KEGG   PATHWAY: ypy01100
Entry
ypy01100                    Pathway                                
Name
Metabolic pathways - Yersinia pseudotuberculosis YPIII (serotype O:3)
Class
Pathway map
ypy01100  Metabolic pathways
ypy01100

Module
ypy_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:ypy01100]
ypy_M00002  Glycolysis, core module involving three-carbon compounds [PATH:ypy01100]
ypy_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:ypy01100]
ypy_M00004  Pentose phosphate pathway (Pentose phosphate cycle) [PATH:ypy01100]
ypy_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:ypy01100]
ypy_M00006  Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:ypy01100]
ypy_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:ypy01100]
ypy_M00008  Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:ypy01100]
ypy_M00009  Citrate cycle (TCA cycle, Krebs cycle) [PATH:ypy01100]
ypy_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:ypy01100]
ypy_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:ypy01100]
ypy_M00012  Glyoxylate cycle [PATH:ypy01100]
ypy_M00015  Proline biosynthesis, glutamate => proline [PATH:ypy01100]
ypy_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:ypy01100]
ypy_M00017  Methionine biosynthesis, aspartate => homoserine => methionine [PATH:ypy01100]
ypy_M00018  Threonine biosynthesis, aspartate => homoserine => threonine [PATH:ypy01100]
ypy_M00019  Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:ypy01100]
ypy_M00020  Serine biosynthesis, glycerate-3P => serine [PATH:ypy01100]
ypy_M00021  Cysteine biosynthesis, serine => cysteine [PATH:ypy01100]
ypy_M00022  Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:ypy01100]
ypy_M00023  Tryptophan biosynthesis, chorismate => tryptophan [PATH:ypy01100]
ypy_M00024  Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH:ypy01100]
ypy_M00025  Tyrosine biosynthesis, chorismate => HPP => tyrosine [PATH:ypy01100]
ypy_M00026  Histidine biosynthesis, PRPP => histidine [PATH:ypy01100]
ypy_M00028  Ornithine biosynthesis, glutamate => ornithine [PATH:ypy01100]
ypy_M00034  Methionine salvage pathway [PATH:ypy01100]
ypy_M00045  Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:ypy01100]
ypy_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:ypy01100]
ypy_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:ypy01100]
ypy_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:ypy01100]
ypy_M00051  De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP [PATH:ypy01100]
ypy_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:ypy01100]
ypy_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:ypy01100]
ypy_M00060  KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type [PATH:ypy01100]
ypy_M00061  D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH:ypy01100]
ypy_M00063  CMP-KDO biosynthesis [PATH:ypy01100]
ypy_M00064  ADP-L-glycero-D-manno-heptose biosynthesis [PATH:ypy01100]
ypy_M00082  Fatty acid biosynthesis, initiation [PATH:ypy01100]
ypy_M00083  Fatty acid biosynthesis, elongation [PATH:ypy01100]
ypy_M00086  beta-Oxidation, acyl-CoA synthesis [PATH:ypy01100]
ypy_M00087  beta-Oxidation [PATH:ypy01100]
ypy_M00093  Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:ypy01100]
ypy_M00115  NAD biosynthesis, aspartate => quinolinate => NAD [PATH:ypy01100]
ypy_M00116  Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol [PATH:ypy01100]
ypy_M00117  Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH:ypy01100]
ypy_M00118  Glutathione biosynthesis, glutamate => glutathione [PATH:ypy01100]
ypy_M00119  Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:ypy01100]
ypy_M00120  Coenzyme A biosynthesis, pantothenate => CoA [PATH:ypy01100]
ypy_M00121  Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:ypy01100]
ypy_M00123  Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:ypy01100]
ypy_M00124  Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH:ypy01100]
ypy_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:ypy01100]
ypy_M00126  Tetrahydrofolate biosynthesis, GTP => THF [PATH:ypy01100]
ypy_M00127  Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP [PATH:ypy01100]
ypy_M00144  NADH:quinone oxidoreductase, prokaryotes [PATH:ypy01100]
ypy_M00149  Succinate dehydrogenase, prokaryotes [PATH:ypy01100]
ypy_M00150  Fumarate reductase, prokaryotes [PATH:ypy01100]
ypy_M00157  F-type ATPase, prokaryotes and chloroplasts [PATH:ypy01100]
ypy_M00168  CAM (Crassulacean acid metabolism), dark [PATH:ypy01100]
ypy_M00176  Assimilatory sulfate reduction, sulfate => H2S [PATH:ypy01100]
ypy_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:ypy01100]
ypy_M00417  Cytochrome o ubiquinol oxidase [PATH:ypy01100]
ypy_M00432  Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:ypy01100]
ypy_M00530  Dissimilatory nitrate reduction, nitrate => ammonia [PATH:ypy01100]
ypy_M00533  Homoprotocatechuate degradation, homoprotocatechuate => 2-oxohept-3-enedioate [PATH:ypy01100]
ypy_M00549  Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:ypy01100]
ypy_M00554  Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:ypy01100]
ypy_M00555  Betaine biosynthesis, choline => betaine [PATH:ypy01100]
