VVt068  
tRNA-Asp-3; tRNA-Asp [KO:K14221]
VVt095  
tRNA-Asp-5; tRNA-Asp [KO:K14221]
VVt077  
tRNA-Asp-4; tRNA-Asp [KO:K14221]
VVAt07  
tRNA-Cys-2; tRNA-Cys [KO:K14222]
VVt041  
tRNA-Cys-1; tRNA-Cys [KO:K14222]
VVAt08  
tRNA-Cys-3; tRNA-Cys [KO:K14222]
VVt021  
tRNA-Gln-1; tRNA-Gln [KO:K14223]
VVt025  
tRNA-Gln-3; tRNA-Gln [KO:K14223]
VVt032  
tRNA-Gln-4; tRNA-Gln [KO:K14223]
VVt023  
tRNA-Gln-2; tRNA-Gln [KO:K14223]
VVt029  
tRNA-Gln-3; tRNA-Gln [KO:K14223]
VVAt01  
tRNA-Glu-7; tRNA-Glu [KO:K14224]
VVt015  
tRNA-Glu-2; tRNA-Glu [KO:K14224]
VVt098  
tRNA-Glu-5; tRNA-Glu [KO:K14224]
VVt100  
tRNA-Glu-6; tRNA-Glu [KO:K14224]
VVt070  
tRNA-Glu-3; tRNA-Glu [KO:K14224]
VVt074  
tRNA-Glu-4; tRNA-Glu [KO:K14224]
VVt009  
tRNA-Glu-1; tRNA-Glu [KO:K14224]
VVAt09  
tRNA-Gly-10; tRNA-Gly [KO:K14225]
VVt092  
tRNA-Gly-9; tRNA-Gly [KO:K14225]
VVt042  
tRNA-Gly-1; tRNA-Gly [KO:K14225]
VVt044  
tRNA-Gly-2; tRNA-Gly [KO:K14225]
VVt087  
tRNA-Gly-5; tRNA-Gly [KO:K14225]
VVt089  
tRNA-Gly-7; tRNA-Gly [KO:K14225]
VVt090  
tRNA-Gly-8; tRNA-Gly [KO:K14225]
VVt088  
tRNA-Gly-6; tRNA-Gly [KO:K14225]
VVt084  
tRNA-Gly-3; tRNA-Gly [KO:K14225]
VVt086  
tRNA-Gly-4; tRNA-Gly [KO:K14225]
VVt005  
tRNA-His-1; tRNA-His [KO:K14226]
VVt007  
tRNA-His-2; tRNA-His [KO:K14226]
VVt001  
tRNA-Ile-1; tRNA-Ile [KO:K14227]
VVt079  
tRNA-Ile-2; tRNA-Ile [KO:K14227]
VVt075  
tRNA-Leu-10; tRNA-Leu [KO:K14228]
VVt026  
tRNA-Leu-4; tRNA-Leu [KO:K14228]
VVt030  
tRNA-Leu-6; tRNA-Leu [KO:K14228]
VVt024  
tRNA-Leu-3; tRNA-Leu [KO:K14228]
VVt033  
tRNA-Leu-7; tRNA-Leu [KO:K14228]
VVt022  
tRNA-Leu-2; tRNA-Leu [KO:K14228]
VVt020  
tRNA-Leu-1; tRNA-Leu [KO:K14228]
VVt028  
tRNA-Leu-5; tRNA-Leu [KO:K14228]
VVAt06  
tRNA-Leu-12; tRNA-Leu [KO:K14228]
VVt043  
tRNA-Leu-8; tRNA-Leu [KO:K14228]
VVAt05  
tRNA-Leu-11; tRNA-Leu [KO:K14228]
VVt050  
tRNA-Leu-9; tRNA-Leu [KO:K14228]
VVAt02  
tRNA-Lys-5; tRNA-Lys [KO:K14229]
VVt073  
tRNA-Lys-3; tRNA-Lys [KO:K14229]
VVt010  
tRNA-Lys-1; tRNA-Lys [KO:K14229]
VVt097  
tRNA-Lys-4; tRNA-Lys [KO:K14229]
VVt016  
tRNA-Lys-2; tRNA-Lys [KO:K14229]
VVt027  
tRNA-Met-2; tRNA-Met [KO:K14230]
VVt031  
tRNA-Met-3; tRNA-Met [KO:K14230]
VVt034  
tRNA-Met-4; tRNA-Met [KO:K14230]
VVt014  
tRNA-Met-1; tRNA-Met [KO:K14230]
VVt049  
tRNA-Met-5; tRNA-Met [KO:K14230]
VVt080  
tRNA-Met-6; tRNA-Met [KO:K14230]
VVt081  
tRNA-Met-7; tRNA-Met [KO:K14230]
VVt082  
tRNA-Met-8; tRNA-Met [KO:K14230]
VVt083  
tRNA-Met-9; tRNA-Met [KO:K14230]
VVt085  
tRNA-Met-10; tRNA-Met [KO:K14230]
VVt059  
tRNA-Phe-1; tRNA-Phe [KO:K14231]
VVt062  
tRNA-Phe-2; tRNA-Phe [KO:K14231]
