KEGG PATHWAY: xcc00240

PATHWAY: xcc00240

Entry

xcc00240 Pathway

Name

Pyrimidine metabolism - Xanthomonas campestris pv. campestris ATCC 33913

Class

Metabolism; Nucleotide metabolism

Pathway map

xcc00240

Pyrimidine metabolism

Module

xcc_M00046	Pyrimidine degradation, uracil => beta-alanine, thymine => 3-aminoisobutanoate [PATH:xcc00240]
xcc_M00051	Uridine monophosphate biosynthesis, glutamine (+ PRPP) => UMP [PATH:xcc00240]
xcc_M00052	Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:xcc00240]
xcc_M00053	Pyrimidine deoxyribonuleotide biosynthesis, CDP/CTP => dCDP/dCTP,dTDP/dTTP [PATH:xcc00240]

Other DBs

BSID:

8233

GO:

0006220

Organism

Xanthomonas campestris pv. campestris ATCC 33913 [GN:xcc]

Gene

XCC1843	carB; carbamoyl phosphate synthase large subunit [KO:K01955] [EC:6.3.5.5]
XCC1841	carA; carbamoyl phosphate synthase small subunit [KO:K01956] [EC:6.3.5.5]
XCC2746	pyrB; aspartate carbamoyltransferase [KO:K00609] [EC:2.1.3.2]
XCC2257	pyrC; dihydroorotase [KO:K01465] [EC:3.5.2.3]
XCC1788	pyrD; dihydroorotate dehydrogenase 2 [KO:K00226] [EC:1.3.98.1]
XCC3847	pyrE; orotate phosphoribosyltransferase [KO:K00762] [EC:2.4.2.10]
XCC4134	pyrF; orotidine 5'-phosphate decarboxylase [KO:K01591] [EC:4.1.1.23]
XCC2195	cmk; cytidylate kinase [KO:K00945] [EC:2.7.4.14]
XCC1371	pyrH; uridylate kinase [KO:K09903] [EC:2.7.4.22]
XCC1981	ndk; nucleoside diphosphate kinase [KO:K00940] [EC:2.7.4.6]
XCC2507	pnp; polynucleotide phosphorylase [KO:K00962] [EC:2.7.7.8]
XCC3253	deoxyribonucleotide triphosphate pyrophosphatase; K02428 dITP/XTP pyrophosphatase [EC:3.6.1.19] [KO:K02428] [EC:3.6.1.19]
XCC1697	pyrG; CTP synthetase [KO:K01937] [EC:6.3.4.2]
XCC0919	rpoA; DNA-directed RNA polymerase subunit alpha [KO:K03040] [EC:2.7.7.6]
XCC0888	rpoB; DNA-directed RNA polymerase subunit beta [KO:K03043] [EC:2.7.7.6]
XCC0889	rpoC; DNA-directed RNA polymerase subunit beta' [KO:K03046] [EC:2.7.7.6]
XCC3248	rpoZ; DNA-directed RNA polymerase subunit omega [KO:K03060] [EC:2.7.7.6]
XCC4020	polA; DNA polymerase I [KO:K02335] [EC:2.7.7.7]
XCC1358	dnaE; DNA polymerase III subunit alpha [KO:K02337] [EC:2.7.7.7]
XCC0002	dnaN; DNA polymerase III subunit beta [KO:K02338] [EC:2.7.7.7]
XCC1001	dnaX; DNA polymerase III subunits gamma and tau [KO:K02343] [EC:2.7.7.7]
XCC2617	holA; DNA polymerase III subunit delta [KO:K02340] [EC:2.7.7.7]
XCC1023	holB; DNA polymerase III subunit delta' [KO:K02341] [EC:2.7.7.7]
XCC0988	dnaQ; DNA polymerase III subunit epsilon [KO:K02342] [EC:2.7.7.7]
XCC0648	holC; DNA polymerase III subunit chi [KO:K02339] [EC:2.7.7.7]
XCC2570	dcd; deoxycytidine triphosphate deaminase [KO:K01494] [EC:3.5.4.13]
XCC1547	5'-nucleotidase; K01081 5'-nucleotidase [EC:3.1.3.5] [KO:K01081] [EC:3.1.3.5]
XCC1706	surE; stationary phase survival protein SurE [KO:K03787] [EC:3.1.3.5]
XCC2386	upp; uracil phosphoribosyltransferase [KO:K00761] [EC:2.4.2.9]
XCC3605	hypothetical protein; K09019 3-hydroxypropanoate dehydrogenase [EC:1.1.1.-] [KO:K09019] [EC:1.1.1.-]
XCC3491	codA; cytosine deaminase [KO:K01485] [EC:3.5.4.1]
XCC2881	mazG; nucleoside triphosphate pyrophosphohydrolase [KO:K04765] [EC:3.6.1.8]
XCC1971	trxB; thioredoxin reductase [KO:K00384] [EC:1.8.1.9]
XCC1084	trxB; thioredoxin reductase [KO:K00384] [EC:1.8.1.9]
XCC3986	nrdA; ribonucleotide-diphosphate reductase subunit alpha [KO:K00525] [EC:1.17.4.1]
XCC3985	nrdF; ribonucleotide-diphosphate reductase subunit beta [KO:K00526] [EC:1.17.4.1]
XCC3858	dut; deoxyuridine 5'-triphosphate nucleotidohydrolase [KO:K01520] [EC:3.6.1.23]
XCC0787	thyA; thymidylate synthase [KO:K00560] [EC:2.1.1.45]
XCC0126	deoxycytidylate deaminase; K01493 dCMP deaminase [EC:3.5.4.12] [KO:K01493] [EC:3.5.4.12]
XCC4143	tdk; thymidine kinase [KO:K00857] [EC:2.7.1.21]
XCC3931	tmk; thymidylate kinase [KO:K00943] [EC:2.7.4.9]