ypy_M00570  Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:ypy01100]
ypy_M00579  Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:ypy01100]
ypy_M00621  Glycine cleavage system [PATH:ypy01100]
ypy_M00631  D-Galacturonate degradation (bacteria), D-galacturonate => pyruvate + D-glyceraldehyde 3P [PATH:ypy01100]
ypy_M00632  Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:ypy01100]
ypy_M00761  Undecaprenylphosphate alpha-L-Ara4N biosynthesis, UDP-GlcA => undecaprenyl phosphate alpha-L-Ara4N [PATH:ypy01100]
ypy_M00844  Arginine biosynthesis, ornithine => arginine [PATH:ypy01100]
ypy_M00846  Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:ypy01100]
ypy_M00854  Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:ypy01100]
ypy_M00855  Glycogen degradation, glycogen => glucose-6P [PATH:ypy01100]
ypy_M00879  Arginine succinyltransferase pathway, arginine => glutamate [PATH:ypy01100]
ypy_M00880  Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:ypy01100]
ypy_M00881  Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:ypy01100]
ypy_M00909  UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:ypy01100]
ypy_M00918  Aerobactin biosynthesis, lysine => aerobactin [PATH:ypy01100]
ypy_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:ypy01100]
ypy_M00970  Proline degradation, proline => glutamate [PATH:ypy01100]
Organism
Yersinia pseudotuberculosis YPIII (serotype O:3) [GN:ypy]
Related
pathway
ypy00010  Glycolysis / Gluconeogenesis
ypy00020  Citrate cycle (TCA cycle)
ypy00030  Pentose phosphate pathway
ypy00040  Pentose and glucuronate interconversions
ypy00051  Fructose and mannose metabolism
ypy00052  Galactose metabolism
ypy00053  Ascorbate and aldarate metabolism
ypy00061  Fatty acid biosynthesis
ypy00071  Fatty acid degradation
ypy00130  Ubiquinone and other terpenoid-quinone biosynthesis
ypy00190  Oxidative phosphorylation
ypy00220  Arginine biosynthesis
ypy00230  Purine metabolism
ypy00240  Pyrimidine metabolism
ypy00250  Alanine, aspartate and glutamate metabolism
ypy00260  Glycine, serine and threonine metabolism
ypy00261  Monobactam biosynthesis
ypy00270  Cysteine and methionine metabolism
ypy00280  Valine, leucine and isoleucine degradation
ypy00290  Valine, leucine and isoleucine biosynthesis
ypy00300  Lysine biosynthesis
ypy00310  Lysine degradation
ypy00330  Arginine and proline metabolism
ypy00332  Carbapenem biosynthesis
ypy00340  Histidine metabolism
ypy00350  Tyrosine metabolism
ypy00360  Phenylalanine metabolism
ypy00361  Chlorocyclohexane and chlorobenzene degradation
ypy00362  Benzoate degradation
ypy00364  Fluorobenzoate degradation
ypy00380  Tryptophan metabolism
ypy00400  Phenylalanine, tyrosine and tryptophan biosynthesis
ypy00401  Novobiocin biosynthesis
ypy00410  beta-Alanine metabolism
ypy00430  Taurine and hypotaurine metabolism
ypy00440  Phosphonate and phosphinate metabolism
ypy00450  Selenocompound metabolism
ypy00460  Cyanoamino acid metabolism
ypy00470  D-Amino acid metabolism
ypy00480  Glutathione metabolism
ypy00500  Starch and sucrose metabolism
ypy00511  Other glycan degradation
ypy00520  Amino sugar and nucleotide sugar metabolism
ypy00521  Streptomycin biosynthesis
ypy00523  Polyketide sugar unit biosynthesis
ypy00525  Acarbose and validamycin biosynthesis
ypy00540  Lipopolysaccharide biosynthesis
ypy00541  O-Antigen nucleotide sugar biosynthesis
ypy00542  O-Antigen repeat unit biosynthesis
ypy00543  Exopolysaccharide biosynthesis
ypy00550  Peptidoglycan biosynthesis
ypy00552  Teichoic acid biosynthesis
ypy00561  Glycerolipid metabolism
ypy00562  Inositol phosphate metabolism
ypy00564  Glycerophospholipid metabolism
ypy00565  Ether lipid metabolism
ypy00592  alpha-Linolenic acid metabolism
ypy00600  Sphingolipid metabolism
ypy00620  Pyruvate metabolism
ypy00623  Toluene degradation
ypy00625  Chloroalkane and chloroalkene degradation
ypy00626  Naphthalene degradation
ypy00627  Aminobenzoate degradation
ypy00630  Glyoxylate and dicarboxylate metabolism
ypy00633  Nitrotoluene degradation
ypy00640  Propanoate metabolism
ypy00650  Butanoate metabolism
ypy00660  C5-Branched dibasic acid metabolism
ypy00670  One carbon pool by folate
ypy00680  Methane metabolism
ypy00730  Thiamine metabolism
ypy00740  Riboflavin metabolism
ypy00750  Vitamin B6 metabolism
ypy00760  Nicotinate and nicotinamide metabolism
ypy00770  Pantothenate and CoA biosynthesis
ypy00780  Biotin metabolism
ypy00785  Lipoic acid metabolism
ypy00790  Folate biosynthesis
ypy00860  Porphyrin metabolism
ypy00900  Terpenoid backbone biosynthesis
ypy00907  Pinene, camphor and geraniol degradation
ypy00910  Nitrogen metabolism
ypy00920  Sulfur metabolism
ypy00930  Caprolactam degradation
ypy00946  Degradation of flavonoids
ypy00997  Biosynthesis of various other secondary metabolites
ypy00999  Biosynthesis of various plant secondary metabolites
ypy01040  Biosynthesis of unsaturated fatty acids
ypy01053  Biosynthesis of siderophore group nonribosomal peptides
KO pathway
ko01100   

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Genome (1)   
   KEGG GENOME (1)   
Gene (786)   
   KEGG GENES (786)   
All databases (787)   

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