VVAt11  
tRNA-Phe-4; tRNA-Phe [KO:K14231]
VVt064  
tRNA-Phe-3; tRNA-Phe [KO:K14231]
VVt006  
tRNA-Pro-1; tRNA-Pro [KO:K14232]
VVt035  
tRNA-Pro-3; tRNA-Pro [KO:K14232]
VVt008  
tRNA-Pro-2; tRNA-Pro [KO:K14232]
VVt037  
tRNA-Pro-4; tRNA-Pro [KO:K14232]
VVt056  
tRNA-Ser-4; tRNA-Ser [KO:K14233]
VVt058  
tRNA-Ser-5; tRNA-Ser [KO:K14233]
VVAt04  
tRNA-Ser-6; tRNA-Ser [KO:K14233]
VVAt10  
tRNA-Ser-7; tRNA-Ser [KO:K14233]
VVt003  
tRNA-Ser-1; tRNA-Ser [KO:K14233]
VVt039  
tRNA-Ser-2; tRNA-Ser [KO:K14233]
VVt047  
tRNA-Ser-3; tRNA-Ser [KO:K14233]
VVt069  
tRNA-Thr-4; tRNA-Thr [KO:K14234]
VVt091  
tRNA-Thr-5; tRNA-Thr [KO:K14234]
VVt060  
tRNA-Thr-1; tRNA-Thr [KO:K14234]
VVt063  
tRNA-Thr-2; tRNA-Thr [KO:K14234]
VVt066  
tRNA-Thr-3; tRNA-Thr [KO:K14234]
VVt094  
tRNA-Thr-6; tRNA-Thr [KO:K14234]
VVt019  
tRNA-Trp-1; tRNA-Trp [KO:K14235]
VVt076  
tRNA-Trp-2; tRNA-Trp [KO:K14235]
VVt038  
tRNA-Tyr-1; tRNA-Tyr [KO:K14236]
VVt093  
tRNA-Tyr-2; tRNA-Tyr [KO:K14236]
VVAt03  
tRNA-Val-7; tRNA-Val [KO:K14237]
VVt017  
tRNA-Val-2; tRNA-Val [KO:K14237]
VVt096  
tRNA-Val-6; tRNA-Val [KO:K14237]
VVt071  
tRNA-Val-5; tRNA-Val [KO:K14237]
VVt012  
tRNA-Val-1; tRNA-Val [KO:K14237]
VVt045  
tRNA-Val-3; tRNA-Val [KO:K14237]
VVt046  
tRNA-Val-4; tRNA-Val [KO:K14237]
VV0949  
gltX; glutamyl-tRNA synthetase [KO:K01885] [EC:6.1.1.17]
VV1013  
glutaminyl-tRNA synthetase; K01886 glutaminyl-tRNA synthetase [EC:6.1.1.18] [KO:K01886] [EC:6.1.1.18]
VV2803  
alaS; alanyl-tRNA synthetase [KO:K01872] [EC:6.1.1.7]
VV2288  
aspS; aspartyl-tRNA synthetase [KO:K01876] [EC:6.1.1.12]
VV2090  
asnC; asparaginyl-tRNA synthetase [KO:K01893] [EC:6.1.1.22]
VV0021  
glyQ; glycyl-tRNA synthetase subunit alpha [KO:K01878] [EC:6.1.1.14]
VV0020  
glyS; glycyl-tRNA synthetase subunit beta [KO:K01879] [EC:6.1.1.14]
VV1945  
threonyl-tRNA synthetase; K01868 threonyl-tRNA synthetase [EC:6.1.1.3] [KO:K01868] [EC:6.1.1.3]
VV1325  
seryl-tRNA synthetase; K01875 seryl-tRNA synthetase [EC:6.1.1.11] [KO:K01875] [EC:6.1.1.11]
VV1362  
cysS; cysteinyl-tRNA synthetase [KO:K01883] [EC:6.1.1.16]
VV1259  
metG; methionyl-tRNA synthetase [KO:K01874] [EC:6.1.1.10]
VV3226  
fmt; methionyl-tRNA formyltransferase [KO:K00604] [EC:2.1.2.9]
VV2910  
valS; valyl-tRNA synthetase [KO:K01873] [EC:6.1.1.9]
VV0911  
leuS; leucyl-tRNA synthetase [KO:K01869] [EC:6.1.1.4]
VV0687  
ileS; isoleucyl-tRNA synthetase [KO:K01870] [EC:6.1.1.5]
VV0669  
lysS; lysyl-tRNA synthetase [KO:K04567] [EC:6.1.1.6]
VV3096  
lysyl-tRNA synthetase; K04568 lysyl-tRNA synthetase, class II [EC:6.1.1.6] [KO:K04568] [EC:6.1.1.6]
VV1044  