Compound

C00015	UDP
C00029	UDP-glucose
C00039	DNA
C00046	RNA
C00055	CMP
C00063	CTP
C00064	L-Glutamine
C00075	UTP
C00086	Urea
C00099	beta-Alanine
C00105	UMP
C00106	Uracil
C00112	CDP
C00119	5-Phospho-alpha-D-ribose 1-diphosphate
C00169	Carbamoyl phosphate
C00178	Thymine
C00214	Thymidine
C00222	3-Oxopropanoate
C00239	dCMP
C00295	Orotate
C00299	Uridine
C00337	(S)-Dihydroorotate
C00342	Thioredoxin
C00343	Thioredoxin disulfide
C00363	dTDP
C00364	dTMP
C00365	dUMP
C00380	Cytosine
C00383	Malonate
C00429	5,6-Dihydrouracil
C00438	N-Carbamoyl-L-aspartate
C00458	dCTP
C00459	dTTP
C00460	dUTP
C00475	Cytidine
C00526	Deoxyuridine
C00672	2-Deoxy-D-ribose 1-phosphate
C00705	dCDP
C00813	Barbiturate
C00881	Deoxycytidine
C00906	5,6-Dihydrothymine
C01013	3-Hydroxypropanoate
C01103	Orotidine 5'-phosphate
C01168	Pseudouridine 5'-phosphate
C01346	dUDP
C01368	3'-UMP
C01563	Carbamate
C02067	Pseudouridine
C02170	Methylmalonate
C02354	2',3'-Cyclic CMP
C02355	2',3'-Cyclic UMP
C02376	5-Methylcytosine
C02642	3-Ureidopropionate
C03997	5-Hydroxymethyldeoxycytidylate
C05100	3-Ureidoisobutyrate
C05145	3-Aminoisobutyric acid
C05281	5-Methylbarbiturate
C05822	3'-CMP
C06198	P1,P4-Bis(5'-uridyl) tetraphosphate
C11038	2'-Deoxy-5-hydroxymethylcytidine-5'-diphosphate
C11039	2'-Deoxy-5-hydroxymethylcytidine-5'-triphosphate
C15607	3-Oxo-3-ureidopropanoate
C20231	(Z)-3-Ureidoacrylate peracid
C20249	(Z)-3-Peroxyaminoacrylate
C20253	Aminoacrylate
C20254	Ureidoacrylate

KO pathway

ko00240

All links

Pathway (2)   
   KEGG MODULE (1)   
   BioSystems (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (41)   
   KEGG GENES (41)   
All databases (44)   

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