argS; arginyl-tRNA synthetase [KO:K01887] [EC:6.1.1.19]
VV2572  
prolyl-tRNA synthetase; K01881 prolyl-tRNA synthetase [EC:6.1.1.15] [KO:K01881] [EC:6.1.1.15]
VV0767  
hisS; histidyl-tRNA synthetase [KO:K01892] [EC:6.1.1.21]
VV1971  
pheS; phenylalanyl-tRNA synthetase subunit alpha [KO:K01889] [EC:6.1.1.20]
VV1970  
pheT; phenylalanyl-tRNA synthetase subunit beta [KO:K01890] [EC:6.1.1.20]
tyrosyl-tRNA synthetase; K01866 tyrosyl-tRNA synthetase [EC:6.1.1.1] [KO:K01866] [EC:6.1.1.1]
VV2723  
tyrosyl-tRNA synthetase; K01866 tyrosyl-tRNA synthetase [EC:6.1.1.1] [KO:K01866] [EC:6.1.1.1]
VV3058  
tryptophanyl-tRNA synthetase; K01867 tryptophanyl-tRNA synthetase [EC:6.1.1.2] [KO:K01867] [EC:6.1.1.2]
Compound
C00025  
L-Glutamate
C00037  
Glycine
C00041  
L-Alanine
C00047  
L-Lysine
C00049  
L-Aspartate
C00062  
L-Arginine
C00064  
L-Glutamine
C00065  
L-Serine
C00073  
L-Methionine
C00078  
L-Tryptophan
C00079  
L-Phenylalanine
C00082  
L-Tyrosine
C00097  
L-Cysteine
C00101  
Tetrahydrofolate
C00123  
L-Leucine
C00135  
L-Histidine
C00148  
L-Proline
C00152  
L-Asparagine
C00183  
L-Valine
C00188  
L-Threonine
C00234  
10-Formyltetrahydrofolate
C00407  
L-Isoleucine
C00886  
L-Alanyl-tRNA
C01005  
O-Phospho-L-serine
C01931  
L-Lysyl-tRNA
C02047  
L-Leucyl-tRNA
C02163  
L-Arginyl-tRNA(Arg)
C02282  
Glutaminyl-tRNA
C02412  
Glycyl-tRNA(Gly)
C02430  
L-Methionyl-tRNA
C02553  
L-Seryl-tRNA(Ser)
C02554  
L-Valyl-tRNA(Val)
C02702  
L-Prolyl-tRNA(Pro)
C02839  
L-Tyrosyl-tRNA(Tyr)
C02984  
L-Aspartyl-tRNA(Asp)
C02987  
L-Glutamyl-tRNA(Glu)
C02988  
L-Histidyl-tRNA(His)
C02992  
L-Threonyl-tRNA(Thr)
C03125  
L-Cysteinyl-tRNA(Cys)
C03127  
L-Isoleucyl-tRNA(Ile)
C03294  
N-Formylmethionyl-tRNA
C03402  
L-Asparaginyl-tRNA(Asn)
C03511  
L-Phenylalanyl-tRNA(Phe)
C03512  
L-Tryptophanyl-tRNA(Trp)
C06112  
L-Glutamyl-tRNA(Gln)
C06113  
L-Aspartyl-tRNA(Asn)
C06481  
L-Seryl-tRNA(Sec)
C06482  
L-Selenocysteinyl-tRNA(Sec)
C16138  
L-Pyrrolysine
C16638  
O-Phosphoseryl-tRNA(Sec)
C17022  
O-Phosphoseryl-tRNA(Cys)
C17027  
L-Pyrrolysyl-tRNA(Pyl)
Reference
  Authors
Sheppard K, Yuan J, Hohn MJ, Jester B, Devine KM, Soll D
  Title
From one amino acid to another: tRNA-dependent amino acid biosynthesis.
  Journal
Nucleic Acids Res 36:1813-25 (2008)
Reference
  Authors
Polycarpo C, Ambrogelly A, Berube A, Winbush SM, McCloskey JA, Crain PF, Wood JL, Soll D
  Title
An aminoacyl-tRNA synthetase that specifically activates pyrrolysine.
  Journal
Proc Natl Acad Sci U S A 101:12450-4 (2004)
KO pathway
 

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